RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RGPD1P0DJD0 1748 aa38.25■■■■□ 3.71
PABPN1-201ENST00000216727 MAP3K19Q56UN5 1328 aa38.24■■■■□ 3.71
PABPN1-201ENST00000216727 SBNO1A3KN83 1393 aa38.24■■■■□ 3.71
PABPN1-201ENST00000216727 MS4A1P11836 297 aa38.24■■■■□ 3.71
PABPN1-201ENST00000216727 HSP90AB2PQ58FF8 381 aa38.24■■■■□ 3.71
PABPN1-201ENST00000216727 BCL2L13Q9BXK5 485 aa38.24■■■■□ 3.71
PABPN1-201ENST00000216727 COG6Q9Y2V7 657 aa38.22■■■■□ 3.71
PABPN1-201ENST00000216727 FLT4P35916 1363 aa38.22■■■■□ 3.71
PABPN1-201ENST00000216727 DLG5Q8TDM6 1919 aa38.2■■■■□ 3.71
PABPN1-201ENST00000216727 PHF8Q9UPP1 1060 aa38.2■■■■□ 3.71
PABPN1-201ENST00000216727 SULT6B1Q6IMI4 303 aa38.19■■■■□ 3.7
PABPN1-201ENST00000216727 CLUAP1Q96AJ1 413 aa38.19■■■■□ 3.7
PABPN1-201ENST00000216727 IFT57Q9NWB7 429 aa38.19■■■■□ 3.7
PABPN1-201ENST00000216727 NWD1Q149M9 1564 aa38.19■■■■□ 3.7
PABPN1-201ENST00000216727 ZKSCAN2Q63HK3 967 aa38.19■■■■□ 3.7
PABPN1-201ENST00000216727 NLRP6P59044 892 aa38.18■■■■□ 3.7
PABPN1-201ENST00000216727 GNAI1P63096 354 aa38.17■■■■□ 3.7
PABPN1-201ENST00000216727 ZNF428Q96B54 188 aa38.17■■■■□ 3.7
PABPN1-201ENST00000216727 KIF24Q5T7B8 1368 aa38.17■■■■□ 3.7
PABPN1-201ENST00000216727 MARF1Q9Y4F3 1742 aaKnown RBP38.17■■■■□ 3.7
PABPN1-201ENST00000216727 ZNF853P0CG23 659 aa38.17■■■■□ 3.7
PABPN1-201ENST00000216727 SMC4Q9NTJ3 1288 aa38.17■■■■□ 3.7
PABPN1-201ENST00000216727 ARHGEF10O15013 1369 aa38.17■■■■□ 3.7
PABPN1-201ENST00000216727 RLBP1P12271 317 aa38.16■■■■□ 3.7
PABPN1-201ENST00000216727 AEBP1Q8IUX7 1158 aa38.16■■■■□ 3.7
PABPN1-201ENST00000216727 SSH1Q8WYL5 1049 aa38.16■■■■□ 3.7
PABPN1-201ENST00000216727 SOX12O15370 315 aa38.16■■■■□ 3.7
PABPN1-201ENST00000216727 ALDH1L2Q3SY69 923 aa38.14■■■■□ 3.7
PABPN1-201ENST00000216727 THUMPD2Q9BTF0 503 aaKnown RBP38.12■■■■□ 3.69
PABPN1-201ENST00000216727 TNNQ9UQP3 1299 aa38.11■■■■□ 3.69
PABPN1-201ENST00000216727 ABTB2Q8N961 1025 aa38.11■■■■□ 3.69
PABPN1-201ENST00000216727 RBM33Q96EV2 1170 aaKnown RBP38.11■■■■□ 3.69
PABPN1-201ENST00000216727 CFAP44Q96MT7 982 aa38.1■■■■□ 3.69
PABPN1-201ENST00000216727 AMPHP49418 695 aa38.09■■■■□ 3.69
PABPN1-201ENST00000216727 DZIP1LQ8IYY4 767 aaKnown RBP38.09■■■■□ 3.69
PABPN1-201ENST00000216727 LAS1LQ9Y4W2 734 aaKnown RBP38.09■■■■□ 3.69
PABPN1-201ENST00000216727 BRPF1P55201 1214 aaPredicted RBP38.07■■■■□ 3.69
PABPN1-201ENST00000216727 KIF16BQ96L93 1317 aa38.07■■■■□ 3.69
PABPN1-201ENST00000216727 KDRP35968 1356 aa38.07■■■■□ 3.69
PABPN1-201ENST00000216727 MVPQ14764 893 aaKnown RBP38.07■■■■□ 3.68
PABPN1-201ENST00000216727 FTSJ3Q8IY81 847 aaKnown RBP38.05■■■■□ 3.68
PABPN1-201ENST00000216727 PAK3O75914 559 aaPredicted RBP38.05■■■■□ 3.68
PABPN1-201ENST00000216727 ATF7IPQ6VMQ6 1270 aa38.05■■■■□ 3.68
PABPN1-201ENST00000216727 MBIPQ9NS73 344 aa38.05■■■■□ 3.68
PABPN1-201ENST00000216727 IGSF1Q8N6C5 1336 aa38.04■■■■□ 3.68
PABPN1-201ENST00000216727 TRIM27P14373 513 aa38.04■■■■□ 3.68
PABPN1-201ENST00000216727 ESCO1Q5FWF5 840 aa38.03■■■■□ 3.68
PABPN1-201ENST00000216727 IPO8O15397 1037 aaKnown RBP38.02■■■■□ 3.68
PABPN1-201ENST00000216727 FAM83GA6ND36 823 aa38.02■■■■□ 3.68
PABPN1-201ENST00000216727 IGHDP01880 384 aa38.02■■■■□ 3.68
PABPN1-201ENST00000216727 C14orf37Q86TY3 774 aa38.02■■■■□ 3.68
PABPN1-201ENST00000216727 NOB1Q9ULX3 412 aaKnown RBP38.02■■■■□ 3.68
PABPN1-201ENST00000216727 VAMP4O75379 141 aa38.01■■■■□ 3.68
PABPN1-201ENST00000216727 PDE4AP27815 886 aa38.01■■■■□ 3.68
PABPN1-201ENST00000216727 NUTM2GQ5VZR2 741 aa38■■■■□ 3.67
PABPN1-201ENST00000216727 HOXC9P31274 260 aa38■■■■□ 3.67
PABPN1-201ENST00000216727 BACH2Q9BYV9 841 aa37.99■■■■□ 3.67
PABPN1-201ENST00000216727 RTL1A6NKG5 1358 aa37.99■■■■□ 3.67
PABPN1-201ENST00000216727 SKAP1Q86WV1 359 aa37.99■■■■□ 3.67
PABPN1-201ENST00000216727 EYA1Q99502 592 aa37.99■■■■□ 3.67
PABPN1-201ENST00000216727 PSME1Q06323 249 aa37.98■■■■□ 3.67
PABPN1-201ENST00000216727 DCTN1Q14203 1278 aa37.96■■■■□ 3.67
PABPN1-201ENST00000216727 PROSER2Q86WR7 435 aaPredicted RBP37.94■■■■□ 3.66
PABPN1-201ENST00000216727 DDX19BQ9UMR2 479 aa37.94■■■■□ 3.66
PABPN1-201ENST00000216727 PCDHB15Q9Y5E8 787 aa37.94■■■■□ 3.66
PABPN1-201ENST00000216727 TSPYL6Q8N831 410 aa37.93■■■■□ 3.66
PABPN1-201ENST00000216727 NFAT5O94916 1531 aa37.92■■■■□ 3.66
PABPN1-201ENST00000216727 TWISTNBQ3B726 338 aaPredicted RBP37.91■■■■□ 3.66
PABPN1-201ENST00000216727 ARHGAP45Q92619 1136 aa37.9■■■■□ 3.66
PABPN1-201ENST00000216727 MRPL50Q8N5N7 158 aaKnown RBP37.9■■■■□ 3.66
PABPN1-201ENST00000216727 CHL1O00533 1208 aa37.89■■■■□ 3.66
PABPN1-201ENST00000216727 MTHFSDQ2M296 383 aaKnown RBP37.88■■■■□ 3.65
PABPN1-201ENST00000216727 KCNH5Q8NCM2 988 aa37.88■■■■□ 3.65
PABPN1-201ENST00000216727 ORAI2Q96SN7 254 aa37.88■■■■□ 3.65
PABPN1-201ENST00000216727 C19orf44Q9H6X5 657 aa37.88■■■■□ 3.65
PABPN1-201ENST00000216727 LTN1O94822 1766 aa37.88■■■■□ 3.65
PABPN1-201ENST00000216727 C8orf58Q8NAV2 365 aa37.87■■■■□ 3.65
PABPN1-201ENST00000216727 GAS2L2Q8NHY3 880 aa37.87■■■■□ 3.65
PABPN1-201ENST00000216727 MCM10Q7L590 875 aa37.87■■■■□ 3.65
PABPN1-201ENST00000216727 RWDD1Q9H446 243 aaPredicted RBP37.86■■■■□ 3.65
PABPN1-201ENST00000216727 CRB1P82279 1406 aa37.86■■■■□ 3.65
PABPN1-201ENST00000216727 MSH5O43196 834 aa37.85■■■■□ 3.65
PABPN1-201ENST00000216727 ITPRIPQ8IWB1 547 aa37.85■■■■□ 3.65
PABPN1-201ENST00000216727 TMEM57Q8N5G2 664 aa37.85■■■■□ 3.65
PABPN1-201ENST00000216727 IP6K1Q92551 441 aa37.85■■■■□ 3.65
PABPN1-201ENST00000216727 PHRF1Q9P1Y6 1649 aaKnown RBP37.84■■■■□ 3.65
PABPN1-201ENST00000216727 HAP1P54257 671 aaPredicted RBP37.83■■■■□ 3.65
PABPN1-201ENST00000216727 KIF1AQ12756 1690 aa37.83■■■■□ 3.65
PABPN1-201ENST00000216727 KIAA0232Q92628 1395 aa37.83■■■■□ 3.65
PABPN1-201ENST00000216727 C1orf167Q5SNV9 1468 aa37.83■■■■□ 3.65
PABPN1-201ENST00000216727 FOXO3O43524 673 aa37.82■■■■□ 3.64
PABPN1-201ENST00000216727 HTATSF1O43719 755 aaKnown RBP37.82■■■■□ 3.64
PABPN1-201ENST00000216727 ELL2O00472 640 aaPredicted RBP37.81■■■■□ 3.64
PABPN1-201ENST00000216727 ANP32AP39687 249 aaKnown RBP37.81■■■■□ 3.64
PABPN1-201ENST00000216727 NCOA3Q9Y6Q9 1424 aa37.81■■■■□ 3.64
PABPN1-201ENST00000216727 RTF1Q92541 710 aaKnown RBP37.8■■■■□ 3.64
PABPN1-201ENST00000216727 RGS3P49796 1198 aa37.78■■■■□ 3.64
PABPN1-201ENST00000216727 ZBTB40Q9NUA8 1239 aa37.78■■■■□ 3.64
PABPN1-201ENST00000216727 SLIT3O75094 1523 aa37.78■■■■□ 3.64
PABPN1-201ENST00000216727 TRPM3Q9HCF6 1732 aaPredicted RBP37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms