RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Rad23bP54728 416 aa25.44■■□□□ 1.66
Sqstm1-205ENSMUST00000143379 Fam184bQ0KK56 942 aa25.43■■□□□ 1.66
Sqstm1-205ENSMUST00000143379 Ptpn23Q6PB44 1692 aa25.42■■□□□ 1.66
Sqstm1-205ENSMUST00000143379 Mier1Q5UAK0 511 aa25.41■■□□□ 1.66
Sqstm1-205ENSMUST00000143379 FancaQ9JL70 1439 aa25.4■■□□□ 1.66
Sqstm1-205ENSMUST00000143379 Trpc5Q9QX29 975 aa25.4■■□□□ 1.66
Sqstm1-205ENSMUST00000143379 Pak3Q61036 559 aa25.38■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Hirip3Q8BLH7 601 aa25.38■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Nlgn1Q99K10 843 aa25.38■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Sik1Q60670 779 aa25.37■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Mst1rQ62190 1378 aa25.36■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Hspa5P20029 655 aaKnown RBP25.36■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Akt1s1Q9D1F4 257 aa25.36■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Rnf180Q3U827 592 aa25.35■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Dennd6aQ8BH65 605 aa25.35■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Sgip1Q8VD37 806 aa25.35■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Emilin1Q99K41 1017 aa25.35■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Znf335A2A5K6 1337 aa25.35■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Kif16bB1AVY7 1312 aa25.35■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Q8BT18 775 aa25.34■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Ginm1Q91WR6 327 aa25.34■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Kcnh5Q920E3 988 aa25.34■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 FanciQ8K368 1330 aa25.34■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Exosc9Q9JHI7 438 aaKnown RBP25.33■■□□□ 1.65
Sqstm1-205ENSMUST00000143379 Exoc5Q3TPX4 708 aa25.32■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Afg3l2Q8JZQ2 802 aaKnown RBP25.32■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Arfgef2A2A5R2 1792 aa25.31■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Nsd3Q6P2L6 1439 aa25.31■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Fam198bQ3UPI1 517 aa25.31■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Ciz1Q8VEH2 845 aa25.31■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Neurod1Q60867 357 aa25.3■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Fmnl2A2APV2 1086 aa25.29■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Fchsd2Q3USJ8 740 aa25.29■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 TatQ8QZR1 454 aa25.29■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 CrklP47941 303 aa25.28■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Nol11Q8BJW5 723 aaKnown RBP25.28■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 Slit1Q80TR4 1531 aa25.27■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 FocadA2AKG8 1798 aa25.27■■□□□ 1.64
Sqstm1-205ENSMUST00000143379 OptnQ8K3K8 584 aa25.26■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Srcin1Q9QWI6 1250 aa25.26■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Cabp4Q8VHC5 271 aa25.25■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Ankrd13dQ6PD24 605 aa25.24■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Tmem132eQ6IEE6 982 aa25.23■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 IncenpQ9WU62 880 aa25.23■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Zswim8Q3UHH1 1832 aaKnown RBP25.23■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Cnga1P29974 684 aa25.22■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Zpr1Q62384 459 aa25.21■■□□□ 1.63
Sqstm1-205ENSMUST00000143379 Ubr1O70481 1757 aa25.19■■□□□ 1.62
Sqstm1-205ENSMUST00000143379 Kcnh4A2A5F7 1018 aa25.19■■□□□ 1.62
Sqstm1-205ENSMUST00000143379 Egfem1Q8C088 590 aa25.19■■□□□ 1.62
Sqstm1-205ENSMUST00000143379 Stard8Q8K031 1019 aa25.19■■□□□ 1.62
Sqstm1-205ENSMUST00000143379 Sos2Q02384 1333 aa25.18■■□□□ 1.62
Sqstm1-205ENSMUST00000143379 Chd4Q6PDQ2 1915 aaKnown RBP25.16■■□□□ 1.62
Sqstm1-205ENSMUST00000143379 Abca3Q8R420 1704 aa25.16■■□□□ 1.62
Sqstm1-205ENSMUST00000143379 Usp21Q9QZL6 566 aa25.13■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 InsrP15208 1372 aa25.13■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Cdk12Q14AX6 1484 aaKnown RBP25.13■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 UtrnE9Q6R7 3430 aa25.13■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Zranb3Q6NZP1 1069 aa25.12■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 ErfeQ6PGN1 340 aa25.12■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Ppm1fQ8CGA0 452 aa25.12■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Mtfr1lQ9CWE0 289 aa25.12■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Plekhd1B2RPU2 505 aa25.11■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Socs7Q8VHQ2 579 aa25.11■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Smg6P61406 1418 aaKnown RBP25.11■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Scn7aB1AYL1 1681 aa25.1■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Ahnak2E9PYB0 1738 aaKnown RBP25.1■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Magea6O89010 325 aa25.1■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Ano8Q6PB70 1060 aa25.1■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Magea3Q6T340 320 aa25.1■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Hoxd11P23813 323 aa25.09■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Map2P20357 1828 aa25.09■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Shank3Q4ACU6 1730 aa25.08■■□□□ 1.61
Sqstm1-205ENSMUST00000143379 Col15a1O35206 1367 aa25.06■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Gpr162Q3UN16 588 aa25.06■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Kiaa0319lQ8K135 1048 aa25.04■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Chrna2Q91X60 512 aa25.04■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Adgrb1Q3UHD1 1582 aa25.03■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Fam122aQ9DB52 284 aa25.03■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Cc2d1aQ8K1A6 943 aa25.02■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Elp1Q7TT37 1333 aaKnown RBP25.02■■□□□ 1.6
Sqstm1-205ENSMUST00000143379 Mrps5Q99N87 432 aaKnown RBP25.01■■□□□ 1.59
Sqstm1-205ENSMUST00000143379 Msl1Q6PDM1 616 aa25■■□□□ 1.59
Sqstm1-205ENSMUST00000143379 Prom2Q3UUY6 835 aa24.99■■□□□ 1.59
Sqstm1-205ENSMUST00000143379 CemipQ8BI06 1361 aa24.99■■□□□ 1.59
Sqstm1-205ENSMUST00000143379 Fam50bQ9WTJ8 334 aa24.99■■□□□ 1.59
Sqstm1-205ENSMUST00000143379 Rps6ka4Q9Z2B9 773 aa24.98■■□□□ 1.59
Sqstm1-205ENSMUST00000143379 Col23a1Q8K4G2 532 aa24.97■■□□□ 1.59
Sqstm1-205ENSMUST00000143379 Igsf1Q7TQA1 1317 aa24.95■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Hoxc9P09633 260 aa24.94■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Adgre1Q61549 931 aa24.94■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Rock2P70336 1388 aa24.93■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Gm21680A0A0G2JGR8 267 aa24.93■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 MeiocA2AG06 965 aa24.93■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Gm10471E9Q1C7 252 aa24.93■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Znrd1-asQ8R0E5 213 aa24.92■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Kcnn1Q9EQR3 537 aa24.92■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Jdp2P97875 163 aa24.91■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 TkfcQ8VC30 578 aa24.91■■□□□ 1.58
Sqstm1-205ENSMUST00000143379 Rundc1Q0VDN7 615 aa24.89■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms