RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Zpr1Q62384 459 aa21.23■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 OptnQ8K3K8 584 aa21.23■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Nwd2Q6P5U7 1742 aa21.22■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 CrklP47941 303 aa21.22■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Sin3aQ60520 1274 aaKnown RBP21.21■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Tmem132eQ6IEE6 982 aa21.21■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Ankrd23Q812A3 306 aa21.21■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Ginm1Q91WR6 327 aa21.21■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 4930523C07RikE9Q2T4 99 aa21.2■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Ddb1Q3U1J4 1140 aaKnown RBP21.19■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 IbtkQ6ZPR6 1352 aaKnown RBP21.19■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Slit1Q80TR4 1531 aa21.18■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Hoxb7P09024 217 aa21.17■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 TkfcQ8VC30 578 aa21.17■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Mst1rQ62190 1378 aa21.17■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 PrxO55103 1391 aa21.16■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Las1lA2BE28 776 aaKnown RBP21.16■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Hoxc9P09633 260 aa21.16■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Pank3Q8R2W9 370 aa21.16■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Zcrb1Q9CZ96 217 aaKnown RBP21.16■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 Zranb3Q6NZP1 1069 aa21.15■□□□□ 0.98
Hmgb1-208ENSMUST00000139443 FocadA2AKG8 1798 aa21.13■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 ClspnQ80YR7 1315 aa21.13■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Dcaf11Q91VU6 549 aa21.13■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Apba2P98084 750 aa21.12■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Exoc5Q3TPX4 708 aa21.12■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Sik1Q60670 779 aa21.11■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Rad17Q6NXW6 688 aa21.11■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Cc2d1aQ8K1A6 943 aa21.11■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Inpp5dQ9ES52 1191 aa21.11■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Smg6P61406 1418 aaKnown RBP21.1■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 GakQ99KY4 1305 aa21.09■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 GalcP54818 684 aa21.09■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Gm10471E9Q1C7 252 aa21.08■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Ppfibp2O35711 882 aa21.08■□□□□ 0.97
Hmgb1-208ENSMUST00000139443 Ccne1Q61457 408 aa21.07■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 VirmaA2AIV2 1811 aaKnown RBP21.06■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Nsd3Q6P2L6 1439 aa21.06■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Lrit1Q8K099 624 aa21.06■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Kcnh4A2A5F7 1018 aa21.05■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Elp1Q7TT37 1333 aaKnown RBP21.04■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Vars2Q3U2A8 1060 aa21.04■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Col15a1O35206 1367 aa21.04■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Ptpn23Q6PB44 1692 aa21.03■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Zscan10Q3URR7 782 aa21.03■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Aplp2Q06335 707 aa21.02■□□□□ 0.96
Hmgb1-208ENSMUST00000139443 Rab3gap2Q8BMG7 1366 aa21■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Kdm6aO70546 1401 aa21■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Fam50bQ9WTJ8 334 aa20.99■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Parp14Q2EMV9 1817 aa20.99■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Plekhg5Q66T02 1073 aa20.98■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Gprasp1Q5U4C1 1347 aa20.98■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Arhgap33Q80YF9 1305 aa20.98■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Gm21680A0A0G2JGR8 267 aa20.97■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Bsdc1Q80Y55 427 aa20.97■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Ahnak2E9PYB0 1738 aaKnown RBP20.97■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Snapc4Q8BP86 1333 aa20.97■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Adgrb1Q3UHD1 1582 aa20.97■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Simc1E9Q6E9 1354 aa20.97■□□□□ 0.95
Hmgb1-208ENSMUST00000139443 Ezh2Q61188 746 aaKnown RBP20.95■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 4930572O03RikQ8C5Y0 211 aa20.95■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Afg3l2Q8JZQ2 802 aaKnown RBP20.95■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Speer4bQ9D9F7 267 aa20.95■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 PnisrA2AJT4 805 aaKnown RBP20.94■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Q8BT18 775 aa20.94■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Pim2Q62070 370 aa20.93■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Ciz1Q8VEH2 845 aa20.93■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Pnpla7A2AJ88 1352 aa20.92■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Arfgef2A2A5R2 1792 aa20.92■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Erbb3Q61526 1339 aa20.9■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Hmgb2P30681 210 aaKnown RBP20.9■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 ThemisQ8BGW0 636 aa20.9■□□□□ 0.94
Hmgb1-208ENSMUST00000139443 Zfp777B9EKF4 885 aa20.89■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Eif4a2P10630 407 aa20.89■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Eya1P97767 591 aa20.88■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Cald1E9QA15 768 aaKnown RBP20.87■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Ppp1r15aP17564 657 aa20.87■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Ankrd13dQ6PD24 605 aa20.87■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Ppp1r37Q8BKR5 712 aa20.87■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Trim28Q62318 834 aa20.85■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Sos2Q02384 1333 aa20.83■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Ccdc85cE9Q6B2 420 aa20.83■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Rsph6aQ8CDR2 708 aa20.83■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 ApobrQ8VBT6 942 aa20.83■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 Rps6ka4Q9Z2B9 773 aa20.83■□□□□ 0.93
Hmgb1-208ENSMUST00000139443 MpripP97434 1024 aa20.82■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Eif3bQ8JZQ9 803 aaKnown RBP20.81■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Klc3Q91W40 508 aa20.81■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Gsdma3Q5Y4Y6 464 aa20.8■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Abca3Q8R420 1704 aa20.78■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Gpr150Q8BL07 427 aa20.78■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Gm21663A0A0G2JE01 267 aa20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Gm7361D3Z6R1 267 aa20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 5031410I06RikE9Q4E0 267 aa20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Gm1979E9QAN3 267 aa20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Gm5862K7N5V5 267 aa20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Gm10220K7N660 267 aa20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 PsdQ5DTT2 1024 aa20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Larp1Q6ZQ58 1072 aaKnown RBP20.77■□□□□ 0.92
Hmgb1-208ENSMUST00000139443 Kiaa0319lQ8K135 1048 aa20.77■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms