RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.56
UBE2D4-201ENST00000222402 DDX11L8A8MPP1 907 aa18.52■□□□□ 0.56
UBE2D4-201ENST00000222402 FKBP5Q13451 457 aaPredicted RBP18.52■□□□□ 0.56
UBE2D4-201ENST00000222402 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
UBE2D4-201ENST00000222402 AEBP1Q8IUX7 1158 aa18.52■□□□□ 0.56
UBE2D4-201ENST00000222402 SMC5Q8IY18 1101 aa18.52■□□□□ 0.56
UBE2D4-201ENST00000222402 ZFYVE9O95405 1425 aa18.52■□□□□ 0.55
UBE2D4-201ENST00000222402 TRIM6-TRIM34B2RNG4 842 aa18.51■□□□□ 0.55
UBE2D4-201ENST00000222402 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
UBE2D4-201ENST00000222402 NUCB1Q02818 461 aa18.51■□□□□ 0.55
UBE2D4-201ENST00000222402 OS9Q13438 667 aaPredicted RBP18.51■□□□□ 0.55
UBE2D4-201ENST00000222402 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
UBE2D4-201ENST00000222402 NRXN1Q9ULB1 1477 aa18.5■□□□□ 0.55
UBE2D4-201ENST00000222402 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.5■□□□□ 0.55
UBE2D4-201ENST00000222402 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
UBE2D4-201ENST00000222402 ACEP12821 1306 aa18.49■□□□□ 0.55
UBE2D4-201ENST00000222402 MCM4P33991 863 aa18.49■□□□□ 0.55
UBE2D4-201ENST00000222402 HSP90AB2PQ58FF8 381 aa18.49■□□□□ 0.55
UBE2D4-201ENST00000222402 MROH1Q8NDA8 1641 aa18.49■□□□□ 0.55
UBE2D4-201ENST00000222402 TULP4Q9NRJ4 1543 aa18.48■□□□□ 0.55
UBE2D4-201ENST00000222402 TRAK2O60296 914 aa18.48■□□□□ 0.55
UBE2D4-201ENST00000222402 IL13P35225 146 aa18.48■□□□□ 0.55
UBE2D4-201ENST00000222402 TPRNQ4KMQ1 711 aa18.48■□□□□ 0.55
UBE2D4-201ENST00000222402 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
UBE2D4-201ENST00000222402 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
UBE2D4-201ENST00000222402 INTS3Q68E01 1043 aaKnown RBP18.47■□□□□ 0.55
UBE2D4-201ENST00000222402 ARHGAP45Q92619 1136 aa18.47■□□□□ 0.55
UBE2D4-201ENST00000222402 RILPL2Q969X0 211 aa18.47■□□□□ 0.55
UBE2D4-201ENST00000222402 ARHGAP31Q2M1Z3 1444 aa18.47■□□□□ 0.55
UBE2D4-201ENST00000222402 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
UBE2D4-201ENST00000222402 MCCP23508 829 aa18.46■□□□□ 0.55
UBE2D4-201ENST00000222402 MYOM1P52179 1685 aa18.46■□□□□ 0.55
UBE2D4-201ENST00000222402 ST18O60284 1047 aa18.46■□□□□ 0.55
UBE2D4-201ENST00000222402 ADGRB1O14514 1584 aa18.45■□□□□ 0.54
UBE2D4-201ENST00000222402 EIF4A2Q14240 407 aaKnown RBP18.45■□□□□ 0.54
UBE2D4-201ENST00000222402 BMP2KLQ5H9B9 411 aa18.45■□□□□ 0.54
UBE2D4-201ENST00000222402 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
UBE2D4-201ENST00000222402 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
UBE2D4-201ENST00000222402 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
UBE2D4-201ENST00000222402 ABTB2Q8N961 1025 aa18.44■□□□□ 0.54
UBE2D4-201ENST00000222402 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
UBE2D4-201ENST00000222402 USP19O94966 1318 aa18.44■□□□□ 0.54
UBE2D4-201ENST00000222402 TNRQ92752 1358 aa18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 FOXD4L5Q5VV16 416 aaPredicted RBP18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 FOXD4L4Q8WXT5 416 aaPredicted RBP18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 ZMYM3Q14202 1370 aa18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 REC8O95072 547 aa18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 F6X3S4 739 aa18.43■□□□□ 0.54
UBE2D4-201ENST00000222402 EDC4Q6P2E9 1401 aaKnown RBP18.42■□□□□ 0.54
UBE2D4-201ENST00000222402 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
UBE2D4-201ENST00000222402 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
UBE2D4-201ENST00000222402 NEURL4Q96JN8 1562 aa18.41■□□□□ 0.54
UBE2D4-201ENST00000222402 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
UBE2D4-201ENST00000222402 NEXMIFQ5QGS0 1516 aa18.4■□□□□ 0.54
UBE2D4-201ENST00000222402 K7ELQ4 463 aaPredicted RBP18.4■□□□□ 0.54
UBE2D4-201ENST00000222402 PTMSP20962 102 aa18.4■□□□□ 0.54
UBE2D4-201ENST00000222402 METP08581 1390 aa18.4■□□□□ 0.54
UBE2D4-201ENST00000222402 FRMPD1Q5SYB0 1578 aa18.39■□□□□ 0.53
UBE2D4-201ENST00000222402 TEFQ10587 303 aa18.39■□□□□ 0.53
UBE2D4-201ENST00000222402 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.53
UBE2D4-201ENST00000222402 NAP1L5Q96NT1 182 aaPredicted RBP18.39■□□□□ 0.53
UBE2D4-201ENST00000222402 GNAI2P04899 355 aa18.38■□□□□ 0.53
UBE2D4-201ENST00000222402 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
UBE2D4-201ENST00000222402 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
UBE2D4-201ENST00000222402 MEIS3Q99687 375 aa18.38■□□□□ 0.53
UBE2D4-201ENST00000222402 EXOC6BQ9Y2D4 811 aa18.38■□□□□ 0.53
UBE2D4-201ENST00000222402 IQSEC2Q5JU85 1478 aa18.37■□□□□ 0.53
UBE2D4-201ENST00000222402 DIP2CQ9Y2E4 1556 aa18.37■□□□□ 0.53
UBE2D4-201ENST00000222402 FOXO3O43524 673 aa18.37■□□□□ 0.53
UBE2D4-201ENST00000222402 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
UBE2D4-201ENST00000222402 PSME1Q06323 249 aa18.37■□□□□ 0.53
UBE2D4-201ENST00000222402 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
UBE2D4-201ENST00000222402 RABEP1Q15276 862 aa18.36■□□□□ 0.53
UBE2D4-201ENST00000222402 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
UBE2D4-201ENST00000222402 GNAI3P08754 354 aa18.36■□□□□ 0.53
UBE2D4-201ENST00000222402 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
UBE2D4-201ENST00000222402 PPLO60437 1756 aa18.36■□□□□ 0.53
UBE2D4-201ENST00000222402 KCNJ4P48050 445 aa18.35■□□□□ 0.53
UBE2D4-201ENST00000222402 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
UBE2D4-201ENST00000222402 UBTFL1P0CB47 393 aaPredicted RBP18.35■□□□□ 0.53
UBE2D4-201ENST00000222402 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
UBE2D4-201ENST00000222402 PTPRMP28827 1452 aa18.34■□□□□ 0.53
UBE2D4-201ENST00000222402 RBM33Q96EV2 1170 aaKnown RBP18.34■□□□□ 0.53
UBE2D4-201ENST00000222402 FOXD4L6Q3SYB3 417 aaPredicted RBP18.33■□□□□ 0.53
UBE2D4-201ENST00000222402 MCTP1Q6DN14 999 aa18.33■□□□□ 0.53
UBE2D4-201ENST00000222402 FOXD4L3Q6VB84 417 aaPredicted RBP18.33■□□□□ 0.53
UBE2D4-201ENST00000222402 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.53
UBE2D4-201ENST00000222402 ALKQ9UM73 1620 aa18.33■□□□□ 0.52
UBE2D4-201ENST00000222402 TSPOAP1O95153 1857 aa18.33■□□□□ 0.52
UBE2D4-201ENST00000222402 ANKRD44Q8N8A2 993 aa18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 TNPO1Q92973 898 aaKnown RBP18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 CIZ1Q9ULV3 898 aaPredicted RBP18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 PTPRCP08575 1304 aa18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 MTHFSDQ2M296 383 aaKnown RBP18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 MRE11P49959 708 aa18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
UBE2D4-201ENST00000222402 PIK3C2BO00750 1634 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms