RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Rnf17Q99MV7 1640 aa7.98□□□□□ -1.13
Csde1-206ENSMUST00000197488 Robo2Q7TPD3 1470 aa7.98□□□□□ -1.13
Csde1-206ENSMUST00000197488 Prkar2bP31324 416 aa7.98□□□□□ -1.13
Csde1-206ENSMUST00000197488 Cgnl1Q6AW69 1298 aa7.98□□□□□ -1.13
Csde1-206ENSMUST00000197488 Tmx3Q8BXZ1 456 aa7.98□□□□□ -1.13
Csde1-206ENSMUST00000197488 Slc52a2Q9D8F3 450 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Cyp46a1Q9WVK8 500 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Itsn2Q9Z0R6 1659 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Abcc3B2RX12 1523 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Dhx16G3X8X0 1044 aaKnown RBP7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Pdia3P27773 505 aaKnown RBP7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 LifrP42703 1092 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Ciz1Q8VEH2 845 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Iqsec2Q5DU25 1478 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Zfp777B9EKF4 885 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Q3TQI7 289 aaKnown RBP7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Gpatch11Q3UFS4 262 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Wwc1Q5SXA9 1104 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Fam13aQ8BGI4 693 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Ush1cQ9ES64 910 aa7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Ythdc2B2RR83 1445 aaKnown RBP7.97□□□□□ -1.13
Csde1-206ENSMUST00000197488 Ptch1Q61115 1434 aa7.96□□□□□ -1.13
Csde1-206ENSMUST00000197488 Txndc2Q6P902 515 aa7.96□□□□□ -1.14
Csde1-206ENSMUST00000197488 Prune1Q8BIW1 454 aa7.96□□□□□ -1.14
Csde1-206ENSMUST00000197488 Snap23O09044 210 aa7.96□□□□□ -1.14
Csde1-206ENSMUST00000197488 Casc1Q6TDU8 730 aa7.96□□□□□ -1.14
Csde1-206ENSMUST00000197488 Afap1Q80YS6 731 aa7.96□□□□□ -1.14
Csde1-206ENSMUST00000197488 Rab11fip3Q8CHD8 1047 aa7.96□□□□□ -1.14
Csde1-206ENSMUST00000197488 Abca6Q8K441 1624 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Rtf1A2AQ19 715 aaKnown RBP7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 MyclP10166 368 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Psme1P97371 249 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 4931400O07RikQ9D4M5 137 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Uggt2E9Q4X2 1504 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Becn1O88597 448 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Fchsd2Q3USJ8 740 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Ppp6r3Q922D4 844 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Stk3Q9JI10 497 aa7.95□□□□□ -1.14
Csde1-206ENSMUST00000197488 Larp1bA0A0A6YXJ7 370 aaKnown RBP7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Prim1P20664 417 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Filip1lQ6P6L0 1131 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Jakmip1Q8BVL9 626 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Gripap1Q8VD04 806 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Talpid3E9PV87 1520 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Cep152A2AUM9 1736 aaKnown RBP7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Nucb1Q02819 459 aaKnown RBP7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Erc2Q6PH08 957 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Rims1Q99NE5 1463 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Igf1rQ60751 1373 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Samd1D3YXK1 519 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 NexnQ7TPW1 607 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Srgap3Q812A2 1099 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Sv2bQ8BG39 683 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Gcc1Q9D4H2 778 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Skint5A7XUY5 1461 aa7.94□□□□□ -1.14
Csde1-206ENSMUST00000197488 Efcab6Q6P1E8 1516 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Gm9992B2RWK3 458 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Slc4a10Q5DTL9 1118 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Unc93aQ710D3 458 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 CenppQ9CZ92 286 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Erbb4Q61527 1308 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Pik3r4Q8VD65 1358 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 MccE9PWI3 1003 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Ubap1lG3UW59 384 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Isy1Q69ZQ2 285 aaKnown RBP7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Olfml1Q8BSH2 233 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Ppp1r15aP17564 657 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Kif4P33174 1231 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Fam83gQ5SWY7 812 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Kdm4cQ8VCD7 1054 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Cyp27a1Q9DBG1 533 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Znf518aB2RRF6 1478 aaKnown RBP7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 OvosQ3UU35 1456 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 PaskQ8CEE6 1383 aa7.93□□□□□ -1.14
Csde1-206ENSMUST00000197488 Cwc27Q3TKY6 469 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Rcan3Q9JKK0 239 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Nos1Q9Z0J4 1429 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Brpf1B2RRD7 1212 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Tpm2P58774 284 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 CgnP59242 1191 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Polr3gQ6NXY9 223 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Rsph6aQ8CDR2 708 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Naa30Q8CES0 364 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Zbtb22Q9Z0G7 638 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Atg4a-psA0A0G2JFS9 396 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Zkscan16A2ALW2 728 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Irf5P56477 497 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Bach1P97302 739 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 TmpoQ61033 693 aaKnown RBP7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Atg4aQ8C9S8 396 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Cabp4Q8VHC5 271 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Chd1lQ9CXF7 900 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Uhrf1bp1lA2RSJ4 1457 aa7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Prrc2bQ7TPM1 1486 aaKnown RBP7.92□□□□□ -1.14
Csde1-206ENSMUST00000197488 Myom1Q62234 1667 aaKnown RBP7.91□□□□□ -1.14
Csde1-206ENSMUST00000197488 F2rP30558 430 aa7.91□□□□□ -1.14
Csde1-206ENSMUST00000197488 EvcP57680 1005 aa7.91□□□□□ -1.14
Csde1-206ENSMUST00000197488 EappQ5BU09 281 aa7.91□□□□□ -1.14
Csde1-206ENSMUST00000197488 Ptpdc1Q6NZK8 747 aa7.91□□□□□ -1.14
Csde1-206ENSMUST00000197488 St18Q80TY4 1045 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms