RNA–Protein interactions for RNA: ENSMUST00000108662.1

Trappc1-204, Transcript of Trafficking protein particle complex subunit 1, mousemouse

TSL 2 BASIC

Gene Trappc1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc1-204ENSMUST00000108662 Gm35339A0A140LHH9 1649 aa15.77■□□□□ 0.12
Trappc1-204ENSMUST00000108662 NischQ80TM9 1593 aa15.58■□□□□ 0.09
Trappc1-204ENSMUST00000108662 Abcc9P70170 1546 aa15.07■□□□□ 0
Trappc1-204ENSMUST00000108662 Abcc8B2RUS7 1588 aa15.06■□□□□ 0
Trappc1-204ENSMUST00000108662 ScribQ80U72 1612 aa14.52□□□□□ -0.09
Trappc1-204ENSMUST00000108662 NacadQ5SWP3 1504 aa14.1□□□□□ -0.15
Trappc1-204ENSMUST00000108662 Kdm5dQ62240 1548 aa14.05□□□□□ -0.16
Trappc1-204ENSMUST00000108662 Dcaf1Q80TR8 1506 aa13.86□□□□□ -0.19
Trappc1-204ENSMUST00000108662 Sycp2Q9CUU3 1500 aa13.82□□□□□ -0.2
Trappc1-204ENSMUST00000108662 BicraF8VPZ9 1578 aa13.6□□□□□ -0.23
Trappc1-204ENSMUST00000108662 Rb1cc1Q9ESK9 1588 aa13.58□□□□□ -0.23
Trappc1-204ENSMUST00000108662 Rhox8Q6VSS7 320 aa13.58□□□□□ -0.24
Trappc1-204ENSMUST00000108662 Baz1aO88379 1555 aa13.39□□□□□ -0.27
Trappc1-204ENSMUST00000108662 Ccdc180J3QNE4 1664 aa13.37□□□□□ -0.27
Trappc1-204ENSMUST00000108662 Crybg2B7ZCC2 1516 aa13.34□□□□□ -0.27
Trappc1-204ENSMUST00000108662 Pds5bQ4VA53 1446 aaKnown RBP13.3□□□□□ -0.28
Trappc1-204ENSMUST00000108662 Rtl1Q7M732 1744 aa13.27□□□□□ -0.29
Trappc1-204ENSMUST00000108662 Dnajc5bQ9CQ94 199 aa13.26□□□□□ -0.29
Trappc1-204ENSMUST00000108662 Zcchc6Q5BLK4 1491 aaKnown RBP13.23□□□□□ -0.29
Trappc1-204ENSMUST00000108662 Thoc2B1AZI6 1594 aaKnown RBP13.15□□□□□ -0.3
Trappc1-204ENSMUST00000108662 Atad2bE9Q166 1460 aaKnown RBP13.15□□□□□ -0.3
Trappc1-204ENSMUST00000108662 Chic1Q8CBW7 227 aa13.07□□□□□ -0.32
Trappc1-204ENSMUST00000108662 Ercc6F8VPZ5 1481 aa13.04□□□□□ -0.32
Trappc1-204ENSMUST00000108662 Smarca4Q3TKT4 1613 aaKnown RBP13.02□□□□□ -0.32
Trappc1-204ENSMUST00000108662 Smarca2Q6DIC0 1577 aa12.98□□□□□ -0.33
Trappc1-204ENSMUST00000108662 Iqgap2Q3UQ44 1575 aa12.96□□□□□ -0.33
Trappc1-204ENSMUST00000108662 Cc2d2aQ8CFW7 1633 aa12.95□□□□□ -0.34
Trappc1-204ENSMUST00000108662 Cecr2E9Q2Z1 1453 aa12.92□□□□□ -0.34
Trappc1-204ENSMUST00000108662 Fam135aQ6NS59 1506 aa12.87□□□□□ -0.35
Trappc1-204ENSMUST00000108662 Wdr62Q3U3T8 1523 aa12.84□□□□□ -0.35
Trappc1-204ENSMUST00000108662 Frmpd1A2AKB4 1549 aa12.82□□□□□ -0.36
Trappc1-204ENSMUST00000108662 Phldb1Q6PDH0 1371 aaKnown RBP12.79□□□□□ -0.36
Trappc1-204ENSMUST00000108662 Baz1bQ9Z277 1479 aa12.78□□□□□ -0.36
Trappc1-204ENSMUST00000108662 Ubl4bQ9CQ84 188 aa12.67□□□□□ -0.38
Trappc1-204ENSMUST00000108662 Cttnbp2B9EJA2 1648 aa12.66□□□□□ -0.38
Trappc1-204ENSMUST00000108662 Brd4Q9ESU6 1400 aaKnown RBP12.66□□□□□ -0.38
Trappc1-204ENSMUST00000108662 CftrP26361 1476 aa12.65□□□□□ -0.38
Trappc1-204ENSMUST00000108662 Synj1Q8CHC4 1574 aa12.62□□□□□ -0.39
Trappc1-204ENSMUST00000108662 Unc13aQ4KUS2 1712 aa12.6□□□□□ -0.39
Trappc1-204ENSMUST00000108662 Ccdc136Q3TVA9 1136 aa12.59□□□□□ -0.39
Trappc1-204ENSMUST00000108662 Mrc2Q64449 1479 aa12.59□□□□□ -0.39
Trappc1-204ENSMUST00000108662 Mapk8ip2Q9ERE9 830 aa12.51□□□□□ -0.41
Trappc1-204ENSMUST00000108662 Esf1Q3V1V3 845 aaKnown RBP12.5□□□□□ -0.41
Trappc1-204ENSMUST00000108662 Trim41Q5NCC3 630 aa12.46□□□□□ -0.41
Trappc1-204ENSMUST00000108662 Rsf1E9PWW9 1441 aaKnown RBP12.41□□□□□ -0.42
Trappc1-204ENSMUST00000108662 Kif15Q6P9L6 1387 aa12.39□□□□□ -0.43
Trappc1-204ENSMUST00000108662 Cux2P70298 1426 aa12.38□□□□□ -0.43
Trappc1-204ENSMUST00000108662 Lamc3Q9R0B6 1581 aa12.3□□□□□ -0.44
Trappc1-204ENSMUST00000108662 Lrriq1Q0P5X1 1673 aa12.29□□□□□ -0.44
Trappc1-204ENSMUST00000108662 Npm1Q61937 292 aaKnown RBP12.28□□□□□ -0.44
Trappc1-204ENSMUST00000108662 Kif21aQ9QXL2 1672 aa12.26□□□□□ -0.45
Trappc1-204ENSMUST00000108662 HrcG5E8J6 738 aa12.23□□□□□ -0.45
Trappc1-204ENSMUST00000108662 Cep164Q5DU05 1446 aa12.22□□□□□ -0.45
Trappc1-204ENSMUST00000108662 Golga3P55937 1487 aa12.19□□□□□ -0.46
Trappc1-204ENSMUST00000108662 Ccdc18Q640L5 1455 aa12.18□□□□□ -0.46
Trappc1-204ENSMUST00000108662 Cngb1E1AZ71 1325 aa12.15□□□□□ -0.46
Trappc1-204ENSMUST00000108662 TnnQ80Z71 1560 aa12.14□□□□□ -0.47
Trappc1-204ENSMUST00000108662 Il27Q8K3I6 234 aa12.14□□□□□ -0.47
Trappc1-204ENSMUST00000108662 Top2bQ64511 1612 aa12.14□□□□□ -0.47
Trappc1-204ENSMUST00000108662 Eif4g3Q80XI3 1579 aaKnown RBP12.13□□□□□ -0.47
Trappc1-204ENSMUST00000108662 Dhx29Q6PGC1 1365 aaKnown RBP12.11□□□□□ -0.47
Trappc1-204ENSMUST00000108662 Dnajc5P60904 198 aa12.1□□□□□ -0.47
Trappc1-204ENSMUST00000108662 LrpprcQ6PB66 1392 aaKnown RBP12.08□□□□□ -0.48
Trappc1-204ENSMUST00000108662 Urb2E9Q7L1 1524 aaKnown RBP12.08□□□□□ -0.48
Trappc1-204ENSMUST00000108662 Camsap1A2AHC3 1581 aa12.08□□□□□ -0.48
Trappc1-204ENSMUST00000108662 Fmn1Q05860 1466 aa12.06□□□□□ -0.48
Trappc1-204ENSMUST00000108662 Plb1Q3TTY0 1478 aa12.06□□□□□ -0.48
Trappc1-204ENSMUST00000108662 Crocc2F6XLV1 1638 aa12.05□□□□□ -0.48
Trappc1-204ENSMUST00000108662 Shroom2A2ALU4 1481 aa12.01□□□□□ -0.49
Trappc1-204ENSMUST00000108662 PogzQ8BZH4 1409 aaKnown RBP12□□□□□ -0.49
Trappc1-204ENSMUST00000108662 Ift140E9PY46 1464 aa11.98□□□□□ -0.49
Trappc1-204ENSMUST00000108662 Ccdc88bQ4QRL3 1481 aa11.95□□□□□ -0.5
Trappc1-204ENSMUST00000108662 Duox2A2AQ99 1517 aa11.94□□□□□ -0.5
Trappc1-204ENSMUST00000108662 Rusc2Q80U22 1514 aa11.93□□□□□ -0.5
Trappc1-204ENSMUST00000108662 Grin2bQ01097 1482 aa11.91□□□□□ -0.5
Trappc1-204ENSMUST00000108662 Pabpn1Q8CCS6 302 aaKnown RBP11.91□□□□□ -0.5
Trappc1-204ENSMUST00000108662 Disp1Q3TDN0 1521 aa11.86□□□□□ -0.51
Trappc1-204ENSMUST00000108662 Efcab5A0JP43 1406 aa11.86□□□□□ -0.51
Trappc1-204ENSMUST00000108662 Pelp1Q9DBD5 1123 aaKnown RBP11.85□□□□□ -0.51
Trappc1-204ENSMUST00000108662 Pbrm1Q8BSQ9 1634 aaKnown RBP11.84□□□□□ -0.51
Trappc1-204ENSMUST00000108662 Top2aQ01320 1528 aaKnown RBP11.83□□□□□ -0.52
Trappc1-204ENSMUST00000108662 Cc2d2bA0A286YDU8 1405 aa11.83□□□□□ -0.52
Trappc1-204ENSMUST00000108662 Samd9lQ69Z37 1561 aa11.83□□□□□ -0.52
Trappc1-204ENSMUST00000108662 Col17a1Q07563 1470 aa11.83□□□□□ -0.52
Trappc1-204ENSMUST00000108662 Nup160Q9Z0W3 1402 aaKnown RBP11.81□□□□□ -0.52
Trappc1-204ENSMUST00000108662 NrkQ9R0G8 1455 aa11.78□□□□□ -0.52
Trappc1-204ENSMUST00000108662 Rad54l2Q99NG0 1466 aa11.76□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Grin2aP35436 1464 aa11.75□□□□□ -0.53
Trappc1-204ENSMUST00000108662 AqrQ8CFQ3 1481 aaKnown RBP11.74□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Zcchc11B2RX14 1644 aaKnown RBP11.74□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Gab3Q8BSM5 595 aa11.73□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Setd1bQ8CFT2 1985 aa11.73□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Magi3Q9EQJ9 1476 aa11.73□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Shroom4Q1W617 1475 aa11.72□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Fgd6Q69ZL1 1399 aa11.71□□□□□ -0.53
Trappc1-204ENSMUST00000108662 Zeb1Q64318 1117 aa11.69□□□□□ -0.54
Trappc1-204ENSMUST00000108662 SynmQ70IV5 1561 aa11.68□□□□□ -0.54
Trappc1-204ENSMUST00000108662 PtprkP35822 1457 aa11.67□□□□□ -0.54
Trappc1-204ENSMUST00000108662 Rapgef2Q8CHG7 1496 aa11.67□□□□□ -0.54
Trappc1-204ENSMUST00000108662 Pla2r1Q62028 1487 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms