RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
TTC1-201ENST00000231238 ZFYVE9O95405 1425 aa13.38□□□□□ -0.27
TTC1-201ENST00000231238 A2ML1A8K2U0 1454 aa13.37□□□□□ -0.27
TTC1-201ENST00000231238 NBR1Q14596 966 aa13.37□□□□□ -0.27
TTC1-201ENST00000231238 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
TTC1-201ENST00000231238 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
TTC1-201ENST00000231238 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
TTC1-201ENST00000231238 PTPREP23469 700 aa13.36□□□□□ -0.27
TTC1-201ENST00000231238 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
TTC1-201ENST00000231238 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
TTC1-201ENST00000231238 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
TTC1-201ENST00000231238 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
TTC1-201ENST00000231238 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
TTC1-201ENST00000231238 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
TTC1-201ENST00000231238 IQGAP1P46940 1657 aa13.35□□□□□ -0.27
TTC1-201ENST00000231238 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
TTC1-201ENST00000231238 OSBPP22059 807 aa13.35□□□□□ -0.27
TTC1-201ENST00000231238 STK26Q9P289 416 aa13.35□□□□□ -0.27
TTC1-201ENST00000231238 C3P01024 1663 aa13.34□□□□□ -0.27
TTC1-201ENST00000231238 CNGB1Q14028 1251 aaPredicted RBP13.34□□□□□ -0.27
TTC1-201ENST00000231238 TESK2Q96S53 571 aa13.34□□□□□ -0.27
TTC1-201ENST00000231238 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
TTC1-201ENST00000231238 SEMA3EO15041 775 aa13.33□□□□□ -0.28
TTC1-201ENST00000231238 COL9A1P20849 921 aa13.33□□□□□ -0.28
TTC1-201ENST00000231238 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
TTC1-201ENST00000231238 C6orf132Q5T0Z8 1188 aa13.33□□□□□ -0.28
TTC1-201ENST00000231238 THEMISQ8N1K5 641 aaPredicted RBP13.33□□□□□ -0.28
TTC1-201ENST00000231238 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
TTC1-201ENST00000231238 POGKQ9P215 609 aa13.32□□□□□ -0.28
TTC1-201ENST00000231238 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
TTC1-201ENST00000231238 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
TTC1-201ENST00000231238 MMRN1Q13201 1228 aa13.3□□□□□ -0.28
TTC1-201ENST00000231238 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
TTC1-201ENST00000231238 TXNDC2Q86VQ3 553 aa13.3□□□□□ -0.28
TTC1-201ENST00000231238 TK2O00142 265 aa13.29□□□□□ -0.28
TTC1-201ENST00000231238 CENPBP07199 599 aaPredicted RBP13.29□□□□□ -0.28
TTC1-201ENST00000231238 ZBED2Q9BTP6 218 aa13.29□□□□□ -0.28
TTC1-201ENST00000231238 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
TTC1-201ENST00000231238 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
TTC1-201ENST00000231238 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
TTC1-201ENST00000231238 VPS9D1Q9Y2B5 631 aa13.29□□□□□ -0.28
TTC1-201ENST00000231238 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
TTC1-201ENST00000231238 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
TTC1-201ENST00000231238 PPP1R3GB7ZBB8 358 aa13.28□□□□□ -0.28
TTC1-201ENST00000231238 MAP3K7O43318 606 aa13.28□□□□□ -0.28
TTC1-201ENST00000231238 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
TTC1-201ENST00000231238 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.28
TTC1-201ENST00000231238 HRO43593 1189 aa13.27□□□□□ -0.29
TTC1-201ENST00000231238 SLC4A5Q9BY07 1137 aa13.27□□□□□ -0.29
TTC1-201ENST00000231238 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
TTC1-201ENST00000231238 ADAMTSL3P82987 1691 aa13.25□□□□□ -0.29
TTC1-201ENST00000231238 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
TTC1-201ENST00000231238 PRKRIP1Q9H875 184 aaPredicted RBP13.25□□□□□ -0.29
TTC1-201ENST00000231238 PANK3Q9H999 370 aa13.25□□□□□ -0.29
TTC1-201ENST00000231238 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
TTC1-201ENST00000231238 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
TTC1-201ENST00000231238 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
TTC1-201ENST00000231238 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
TTC1-201ENST00000231238 LTKP29376 864 aa13.23□□□□□ -0.29
TTC1-201ENST00000231238 PROX2Q3B8N5 592 aa13.23□□□□□ -0.29
TTC1-201ENST00000231238 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
TTC1-201ENST00000231238 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
TTC1-201ENST00000231238 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
TTC1-201ENST00000231238 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
TTC1-201ENST00000231238 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
TTC1-201ENST00000231238 SRPK2P78362 688 aaKnown RBP13.23□□□□□ -0.29
TTC1-201ENST00000231238 KTN1Q86UP2 1357 aaKnown RBP13.23□□□□□ -0.29
TTC1-201ENST00000231238 CDHR5Q9HBB8 845 aa13.23□□□□□ -0.29
TTC1-201ENST00000231238 CEP170BQ9Y4F5 1589 aaPredicted RBP13.23□□□□□ -0.29
TTC1-201ENST00000231238 ASXL1Q8IXJ9 1541 aa13.22□□□□□ -0.29
TTC1-201ENST00000231238 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
TTC1-201ENST00000231238 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.3
TTC1-201ENST00000231238 ARHGEF28Q8N1W1 1705 aaKnown RBP13.21□□□□□ -0.3
TTC1-201ENST00000231238 SLIT1O75093 1534 aa13.2□□□□□ -0.3
TTC1-201ENST00000231238 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
TTC1-201ENST00000231238 MRS2Q9HD23 443 aa13.2□□□□□ -0.3
TTC1-201ENST00000231238 PTPRMP28827 1452 aa13.2□□□□□ -0.3
TTC1-201ENST00000231238 METP08581 1390 aa13.19□□□□□ -0.3
TTC1-201ENST00000231238 ABCC11Q96J66 1382 aa13.19□□□□□ -0.3
TTC1-201ENST00000231238 RALBP1Q15311 655 aa13.19□□□□□ -0.3
TTC1-201ENST00000231238 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
TTC1-201ENST00000231238 CC2D1BQ5T0F9 858 aaKnown RBP13.18□□□□□ -0.3
TTC1-201ENST00000231238 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
TTC1-201ENST00000231238 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
TTC1-201ENST00000231238 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
TTC1-201ENST00000231238 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
TTC1-201ENST00000231238 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
TTC1-201ENST00000231238 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
TTC1-201ENST00000231238 ADAMTS13Q76LX8 1427 aa13.16□□□□□ -0.3
TTC1-201ENST00000231238 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
TTC1-201ENST00000231238 SETD1BQ9UPS6 1966 aaKnown RBP13.15□□□□□ -0.3
TTC1-201ENST00000231238 MYBBP1AQ9BQG0 1328 aaKnown RBP13.15□□□□□ -0.3
TTC1-201ENST00000231238 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
TTC1-201ENST00000231238 TRIM6-TRIM34B2RNG4 842 aa13.14□□□□□ -0.31
TTC1-201ENST00000231238 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
TTC1-201ENST00000231238 RNF166Q96A37 237 aaPredicted RBP13.14□□□□□ -0.31
TTC1-201ENST00000231238 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
TTC1-201ENST00000231238 SLC12A5Q9H2X9 1139 aa13.14□□□□□ -0.31
TTC1-201ENST00000231238 TSKSQ9UJT2 592 aa13.14□□□□□ -0.31
TTC1-201ENST00000231238 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms