RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Bbof1Q3V079 533 aa19.41■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Cfap45Q9D9U9 551 aa19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Acbd3Q8BMP6 525 aa19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Nfxl1E9Q8I7 918 aaKnown RBP19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Matr3Q8K310 846 aaKnown RBP19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Soga3Q6NZL0 945 aa19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Gnl3lQ6PGG6 577 aaKnown RBP19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Cfap53Q9D439 514 aa19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Fyco1Q8VDC1 1437 aa19.4■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Smarcad1Q04692 1021 aa19.39■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Igf2bp2Q5SF07 592 aaKnown RBP19.39■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Hsf2bpQ9D4G2 338 aa19.39■□□□□ 0.7
Ubr3-202ENSMUST00000112251 Psmc4P54775 418 aa19.39■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Luzp1Q8R4U7 1068 aaKnown RBP19.39■□□□□ 0.69
Ubr3-202ENSMUST00000112251 PdiltQ9DAN1 588 aa19.39■□□□□ 0.69
Ubr3-202ENSMUST00000112251 DesP31001 469 aaKnown RBP19.39■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Nol8Q3UHX0 1147 aaKnown RBP19.39■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Nop53Q8BK35 484 aaKnown RBP19.39■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Plekhd1B2RPU2 505 aa19.39■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Iffo1Q8BXL9 562 aa19.38■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Cacna2d4Q5RJF7 1116 aa19.38■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Dnajc2P54103 621 aaKnown RBP19.38■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Nup88Q8CEC0 753 aaKnown RBP19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Ncbp1Q3UYV9 790 aaKnown RBP19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Dusp27Q148W8 1138 aa19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Trim58Q5NCC9 485 aa19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Lrrfip1Q3UZ39 729 aaKnown RBP19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Sirt1Q923E4 737 aa19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Nup155Q99P88 1391 aaKnown RBP19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Mink1Q9JM52 1308 aa19.37■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Ttll5Q8CHB8 1328 aa19.36■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Camk4P08414 469 aa19.36■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Gse1Q3U3C9 1213 aa19.36■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Tmco5aQ9D9D5 303 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Rock1P70335 1354 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Gm1979E9QAN3 267 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Nbr1P97432 988 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Ctr9Q62018 1173 aaKnown RBP19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Shtn1Q8K2Q9 631 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Q9D9S1 216 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Lmbr1Q9JIT0 490 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Krt85Q9Z2T6 507 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Neurog2P70447 263 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Uri1Q3TLD5 531 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Gm44503E9PYU5 387 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Dnaaf4Q8R368 420 aa19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Tpd52l2Q9CYZ2 220 aaKnown RBP19.35■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Atp2b1G5E829 1220 aa19.34■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Zeb2Q9R0G7 1215 aa19.34■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Mnat1P51949 309 aa19.34■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Fam177a1Q8BR63 207 aa19.34■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Rpap1Q80TE0 1409 aa19.34■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Arid3aQ62431 601 aa19.34■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Pank1Q8K4K6 548 aa19.34■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Smc1bQ920F6 1248 aa19.33■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Syap1Q9D5V6 365 aa19.33■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Olr1Q9EQ09 363 aa19.33■□□□□ 0.69
Ubr3-202ENSMUST00000112251 Jakmip3Q5DTN8 844 aa19.33■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Fsd1Q7TPM6 496 aa19.33■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Samm50Q8BGH2 469 aa19.33■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Tsg101Q61187 391 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Apol7cQ8C6E1 369 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Gbp2Q9Z0E6 589 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Znf394Q9Z1D9 521 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Cetn1P41209 172 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Spty2d1Q68FG3 682 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Mxra7Q9CZH7 178 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Inpp5dQ9ES52 1191 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Paxip1Q6NZQ4 1056 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Pip4k2bQ80XI4 416 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Gle1Q8R322 699 aa19.32■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Tacc3Q9JJ11 631 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Mapk8ip1Q9WVI9 707 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Fam107bQ3TGF2 131 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Nek5Q7TSC3 627 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Mroh7A2AVR2 1279 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Ccdc6D3YZP9 469 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Nap1l5Q9JJF0 156 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 TefQ9JLC6 301 aa19.31■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Ankrd49Q8VE42 238 aa19.3■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Arhgap35Q91YM2 1499 aa19.3■□□□□ 0.68
Ubr3-202ENSMUST00000112251 ZfxP17012 799 aa19.3■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Fam184aE9PW83 1143 aa19.3■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Tex13c2A0A0G2JGA3 530 aa19.3■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Maats1Q8BRC6 783 aa19.3■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Cnnm1Q0GA42 951 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Tnpo1Q8BFY9 898 aaKnown RBP19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Gtf2a1Q99PM3 378 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Med4Q9CQA5 270 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Zkscan2G3X952 960 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Gjc1P28229 396 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Shq1Q7TMX5 569 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Ccdc172Q810N9 267 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Hook3Q8BUK6 718 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Cdkl5Q3UTQ8 938 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Gm21671G3UY31 267 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Ccdc183A2AJB1 534 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Cdr1E9Q0B4 517 aa19.29■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Pdcl2Q78Y63 240 aa19.28■□□□□ 0.68
Ubr3-202ENSMUST00000112251 Ssx2ipQ8VC66 615 aa19.28■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms