RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 A0A1W2PP64 1363 aa21.08■□□□□ 0.96
GATC-201ENST00000229384 LRRC37A3O60309 1634 aa21.07■□□□□ 0.96
GATC-201ENST00000229384 BAG6P46379 1132 aa21.07■□□□□ 0.96
GATC-201ENST00000229384 FAM196AQ6ZSG2 479 aa21.07■□□□□ 0.96
GATC-201ENST00000229384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
GATC-201ENST00000229384 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
GATC-201ENST00000229384 EDC4Q6P2E9 1401 aaKnown RBP21.06■□□□□ 0.96
GATC-201ENST00000229384 ABCC6O95255 1503 aa21.06■□□□□ 0.96
GATC-201ENST00000229384 SOX12O15370 315 aa21.06■□□□□ 0.96
GATC-201ENST00000229384 EN1Q05925 392 aaPredicted RBP21.06■□□□□ 0.96
GATC-201ENST00000229384 WDR17Q8IZU2 1322 aa21.05■□□□□ 0.96
GATC-201ENST00000229384 TRIM37O94972 964 aa21.04■□□□□ 0.96
GATC-201ENST00000229384 HDGFL2Q7Z4V5 671 aaPredicted RBP21.04■□□□□ 0.96
GATC-201ENST00000229384 PDE3BQ13370 1112 aa21.03■□□□□ 0.96
GATC-201ENST00000229384 TOM1L2Q6ZVM7 507 aa21.02■□□□□ 0.96
GATC-201ENST00000229384 TERF2IPQ9NYB0 399 aa21.02■□□□□ 0.96
GATC-201ENST00000229384 OVOS2A0A0J9YW53 1432 aa21.02■□□□□ 0.96
GATC-201ENST00000229384 OVOS2Q6IE36 1432 aa21.02■□□□□ 0.96
GATC-201ENST00000229384 RREB1Q92766 1687 aa21.02■□□□□ 0.95
GATC-201ENST00000229384 USP47Q96K76 1375 aa21.01■□□□□ 0.95
GATC-201ENST00000229384 CAMKK2Q96RR4 588 aa21.01■□□□□ 0.95
GATC-201ENST00000229384 NINLQ9Y2I6 1382 aa21■□□□□ 0.95
GATC-201ENST00000229384 EZH2Q15910 746 aaKnown RBP21■□□□□ 0.95
GATC-201ENST00000229384 CARD10Q9BWT7 1032 aa20.99■□□□□ 0.95
GATC-201ENST00000229384 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
GATC-201ENST00000229384 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
GATC-201ENST00000229384 TIMELESSQ9UNS1 1208 aa20.98■□□□□ 0.95
GATC-201ENST00000229384 NUP188Q5SRE5 1749 aa20.98■□□□□ 0.95
GATC-201ENST00000229384 SRCAPQ6ZRS2 3230 aa20.96■□□□□ 0.95
GATC-201ENST00000229384 DDB1Q16531 1140 aa20.96■□□□□ 0.95
GATC-201ENST00000229384 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
GATC-201ENST00000229384 LRP5O75197 1615 aa20.96■□□□□ 0.95
GATC-201ENST00000229384 APBA3O96018 575 aa20.95■□□□□ 0.94
GATC-201ENST00000229384 ERBB3P21860 1342 aa20.95■□□□□ 0.94
GATC-201ENST00000229384 MYOM1P52179 1685 aa20.95■□□□□ 0.94
GATC-201ENST00000229384 ANKRD36BQ8N2N9 1353 aa20.95■□□□□ 0.94
GATC-201ENST00000229384 OVOS2A0A0G2JMS6 1433 aa20.95■□□□□ 0.94
GATC-201ENST00000229384 PSDA5PKW4 1024 aaPredicted RBP20.94■□□□□ 0.94
GATC-201ENST00000229384 MARCH10Q8NA82 808 aaPredicted RBP20.94■□□□□ 0.94
GATC-201ENST00000229384 CDCA7Q9BWT1 371 aaPredicted RBP20.94■□□□□ 0.94
GATC-201ENST00000229384 PARD3Q8TEW0 1356 aa20.94■□□□□ 0.94
GATC-201ENST00000229384 RGPD3A6NKT7 1758 aaPredicted RBP20.93■□□□□ 0.94
GATC-201ENST00000229384 RGPD4Q7Z3J3 1758 aa20.93■□□□□ 0.94
GATC-201ENST00000229384 CSB-PGBD3P0DP91 1061 aa20.93■□□□□ 0.94
GATC-201ENST00000229384 TMF1P82094 1093 aa20.93■□□□□ 0.94
GATC-201ENST00000229384 CCDC7Q96M83 1385 aa20.93■□□□□ 0.94
GATC-201ENST00000229384 BCL9O00512 1426 aa20.93■□□□□ 0.94
GATC-201ENST00000229384 RGPD2P0DJD1 1756 aa20.92■□□□□ 0.94
GATC-201ENST00000229384 C11orf95C9JLR9 678 aaPredicted RBP20.91■□□□□ 0.94
GATC-201ENST00000229384 PTF1AQ7RTS3 328 aa20.91■□□□□ 0.94
GATC-201ENST00000229384 FBLN1P23142 703 aa20.9■□□□□ 0.94
GATC-201ENST00000229384 KIF20BQ96Q89 1820 aa20.9■□□□□ 0.94
GATC-201ENST00000229384 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.94
GATC-201ENST00000229384 IP6K1Q92551 441 aa20.89■□□□□ 0.93
GATC-201ENST00000229384 TNS2Q63HR2 1409 aa20.88■□□□□ 0.93
GATC-201ENST00000229384 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
GATC-201ENST00000229384 ANKRD24Q8TF21 1146 aa20.88■□□□□ 0.93
GATC-201ENST00000229384 FYB1O15117 783 aa20.87■□□□□ 0.93
GATC-201ENST00000229384 COG3Q96JB2 828 aa20.87■□□□□ 0.93
GATC-201ENST00000229384 NLRP2Q9NX02 1062 aa20.87■□□□□ 0.93
GATC-201ENST00000229384 MAP3K19Q56UN5 1328 aa20.86■□□□□ 0.93
GATC-201ENST00000229384 EXOC5O00471 708 aa20.86■□□□□ 0.93
GATC-201ENST00000229384 PLSCR1O15162 318 aa20.85■□□□□ 0.93
GATC-201ENST00000229384 BCL11BQ9C0K0 894 aaPredicted RBP20.85■□□□□ 0.93
GATC-201ENST00000229384 NHSQ6T4R5 1651 aa20.84■□□□□ 0.93
GATC-201ENST00000229384 IL2RBP14784 551 aa20.83■□□□□ 0.93
GATC-201ENST00000229384 HOXC9P31274 260 aa20.83■□□□□ 0.93
GATC-201ENST00000229384 CDCA8Q53HL2 280 aa20.83■□□□□ 0.93
GATC-201ENST00000229384 CARD14Q9BXL6 1004 aa20.83■□□□□ 0.93
GATC-201ENST00000229384 SHANK3Q9BYB0 1731 aa20.82■□□□□ 0.92
GATC-201ENST00000229384 PROM2Q8N271 834 aa20.82■□□□□ 0.92
GATC-201ENST00000229384 GGNBP2Q9H3C7 697 aa20.82■□□□□ 0.92
GATC-201ENST00000229384 KAT6BQ8WYB5 2073 aa20.8■□□□□ 0.92
GATC-201ENST00000229384 KCNQ2O43526 872 aa20.79■□□□□ 0.92
GATC-201ENST00000229384 RRS1Q15050 365 aaKnown RBP20.79■□□□□ 0.92
GATC-201ENST00000229384 LTV1Q96GA3 475 aaPredicted RBP20.79■□□□□ 0.92
GATC-201ENST00000229384 BTAF1O14981 1849 aa20.78■□□□□ 0.92
GATC-201ENST00000229384 RTL1A6NKG5 1358 aa20.78■□□□□ 0.92
GATC-201ENST00000229384 AMPHP49418 695 aa20.77■□□□□ 0.92
GATC-201ENST00000229384 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
GATC-201ENST00000229384 CASZ1Q86V15 1759 aa20.76■□□□□ 0.91
GATC-201ENST00000229384 NSD3Q9BZ95 1437 aa20.76■□□□□ 0.91
GATC-201ENST00000229384 ANKRD26Q9UPS8 1709 aa20.75■□□□□ 0.91
GATC-201ENST00000229384 NBPF14Q5TI25 921 aa20.75■□□□□ 0.91
GATC-201ENST00000229384 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
GATC-201ENST00000229384 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
GATC-201ENST00000229384 MEGF6O75095 1541 aa20.73■□□□□ 0.91
GATC-201ENST00000229384 ACSBG1Q96GR2 724 aa20.73■□□□□ 0.91
GATC-201ENST00000229384 HSPA5P11021 654 aaKnown RBP20.72■□□□□ 0.91
GATC-201ENST00000229384 TXNRD1Q16881 649 aa20.72■□□□□ 0.91
GATC-201ENST00000229384 NBPF6Q5VWK0 638 aa20.72■□□□□ 0.91
GATC-201ENST00000229384 NBPF4Q96M43 638 aa20.72■□□□□ 0.91
GATC-201ENST00000229384 HSP90AB2PQ58FF8 381 aa20.71■□□□□ 0.91
GATC-201ENST00000229384 INSRP06213 1382 aa20.71■□□□□ 0.91
GATC-201ENST00000229384 KIF24Q5T7B8 1368 aa20.71■□□□□ 0.91
GATC-201ENST00000229384 EIF4G2P78344 907 aaKnown RBP eCLIP20.7■□□□□ 0.9
GATC-201ENST00000229384 PAPPAQ13219 1627 aa20.7■□□□□ 0.9
GATC-201ENST00000229384 DOT1LQ8TEK3 1739 aa20.7■□□□□ 0.9
GATC-201ENST00000229384 FLT4P35916 1363 aa20.69■□□□□ 0.9
GATC-201ENST00000229384 DDX54Q8TDD1 881 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms