RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CHMP4BQ9H444 224 aaKnown RBP24.66■■□□□ 1.54
PPP1R3F-201ENST00000055335 TERF2IPQ9NYB0 399 aa24.66■■□□□ 1.54
PPP1R3F-201ENST00000055335 FAM83GA6ND36 823 aa24.65■■□□□ 1.54
PPP1R3F-201ENST00000055335 TMEM63CQ9P1W3 806 aa24.65■■□□□ 1.54
PPP1R3F-201ENST00000055335 NOL7Q9UMY1 257 aaKnown RBP24.65■■□□□ 1.54
PPP1R3F-201ENST00000055335 PLCB2Q00722 1185 aa24.65■■□□□ 1.54
PPP1R3F-201ENST00000055335 USP26Q9BXU7 913 aa24.64■■□□□ 1.54
PPP1R3F-201ENST00000055335 IL16Q14005 1332 aa24.64■■□□□ 1.53
PPP1R3F-201ENST00000055335 INTS3Q68E01 1043 aaKnown RBP24.64■■□□□ 1.53
PPP1R3F-201ENST00000055335 CASC1Q6TDU7 716 aa24.64■■□□□ 1.53
PPP1R3F-201ENST00000055335 C8orf58Q8NAV2 365 aa24.64■■□□□ 1.53
PPP1R3F-201ENST00000055335 ERCC6L2Q5T890 1561 aa24.63■■□□□ 1.53
PPP1R3F-201ENST00000055335 JARID2Q92833 1246 aaPredicted RBP24.63■■□□□ 1.53
PPP1R3F-201ENST00000055335 GDPD2Q9HCC8 539 aa24.63■■□□□ 1.53
PPP1R3F-201ENST00000055335 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
PPP1R3F-201ENST00000055335 NEK4P51957 841 aa24.62■■□□□ 1.53
PPP1R3F-201ENST00000055335 TSC1Q92574 1164 aa24.62■■□□□ 1.53
PPP1R3F-201ENST00000055335 CABP1Q9NZU7 370 aa24.62■■□□□ 1.53
PPP1R3F-201ENST00000055335 SDSP20132 328 aa24.62■■□□□ 1.53
PPP1R3F-201ENST00000055335 TSHZ3Q63HK5 1081 aa24.62■■□□□ 1.53
PPP1R3F-201ENST00000055335 TTC22Q5TAA0 569 aa24.61■■□□□ 1.53
PPP1R3F-201ENST00000055335 ZNF830Q96NB3 372 aaPredicted RBP24.61■■□□□ 1.53
PPP1R3F-201ENST00000055335 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.61■■□□□ 1.53
PPP1R3F-201ENST00000055335 ZKSCAN5Q9Y2L8 839 aa24.61■■□□□ 1.53
PPP1R3F-201ENST00000055335 PRAM1Q96QH2 718 aa24.61■■□□□ 1.53
PPP1R3F-201ENST00000055335 ABCC1P33527 1531 aa24.61■■□□□ 1.53
PPP1R3F-201ENST00000055335 KRT24Q2M2I5 525 aa24.6■■□□□ 1.53
PPP1R3F-201ENST00000055335 HDGFL2Q7Z4V5 671 aaPredicted RBP24.6■■□□□ 1.53
PPP1R3F-201ENST00000055335 FCHSD2O94868 740 aa24.59■■□□□ 1.53
PPP1R3F-201ENST00000055335 MYOM2P54296 1465 aa24.59■■□□□ 1.53
PPP1R3F-201ENST00000055335 FAM177BA6PVY3 158 aa24.58■■□□□ 1.53
PPP1R3F-201ENST00000055335 ZDHHC9Q9Y397 364 aa24.58■■□□□ 1.53
PPP1R3F-201ENST00000055335 VGFO15240 615 aaPredicted RBP24.58■■□□□ 1.52
PPP1R3F-201ENST00000055335 GNAI1P63096 354 aa24.57■■□□□ 1.52
PPP1R3F-201ENST00000055335 EMILIN1Q9Y6C2 1016 aa24.57■■□□□ 1.52
PPP1R3F-201ENST00000055335 SLC4A10Q6U841 1118 aa24.56■■□□□ 1.52
PPP1R3F-201ENST00000055335 LRSAM1Q6UWE0 723 aa24.56■■□□□ 1.52
PPP1R3F-201ENST00000055335 NFE2L2Q16236 605 aa24.56■■□□□ 1.52
PPP1R3F-201ENST00000055335 API5Q9BZZ5 524 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-201ENST00000055335 NSD2O96028 1365 aa24.55■■□□□ 1.52
PPP1R3F-201ENST00000055335 CCDC39Q9UFE4 941 aa24.55■■□□□ 1.52
PPP1R3F-201ENST00000055335 CWC22Q9HCG8 908 aaKnown RBP24.54■■□□□ 1.52
PPP1R3F-201ENST00000055335 ZHX1Q9UKY1 873 aaPredicted RBP24.54■■□□□ 1.52
PPP1R3F-201ENST00000055335 ZFYVE16Q7Z3T8 1539 aa24.54■■□□□ 1.52
PPP1R3F-201ENST00000055335 CLEC17AQ6ZS10 378 aa24.54■■□□□ 1.52
PPP1R3F-201ENST00000055335 NCBP3Q53F19 620 aaKnown RBP24.54■■□□□ 1.52
PPP1R3F-201ENST00000055335 ZNF500O60304 480 aaPredicted RBP24.53■■□□□ 1.52
PPP1R3F-201ENST00000055335 C17orf53Q8N3J3 647 aaPredicted RBP24.53■■□□□ 1.52
PPP1R3F-201ENST00000055335 DCTPP1Q9H773 170 aa24.53■■□□□ 1.52
PPP1R3F-201ENST00000055335 TET3O43151 1660 aa24.52■■□□□ 1.52
PPP1R3F-201ENST00000055335 IBTKQ9P2D0 1353 aaPredicted RBP24.52■■□□□ 1.52
PPP1R3F-201ENST00000055335 REC8O95072 547 aa24.52■■□□□ 1.52
PPP1R3F-201ENST00000055335 CSPP1Q1MSJ5 1256 aa24.52■■□□□ 1.52
PPP1R3F-201ENST00000055335 PDLIM2Q96JY6 352 aa24.52■■□□□ 1.52
PPP1R3F-201ENST00000055335 CYP2E1P05181 493 aaPredicted RBP24.52■■□□□ 1.52
PPP1R3F-201ENST00000055335 FANCAO15360 1455 aa24.51■■□□□ 1.51
PPP1R3F-201ENST00000055335 DTNBO60941 627 aa24.51■■□□□ 1.51
PPP1R3F-201ENST00000055335 POLKQ9UBT6 870 aa24.51■■□□□ 1.51
PPP1R3F-201ENST00000055335 UPF3BQ9BZI7 483 aaKnown RBP24.51■■□□□ 1.51
PPP1R3F-201ENST00000055335 HS1BP3Q53T59 392 aa24.5■■□□□ 1.51
PPP1R3F-201ENST00000055335 RILPL2Q969X0 211 aa24.5■■□□□ 1.51
PPP1R3F-201ENST00000055335 TMX3Q96JJ7 454 aa24.5■■□□□ 1.51
PPP1R3F-201ENST00000055335 CDK19Q9BWU1 502 aa24.5■■□□□ 1.51
PPP1R3F-201ENST00000055335 ARHGAP45Q92619 1136 aa24.5■■□□□ 1.51
PPP1R3F-201ENST00000055335 TRIM6-TRIM34B2RNG4 842 aa24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 ZRANB1Q9UGI0 708 aa24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 ATP7AQ04656 1500 aa24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 RRS1Q15050 365 aaKnown RBP24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 MAP7D2Q96T17 732 aa24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 MEIS3Q99687 375 aa24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 TSPY26PQ9H489 355 aa24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 ANO2Q9NQ90 1003 aa24.49■■□□□ 1.51
PPP1R3F-201ENST00000055335 ZNF428Q96B54 188 aa24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 QRICH2Q9H0J4 1663 aa24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 ABCC4O15439 1325 aa24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 ERC2O15083 957 aa24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 SOX12O15370 315 aa24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 SASS6Q6UVJ0 657 aa24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 ADGRL1O94910 1474 aa24.48■■□□□ 1.51
PPP1R3F-201ENST00000055335 KIAA1210Q9ULL0 1709 aa24.47■■□□□ 1.51
PPP1R3F-201ENST00000055335 KIF1BO60333 1816 aa24.47■■□□□ 1.51
PPP1R3F-201ENST00000055335 KIAA2012Q0VF49 1180 aa24.47■■□□□ 1.51
PPP1R3F-201ENST00000055335 USP25Q9UHP3 1055 aa24.47■■□□□ 1.51
PPP1R3F-201ENST00000055335 LARP6Q9BRS8 491 aaKnown RBP24.47■■□□□ 1.51
PPP1R3F-201ENST00000055335 CFAP74Q9C0B2 1584 aa24.46■■□□□ 1.51
PPP1R3F-201ENST00000055335 TTC12Q9H892 705 aaPredicted RBP24.46■■□□□ 1.51
PPP1R3F-201ENST00000055335 IFT57Q9NWB7 429 aa24.46■■□□□ 1.51
PPP1R3F-201ENST00000055335 EXOC6BQ9Y2D4 811 aa24.46■■□□□ 1.51
PPP1R3F-201ENST00000055335 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
PPP1R3F-201ENST00000055335 GADD45BO75293 160 aaPredicted RBP24.46■■□□□ 1.51
PPP1R3F-201ENST00000055335 MIS18AQ9NYP9 233 aa24.45■■□□□ 1.51
PPP1R3F-201ENST00000055335 DYNC1I1O14576 645 aa24.45■■□□□ 1.5
PPP1R3F-201ENST00000055335 STAG3Q9UJ98 1225 aa24.45■■□□□ 1.5
PPP1R3F-201ENST00000055335 IDI1Q13907 227 aa24.44■■□□□ 1.5
PPP1R3F-201ENST00000055335 MROH2AA6NES4 1674 aa24.44■■□□□ 1.5
PPP1R3F-201ENST00000055335 ADGRB2O60241 1585 aa24.44■■□□□ 1.5
PPP1R3F-201ENST00000055335 CEP85Q6P2H3 762 aa24.44■■□□□ 1.5
PPP1R3F-201ENST00000055335 MBD3O95983 291 aa24.44■■□□□ 1.5
PPP1R3F-201ENST00000055335 TERF1P54274 439 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms