RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ATP7BP35670 1465 aa22.03■■□□□ 1.12
PRPF19-201ENST00000227524 PRKCSHP14314 528 aaPredicted RBP22.02■■□□□ 1.12
PRPF19-201ENST00000227524 ZBTB40Q9NUA8 1239 aa22.02■■□□□ 1.12
PRPF19-201ENST00000227524 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.12
PRPF19-201ENST00000227524 KIF16BQ96L93 1317 aa22.01■■□□□ 1.11
PRPF19-201ENST00000227524 FYB1O15117 783 aa22.01■■□□□ 1.11
PRPF19-201ENST00000227524 TBX22Q9Y458 520 aa22.01■■□□□ 1.11
PRPF19-201ENST00000227524 ZNF142P52746 1687 aaPredicted RBP22■■□□□ 1.11
PRPF19-201ENST00000227524 RIPK4P57078 832 aa22■■□□□ 1.11
PRPF19-201ENST00000227524 DIP2AQ14689 1571 aa22■■□□□ 1.11
PRPF19-201ENST00000227524 FSD2A1L4K1 749 aa21.99■■□□□ 1.11
PRPF19-201ENST00000227524 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
PRPF19-201ENST00000227524 HDGFL2Q7Z4V5 671 aaPredicted RBP21.98■■□□□ 1.11
PRPF19-201ENST00000227524 HSCBQ8IWL3 235 aa21.98■■□□□ 1.11
PRPF19-201ENST00000227524 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
PRPF19-201ENST00000227524 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
PRPF19-201ENST00000227524 GOLGA6L3A6NEY3 463 aa21.98■■□□□ 1.11
PRPF19-201ENST00000227524 IPO8O15397 1037 aaKnown RBP21.98■■□□□ 1.11
PRPF19-201ENST00000227524 NCOA3Q9Y6Q9 1424 aa21.98■■□□□ 1.11
PRPF19-201ENST00000227524 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
PRPF19-201ENST00000227524 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
PRPF19-201ENST00000227524 NUCB1Q02818 461 aa21.97■■□□□ 1.11
PRPF19-201ENST00000227524 PRR36Q9H6K5 1346 aa21.97■■□□□ 1.11
PRPF19-201ENST00000227524 DIAPH1O60610 1272 aaKnown RBP21.97■■□□□ 1.11
PRPF19-201ENST00000227524 NUDT16Q96DE0 195 aaKnown RBP21.97■■□□□ 1.11
PRPF19-201ENST00000227524 RSPH6AQ9H0K4 717 aa21.97■■□□□ 1.11
PRPF19-201ENST00000227524 PNPLA6Q8IY17 1366 aa21.96■■□□□ 1.11
PRPF19-201ENST00000227524 ALDH1L2Q3SY69 923 aa21.96■■□□□ 1.11
PRPF19-201ENST00000227524 ZNF692Q9BU19 519 aaPredicted RBP21.96■■□□□ 1.11
PRPF19-201ENST00000227524 RRAGDQ9NQL2 400 aaPredicted RBP21.96■■□□□ 1.11
PRPF19-201ENST00000227524 SETD1BQ9UPS6 1966 aaKnown RBP21.96■■□□□ 1.11
PRPF19-201ENST00000227524 XRCC6P12956 609 aaKnown RBP eCLIP21.95■■□□□ 1.1
PRPF19-201ENST00000227524 PNNQ9H307 717 aaKnown RBP21.95■■□□□ 1.1
PRPF19-201ENST00000227524 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
PRPF19-201ENST00000227524 PTCH1Q13635 1447 aa21.95■■□□□ 1.1
PRPF19-201ENST00000227524 XRN1Q8IZH2 1706 aaKnown RBP21.95■■□□□ 1.1
PRPF19-201ENST00000227524 RBM25P49756 843 aaKnown RBP21.95■■□□□ 1.1
PRPF19-201ENST00000227524 TRAK2O60296 914 aa21.94■■□□□ 1.1
PRPF19-201ENST00000227524 GZF1Q9H116 711 aaPredicted RBP21.94■■□□□ 1.1
PRPF19-201ENST00000227524 ARXQ96QS3 562 aa21.93■■□□□ 1.1
PRPF19-201ENST00000227524 CCDC61Q9Y6R9 512 aa21.93■■□□□ 1.1
PRPF19-201ENST00000227524 MON2Q7Z3U7 1717 aa21.93■■□□□ 1.1
PRPF19-201ENST00000227524 AKAP12Q02952 1782 aa21.93■■□□□ 1.1
PRPF19-201ENST00000227524 LNPKQ9C0E8 428 aa21.92■■□□□ 1.1
PRPF19-201ENST00000227524 TOPAZ1Q8N9V7 1692 aa21.92■■□□□ 1.1
PRPF19-201ENST00000227524 DDIT3P35638 169 aa21.92■■□□□ 1.1
PRPF19-201ENST00000227524 CHD1LQ86WJ1 897 aa21.91■■□□□ 1.1
PRPF19-201ENST00000227524 SNX21Q969T3 373 aa21.91■■□□□ 1.1
PRPF19-201ENST00000227524 DDX11L8A8MPP1 907 aa21.9■■□□□ 1.1
PRPF19-201ENST00000227524 EDC4Q6P2E9 1401 aaKnown RBP21.9■■□□□ 1.1
PRPF19-201ENST00000227524 EIF5BO60841 1220 aaKnown RBP21.89■■□□□ 1.1
PRPF19-201ENST00000227524 BRPF1P55201 1214 aaPredicted RBP21.89■■□□□ 1.1
PRPF19-201ENST00000227524 FCHSD2O94868 740 aa21.89■■□□□ 1.09
PRPF19-201ENST00000227524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.89■■□□□ 1.09
PRPF19-201ENST00000227524 ITSN1Q15811 1721 aa21.89■■□□□ 1.09
PRPF19-201ENST00000227524 PANK2Q9BZ23 570 aa21.88■■□□□ 1.09
PRPF19-201ENST00000227524 BMP2KLQ5H9B9 411 aa21.88■■□□□ 1.09
PRPF19-201ENST00000227524 ZNF428Q96B54 188 aa21.88■■□□□ 1.09
PRPF19-201ENST00000227524 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
PRPF19-201ENST00000227524 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
PRPF19-201ENST00000227524 MAP2P11137 1827 aaKnown RBP21.85■■□□□ 1.09
PRPF19-201ENST00000227524 ZBTB7BO15156 539 aaPredicted RBP21.84■■□□□ 1.09
PRPF19-201ENST00000227524 KCNA6P17658 529 aa21.84■■□□□ 1.09
PRPF19-201ENST00000227524 MRE11P49959 708 aa21.84■■□□□ 1.09
PRPF19-201ENST00000227524 ANKLE2Q86XL3 938 aa21.84■■□□□ 1.09
PRPF19-201ENST00000227524 GCC1Q96CN9 775 aa21.84■■□□□ 1.09
PRPF19-201ENST00000227524 NRKQ7Z2Y5 1582 aa21.84■■□□□ 1.09
PRPF19-201ENST00000227524 CHD2O14647 1828 aaKnown RBP21.84■■□□□ 1.09
PRPF19-201ENST00000227524 CIZ1Q9ULV3 898 aaPredicted RBP21.84■■□□□ 1.09
PRPF19-201ENST00000227524 NME9Q86XW9 330 aa21.83■■□□□ 1.09
PRPF19-201ENST00000227524 MRPL50Q8N5N7 158 aaKnown RBP21.83■■□□□ 1.09
PRPF19-201ENST00000227524 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
PRPF19-201ENST00000227524 HSP90AB1P08238 724 aaKnown RBP21.82■■□□□ 1.08
PRPF19-201ENST00000227524 ANKRD45Q5TZF3 282 aa21.82■■□□□ 1.08
PRPF19-201ENST00000227524 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
PRPF19-201ENST00000227524 FBLN1P23142 703 aa21.82■■□□□ 1.08
PRPF19-201ENST00000227524 NFE2L2Q16236 605 aa21.82■■□□□ 1.08
PRPF19-201ENST00000227524 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
PRPF19-201ENST00000227524 TNPO1Q92973 898 aaKnown RBP21.82■■□□□ 1.08
PRPF19-201ENST00000227524 KIF2CQ99661 725 aa21.82■■□□□ 1.08
PRPF19-201ENST00000227524 PLEKHG3A1L390 1219 aa21.81■■□□□ 1.08
PRPF19-201ENST00000227524 VAMP4O75379 141 aa21.81■■□□□ 1.08
PRPF19-201ENST00000227524 ZRANB1Q9UGI0 708 aa21.81■■□□□ 1.08
PRPF19-201ENST00000227524 RGPD8O14715 1765 aaPredicted RBP21.81■■□□□ 1.08
PRPF19-201ENST00000227524 C1orf115Q9H7X2 142 aa21.81■■□□□ 1.08
PRPF19-201ENST00000227524 POLKQ9UBT6 870 aa21.81■■□□□ 1.08
PRPF19-201ENST00000227524 GRPEL1Q9HAV7 217 aa21.8■■□□□ 1.08
PRPF19-201ENST00000227524 ISY1Q9ULR0 285 aaKnown RBP21.8■■□□□ 1.08
PRPF19-201ENST00000227524 ACEP12821 1306 aa21.79■■□□□ 1.08
PRPF19-201ENST00000227524 DLG5Q8TDM6 1919 aa21.79■■□□□ 1.08
PRPF19-201ENST00000227524 RAB3GAP1Q15042 981 aa21.79■■□□□ 1.08
PRPF19-201ENST00000227524 PHACTR3Q96KR7 559 aa21.79■■□□□ 1.08
PRPF19-201ENST00000227524 ABCC4O15439 1325 aa21.79■■□□□ 1.08
PRPF19-201ENST00000227524 CALD1Q05682 793 aaKnown RBP21.78■■□□□ 1.08
PRPF19-201ENST00000227524 THUMPD2Q9BTF0 503 aaKnown RBP21.78■■□□□ 1.08
PRPF19-201ENST00000227524 TBC1D9Q6ZT07 1266 aa21.78■■□□□ 1.08
PRPF19-201ENST00000227524 TSPYL6Q8N831 410 aa21.78■■□□□ 1.08
PRPF19-201ENST00000227524 GBP4Q96PP9 640 aa21.78■■□□□ 1.08
PRPF19-201ENST00000227524 IFT57Q9NWB7 429 aa21.77■■□□□ 1.08
PRPF19-201ENST00000227524 HMOX1P09601 288 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms