RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.31
GABPB1-201ENST00000220429 KIF20BQ96Q89 1820 aa17.01■□□□□ 0.31
GABPB1-201ENST00000220429 CHRM1P11229 460 aaPredicted RBP17.01■□□□□ 0.31
GABPB1-201ENST00000220429 CABP1Q9NZU7 370 aa17■□□□□ 0.31
GABPB1-201ENST00000220429 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
GABPB1-201ENST00000220429 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
GABPB1-201ENST00000220429 ADGRB2O60241 1585 aa17■□□□□ 0.31
GABPB1-201ENST00000220429 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
GABPB1-201ENST00000220429 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
GABPB1-201ENST00000220429 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
GABPB1-201ENST00000220429 PPP1R9BQ96SB3 815 aa16.99■□□□□ 0.31
GABPB1-201ENST00000220429 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
GABPB1-201ENST00000220429 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
GABPB1-201ENST00000220429 DHX37Q8IY37 1157 aaKnown RBP16.98■□□□□ 0.31
GABPB1-201ENST00000220429 DNTTIP2Q5QJE6 756 aaKnown RBP16.98■□□□□ 0.31
GABPB1-201ENST00000220429 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
GABPB1-201ENST00000220429 METP08581 1390 aa16.97■□□□□ 0.31
GABPB1-201ENST00000220429 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
GABPB1-201ENST00000220429 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
GABPB1-201ENST00000220429 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.97■□□□□ 0.31
GABPB1-201ENST00000220429 DDX11L8A8MPP1 907 aa16.95■□□□□ 0.3
GABPB1-201ENST00000220429 ATP7BP35670 1465 aa16.95■□□□□ 0.3
GABPB1-201ENST00000220429 TNRQ92752 1358 aa16.95■□□□□ 0.3
GABPB1-201ENST00000220429 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
GABPB1-201ENST00000220429 UBR1Q8IWV7 1749 aa16.95■□□□□ 0.3
GABPB1-201ENST00000220429 ZBTB22O15209 634 aa16.94■□□□□ 0.3
GABPB1-201ENST00000220429 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
GABPB1-201ENST00000220429 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
GABPB1-201ENST00000220429 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
GABPB1-201ENST00000220429 CBX1P83916 185 aa16.93■□□□□ 0.3
GABPB1-201ENST00000220429 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
GABPB1-201ENST00000220429 SEC24BO95487 1268 aa16.93■□□□□ 0.3
GABPB1-201ENST00000220429 CHMP5Q9NZZ3 219 aa16.92■□□□□ 0.3
GABPB1-201ENST00000220429 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
GABPB1-201ENST00000220429 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
GABPB1-201ENST00000220429 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
GABPB1-201ENST00000220429 IRX3P78415 501 aaPredicted RBP16.91■□□□□ 0.3
GABPB1-201ENST00000220429 CGNQ9P2M7 1197 aaKnown RBP16.91■□□□□ 0.3
GABPB1-201ENST00000220429 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
GABPB1-201ENST00000220429 RARSP54136 660 aaKnown RBP16.91■□□□□ 0.3
GABPB1-201ENST00000220429 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
GABPB1-201ENST00000220429 SASS6Q6UVJ0 657 aa16.91■□□□□ 0.3
GABPB1-201ENST00000220429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.91■□□□□ 0.3
GABPB1-201ENST00000220429 TECPR2O15040 1411 aa16.9■□□□□ 0.3
GABPB1-201ENST00000220429 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
GABPB1-201ENST00000220429 CSPP1Q1MSJ5 1256 aa16.9■□□□□ 0.3
GABPB1-201ENST00000220429 SPRYD3Q8NCJ5 442 aa16.9■□□□□ 0.3
GABPB1-201ENST00000220429 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
GABPB1-201ENST00000220429 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
GABPB1-201ENST00000220429 CHMP4AQ9BY43 222 aa16.9■□□□□ 0.3
GABPB1-201ENST00000220429 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
GABPB1-201ENST00000220429 PPIP5K1Q6PFW1 1433 aa16.89■□□□□ 0.29
GABPB1-201ENST00000220429 CPS1P31327 1500 aa16.89■□□□□ 0.29
GABPB1-201ENST00000220429 NASPP49321 788 aaPredicted RBP16.89■□□□□ 0.29
GABPB1-201ENST00000220429 HS1BP3Q53T59 392 aa16.89■□□□□ 0.29
GABPB1-201ENST00000220429 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
GABPB1-201ENST00000220429 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
GABPB1-201ENST00000220429 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
GABPB1-201ENST00000220429 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
GABPB1-201ENST00000220429 FBLN1P23142 703 aa16.88■□□□□ 0.29
GABPB1-201ENST00000220429 PANK1Q8TE04 598 aa16.88■□□□□ 0.29
GABPB1-201ENST00000220429 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
GABPB1-201ENST00000220429 SIRT1Q96EB6 747 aa16.87■□□□□ 0.29
GABPB1-201ENST00000220429 TRIM35Q9UPQ4 493 aa16.87■□□□□ 0.29
GABPB1-201ENST00000220429 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
GABPB1-201ENST00000220429 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
GABPB1-201ENST00000220429 EDC4Q6P2E9 1401 aaKnown RBP16.86■□□□□ 0.29
GABPB1-201ENST00000220429 MON2Q7Z3U7 1717 aa16.86■□□□□ 0.29
GABPB1-201ENST00000220429 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
GABPB1-201ENST00000220429 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
GABPB1-201ENST00000220429 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
GABPB1-201ENST00000220429 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
GABPB1-201ENST00000220429 ADAMTS13Q76LX8 1427 aa16.85■□□□□ 0.29
GABPB1-201ENST00000220429 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
GABPB1-201ENST00000220429 BCL2L13Q9BXK5 485 aa16.85■□□□□ 0.29
GABPB1-201ENST00000220429 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
GABPB1-201ENST00000220429 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
GABPB1-201ENST00000220429 LRRC7Q96NW7 1537 aa16.84■□□□□ 0.29
GABPB1-201ENST00000220429 TSR2Q969E8 191 aaKnown RBP16.84■□□□□ 0.29
GABPB1-201ENST00000220429 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
GABPB1-201ENST00000220429 NME9Q86XW9 330 aa16.83■□□□□ 0.29
GABPB1-201ENST00000220429 TNNQ9UQP3 1299 aa16.83■□□□□ 0.29
GABPB1-201ENST00000220429 ROBO2Q9HCK4 1378 aa16.83■□□□□ 0.29
GABPB1-201ENST00000220429 SLC20A2Q08357 652 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
GABPB1-201ENST00000220429 ATP2B3Q16720 1220 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 TBC1D32Q96NH3 1257 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 IGHDP01880 384 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 RLBP1P12271 317 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 LTKP29376 864 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.83■□□□□ 0.28
GABPB1-201ENST00000220429 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
GABPB1-201ENST00000220429 SKOR2Q2VWA4 1001 aaPredicted RBP16.82■□□□□ 0.28
GABPB1-201ENST00000220429 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
GABPB1-201ENST00000220429 C3P01024 1663 aa16.82■□□□□ 0.28
GABPB1-201ENST00000220429 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
GABPB1-201ENST00000220429 CEBPAP49715 358 aaPredicted RBP16.82■□□□□ 0.28
GABPB1-201ENST00000220429 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
GABPB1-201ENST00000220429 FCHSD2O94868 740 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms