RNA–Protein interactions for RNA: ENSMUST00000108662.1

Trappc1-204, Transcript of Trafficking protein particle complex subunit 1, mousemouse

TSL 2 BASIC

Gene Trappc1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc1-204ENSMUST00000108662 Upf2A2AT37 1269 aaKnown RBP9.62□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Map4k4P97820 1233 aaKnown RBP9.62□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Rad21Q61550 635 aaKnown RBP9.62□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Pard3Q99NH2 1333 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Fmnl2A2APV2 1086 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Card10P58660 1021 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Tsen2Q6P7W5 460 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Pm20d1Q8C165 503 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Cabp4Q8VHC5 271 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 P2rx7Q9Z1M0 595 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Mdc1Q5PSV9 1707 aa9.61□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Birc3O08863 600 aa9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Ccdc129Q14B48 1034 aa9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Slx1bQ8BX32 270 aa9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 CrbnQ8C7D2 445 aa9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 TatQ8QZR1 454 aa9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Nlgn1Q99K10 843 aa9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 U2af1Q9D883 239 aaKnown RBP9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Col22a1E9Q7P1 1613 aa9.6□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Trap1aP19473 224 aa9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Scaf1Q5U4C3 1256 aaKnown RBP9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Trim28Q62318 834 aa9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Sugp2Q8CH09 1067 aa9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Amotl2Q8K371 772 aa9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Kank1E9Q238 1360 aa9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 CemipQ8BI06 1361 aa9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 TnrQ8BYI9 1358 aa9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Cdk12Q14AX6 1484 aaKnown RBP9.59□□□□□ -0.87
Trappc1-204ENSMUST00000108662 Scn7aB1AYL1 1681 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ppp1r15aP17564 657 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Uspl1Q3ULM6 1089 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ralbp1Q62172 648 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Speer4f1Q9D5Q6 258 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Dnajc10Q9DC23 793 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Rgs17Q9QZB0 210 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ltbp1Q8CG19 1712 aa9.58□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Mapk8ip3Q9ESN9 1337 aa9.57□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Cacna1sQ02789 1880 aa9.57□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Calr4Q3TQS0 420 aa9.57□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Znf541Q0GGX2 1363 aa9.57□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ubr1O70481 1757 aa9.57□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Nckap5lQ6GQX2 1323 aa9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Tnks1bp1P58871 1720 aa9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Plekhh1Q80TI1 1356 aa9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Csrnp3P59055 597 aa9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Nol11Q8BJW5 723 aaKnown RBP9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ncbp3Q8BZR9 615 aaKnown RBP9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ciz1Q8VEH2 845 aa9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ttc41Q692V3 1318 aa9.56□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Uhrf1bp1lA2RSJ4 1457 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Map2P20357 1828 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 L3mbtl2P59178 703 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Fchsd2Q3USJ8 740 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Kiaa0319Q5SZV5 1081 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ano8Q6PB70 1060 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ccdc30Q8BVF4 654 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Taok3Q8BYC6 898 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Slc12a5Q91V14 1138 aa9.55□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Nup153E9Q3G8 1462 aaKnown RBP9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Spef2Q8C9J3 1734 aa9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Plekhd1B2RPU2 505 aa9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Zfp777B9EKF4 885 aa9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ccdc6D3YZP9 469 aa9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Pak3Q61036 559 aa9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 FancaQ9JL70 1439 aa9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Kdm2bQ6P1G2 1309 aa9.54□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ubap1lG3UW59 384 aa9.53□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Neurod2Q62414 383 aa9.53□□□□□ -0.88
Trappc1-204ENSMUST00000108662 RgmbQ7TQ33 436 aa9.53□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Ppp6r1Q7TSI3 856 aa9.53□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Rsph6aQ8CDR2 708 aa9.53□□□□□ -0.88
Trappc1-204ENSMUST00000108662 PalmQ9Z0P4 383 aa9.53□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Fer1l6E0CZ42 1862 aa9.53□□□□□ -0.88
Trappc1-204ENSMUST00000108662 Cavin4A2AMM0 362 aa9.52□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Uhrf1bp1B2KF50 1429 aa9.52□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Rad17Q6NXW6 688 aa9.52□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Tcerg1Q8CGF7 1100 aaKnown RBP9.52□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Apaf1O88879 1249 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 CrklP47941 303 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Vps33bP59016 617 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Zpr1Q62384 459 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 OptnQ8K3K8 584 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Ginm1Q91WR6 327 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Erbb3Q61526 1339 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Kat6bQ8BRB7 1872 aa9.51□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Robo1O89026 1612 aa9.5□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Tmem132eQ6IEE6 982 aa9.5□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Ankrd23Q812A3 306 aa9.5□□□□□ -0.89
Trappc1-204ENSMUST00000108662 TkfcQ8VC30 578 aa9.5□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Ly75Q60767 1723 aa9.5□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Ptpn23Q6PB44 1692 aa9.49□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Mast2Q60592 1734 aa9.49□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Adamtsl1Q8BLI0 1745 aa9.49□□□□□ -0.89
Trappc1-204ENSMUST00000108662 OscarQ8VBT3 265 aa9.49□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Iqcf3Q9D498 203 aa9.49□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Slit1Q80TR4 1531 aa9.49□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Mst1rQ62190 1378 aa9.49□□□□□ -0.89
Trappc1-204ENSMUST00000108662 Parp14Q2EMV9 1817 aa9.48□□□□□ -0.89
Trappc1-204ENSMUST00000108662 4930523C07RikE9Q2T4 99 aa9.48□□□□□ -0.89
Trappc1-204ENSMUST00000108662 NeflP08551 543 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms