RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 CFAP74Q9C0B2 1584 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 C14orf93Q9H972 538 aaKnown RBP7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 GPT2Q8TD30 523 aa7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 GBP4Q96PP9 640 aa7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 ZRANB1Q9UGI0 708 aa7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 ZSCAN23Q3MJ62 389 aa7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 BMP2KLQ5H9B9 411 aa7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 ZMYM3Q14202 1370 aa7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 KNDC1Q76NI1 1749 aa7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 COL3A1P02461 1466 aaPredicted RBP7.25□□□□□ -1.25
CEACAM1-201ENST00000161559 FAM177BA6PVY3 158 aa7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 PRPF40AO75400 957 aaKnown RBP7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 ZDHHC9Q9Y397 364 aa7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 C8orf58Q8NAV2 365 aa7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 VWDEQ8N2E2 1590 aa7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 CAMSAP1Q5T5Y3 1602 aa7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 NRXN1Q9ULB1 1477 aa7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 PRDM10Q9NQV6 1147 aa7.24□□□□□ -1.25
CEACAM1-201ENST00000161559 FANCAO15360 1455 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 ANKRD36BQ8N2N9 1353 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 POTEDQ86YR6 584 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 LMBRD1Q9NUN5 540 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 EFCAB6Q5THR3 1501 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 NPATQ14207 1427 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 INO80Q9ULG1 1556 aaPredicted RBP7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 SBNO2Q9Y2G9 1366 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 LRRC7Q96NW7 1537 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 SYCE3A1L190 88 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 VAMP4O75379 141 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 AAMPQ13685 434 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 GLI2P10070 1586 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 GLIPR1L2Q4G1C9 344 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 ZSCAN30Q86W11 494 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 PLEKHM2Q8IWE5 1019 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 C17orf53Q8N3J3 647 aaPredicted RBP7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 MRPL50Q8N5N7 158 aaKnown RBP7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 GDPD2Q9HCC8 539 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 EMILIN1Q9Y6C2 1016 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 NCKAP5LQ9HCH0 1330 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 PPLO60437 1756 aa7.23□□□□□ -1.25
CEACAM1-201ENST00000161559 PPP1R9BQ96SB3 815 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 MBIPQ9NS73 344 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 ADGRB3O60242 1522 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 ARHGEF28Q8N1W1 1705 aaKnown RBP7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 DIAPH1O60610 1272 aaKnown RBP7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 KLHL40Q2TBA0 621 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 ZNF830Q96NB3 372 aaPredicted RBP7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 EVC2Q86UK5 1308 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 KIF16BQ96L93 1317 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 ABCC11Q96J66 1382 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 ADGRL1O94910 1474 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 CCDC173Q0VFZ6 552 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 PRAM1Q96QH2 718 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 CABP1Q9NZU7 370 aa7.22□□□□□ -1.25
CEACAM1-201ENST00000161559 CD163L1Q9NR16 1453 aa7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 OFD1O75665 1012 aa7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 MSNP26038 577 aaKnown RBP7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 SIGLEC1Q9BZZ2 1709 aa7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 RIMBP3CA6NJZ7 1639 aa7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 RIMBP3BA6NNM3 1639 aa7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 RIMBP3Q9UFD9 1639 aa7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 CIZ1Q9ULV3 898 aaPredicted RBP7.21□□□□□ -1.26
CEACAM1-201ENST00000161559 MED14O60244 1454 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 KIDINS220Q9ULH0 1771 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 UQCRHLA0A096LP55 91 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 UQCRHP07919 91 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 SDSP20132 328 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 RRS1Q15050 365 aaKnown RBP7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 LARP6Q9BRS8 491 aaKnown RBP7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 USP26Q9BXU7 913 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 MIS18AQ9NYP9 233 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 IPO8O15397 1037 aaKnown RBP7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 CDC45O75419 566 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 CYP2E1P05181 493 aaPredicted RBP7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 STAC3Q96MF2 364 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 POLKQ9UBT6 870 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 USP32Q8NFA0 1604 aa7.2□□□□□ -1.26
CEACAM1-201ENST00000161559 SETBP1Q9Y6X0 1596 aa7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 CALD1Q05682 793 aaKnown RBP7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 SKOR2Q2VWA4 1001 aaPredicted RBP7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 TWISTNBQ3B726 338 aaPredicted RBP7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 WAPLQ7Z5K2 1190 aa7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 PALD1Q9ULE6 856 aa7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 TCHHQ07283 1943 aa7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 PDCL3Q9H2J4 239 aa7.19□□□□□ -1.26
CEACAM1-201ENST00000161559 UHRF1BP1LA0JNW5 1464 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 MYO5BQ9ULV0 1848 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 GADD45BO75293 160 aaPredicted RBP7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 TPM2P07951 284 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 CT47B1P0C2W7 299 aaPredicted RBP7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 IDI1Q13907 227 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 AEBP1Q8IUX7 1158 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 MEIS3Q99687 375 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 IL25Q9H293 177 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 ABCC4O15439 1325 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 ZNF445P59923 1031 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 NME9Q86XW9 330 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 GCC1Q96CN9 775 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms