RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 OptnQ8K3K8 584 aa29.74■■■□□ 2.35
Pcf11-204ENSMUST00000208058 Apba2P98084 750 aa29.73■■■□□ 2.35
Pcf11-204ENSMUST00000208058 Tmem132eQ6IEE6 982 aa29.72■■■□□ 2.35
Pcf11-204ENSMUST00000208058 Prdm10Q3UTQ7 1184 aa29.71■■■□□ 2.35
Pcf11-204ENSMUST00000208058 Pak3Q61036 559 aa29.71■■■□□ 2.35
Pcf11-204ENSMUST00000208058 Cwc22Q8C5N3 908 aaKnown RBP29.71■■■□□ 2.35
Pcf11-204ENSMUST00000208058 Ginm1Q91WR6 327 aa29.69■■■□□ 2.34
Pcf11-204ENSMUST00000208058 Ddb1Q3U1J4 1140 aaKnown RBP29.68■■■□□ 2.34
Pcf11-204ENSMUST00000208058 Plekhd1B2RPU2 505 aa29.67■■■□□ 2.34
Pcf11-204ENSMUST00000208058 Zcrb1Q9CZ96 217 aaKnown RBP29.67■■■□□ 2.34
Pcf11-204ENSMUST00000208058 Lrit1Q8K099 624 aa29.66■■■□□ 2.34
Pcf11-204ENSMUST00000208058 Ptpn23Q6PB44 1692 aa29.65■■■□□ 2.34
Pcf11-204ENSMUST00000208058 Hoxc9P09633 260 aa29.64■■■□□ 2.34
Pcf11-204ENSMUST00000208058 Slc24a1Q91WD8 1130 aa29.64■■■□□ 2.34
Pcf11-204ENSMUST00000208058 GalcP54818 684 aa29.62■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Fam184bQ0KK56 942 aa29.62■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Zpr1Q62384 459 aa29.62■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Rab3gap2Q8BMG7 1366 aa29.62■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Sik1Q60670 779 aa29.61■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Arfgef2A2A5R2 1792 aa29.6■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Birc3O08863 600 aa29.6■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Smg6P61406 1418 aaKnown RBP29.6■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Ppfibp2O35711 882 aa29.59■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Col15a1O35206 1367 aa29.58■■■□□ 2.33
Pcf11-204ENSMUST00000208058 Adgrb1Q3UHD1 1582 aa29.58■■■□□ 2.33
Pcf11-204ENSMUST00000208058 IbtkQ6ZPR6 1352 aaKnown RBP29.57■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Hoxb7P09024 217 aa29.57■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Vars2Q3U2A8 1060 aa29.57■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Sin3aQ60520 1274 aaKnown RBP29.57■■■□□ 2.32
Pcf11-204ENSMUST00000208058 PrxO55103 1391 aa29.56■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Kcnh4A2A5F7 1018 aa29.55■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Exoc5Q3TPX4 708 aa29.55■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Zranb3Q6NZP1 1069 aa29.55■■■□□ 2.32
Pcf11-204ENSMUST00000208058 TkfcQ8VC30 578 aa29.55■■■□□ 2.32
Pcf11-204ENSMUST00000208058 NefmP08553 848 aa29.54■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Ahnak2E9PYB0 1738 aaKnown RBP29.54■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Erbb3Q61526 1339 aa29.52■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Ezh2Q61188 746 aaKnown RBP29.52■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Nsd3Q6P2L6 1439 aa29.52■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Snapc4Q8BP86 1333 aa29.51■■■□□ 2.32
Pcf11-204ENSMUST00000208058 Rad17Q6NXW6 688 aa29.51■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Tmf1B9EKI3 1091 aa29.5■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Pnpla7A2AJ88 1352 aa29.5■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Ccne1Q61457 408 aa29.48■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Arhgap33Q80YF9 1305 aa29.47■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Cc2d1aQ8K1A6 943 aa29.47■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Pank3Q8R2W9 370 aa29.47■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Gm10471E9Q1C7 252 aa29.45■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Bsdc1Q80Y55 427 aa29.45■■■□□ 2.31
Pcf11-204ENSMUST00000208058 Parp14Q2EMV9 1817 aa29.45■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Dcaf11Q91VU6 549 aa29.43■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Inpp5dQ9ES52 1191 aa29.42■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Simc1E9Q6E9 1354 aa29.41■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Afg3l2Q8JZQ2 802 aaKnown RBP29.41■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Abca3Q8R420 1704 aa29.41■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Elp1Q7TT37 1333 aaKnown RBP29.41■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Kdm6aO70546 1401 aa29.39■■■□□ 2.3
Pcf11-204ENSMUST00000208058 Gprasp1Q5U4C1 1347 aa29.38■■■□□ 2.29
Pcf11-204ENSMUST00000208058 Pim2Q62070 370 aa29.37■■■□□ 2.29
Pcf11-204ENSMUST00000208058 Fam50bQ9WTJ8 334 aa29.36■■■□□ 2.29
Pcf11-204ENSMUST00000208058 Sos2Q02384 1333 aa29.32■■■□□ 2.28
Pcf11-204ENSMUST00000208058 ClspnQ80YR7 1315 aa29.31■■■□□ 2.28
Pcf11-204ENSMUST00000208058 Gm21680A0A0G2JGR8 267 aa29.31■■■□□ 2.28
Pcf11-204ENSMUST00000208058 Shank3Q4ACU6 1730 aa29.31■■■□□ 2.28
Pcf11-204ENSMUST00000208058 Zscan10Q3URR7 782 aa29.3■■■□□ 2.28
Pcf11-204ENSMUST00000208058 Ppp1r37Q8BKR5 712 aa29.3■■■□□ 2.28
Pcf11-204ENSMUST00000208058 PappaQ8R4K8 1624 aa29.29■■■□□ 2.28
Pcf11-204ENSMUST00000208058 PsdQ5DTT2 1024 aa29.28■■■□□ 2.28
Pcf11-204ENSMUST00000208058 Speer4bQ9D9F7 267 aa29.27■■■□□ 2.28
Pcf11-204ENSMUST00000208058 Aplp2Q06335 707 aa29.25■■■□□ 2.27
Pcf11-204ENSMUST00000208058 4930572O03RikQ8C5Y0 211 aa29.25■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Eif4a2P10630 407 aa29.24■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Eya1P97767 591 aa29.24■■■□□ 2.27
Pcf11-204ENSMUST00000208058 ThemisQ8BGW0 636 aa29.24■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Gpr150Q8BL07 427 aa29.24■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Ccdc85cE9Q6B2 420 aa29.23■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Plekhg5Q66T02 1073 aa29.23■■■□□ 2.27
Pcf11-204ENSMUST00000208058 En2P09066 324 aa29.21■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Q8BT18 775 aa29.21■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Ciz1Q8VEH2 845 aa29.21■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Rps6ka4Q9Z2B9 773 aa29.21■■■□□ 2.27
Pcf11-204ENSMUST00000208058 Trim28Q62318 834 aa29.2■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Ankrd13dQ6PD24 605 aa29.19■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Magea1O89006 320 aa29.17■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Magea5O89009 320 aa29.17■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Akt1s1Q9D1F4 257 aa29.17■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Magea2Q9R2A2 320 aa29.17■■■□□ 2.26
Pcf11-204ENSMUST00000208058 PnisrA2AJT4 805 aaKnown RBP29.16■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Kif23E9Q5G3 953 aa29.16■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Larp1Q6ZQ58 1072 aaKnown RBP29.16■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Tns2Q8CGB6 1400 aa29.16■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Kiaa0319lQ8K135 1048 aa29.15■■■□□ 2.26
Pcf11-204ENSMUST00000208058 Cald1E9QA15 768 aaKnown RBP29.13■■■□□ 2.25
Pcf11-204ENSMUST00000208058 Ppp1r15aP17564 657 aa29.13■■■□□ 2.25
Pcf11-204ENSMUST00000208058 Rsph6aQ8CDR2 708 aa29.13■■■□□ 2.25
Pcf11-204ENSMUST00000208058 AtrnQ9WU60 1428 aa29.11■■■□□ 2.25
Pcf11-204ENSMUST00000208058 Fam198bQ3UPI1 517 aa29.11■■■□□ 2.25
Pcf11-204ENSMUST00000208058 Hmgb2P30681 210 aaKnown RBP29.1■■■□□ 2.25
Pcf11-204ENSMUST00000208058 ApobrQ8VBT6 942 aa29.1■■■□□ 2.25
Pcf11-204ENSMUST00000208058 Klc3Q91W40 508 aa29.08■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms