RNA–Protein interactions for RNA: ENSMUST00000108627.3

Tsen34-202, Transcript of tRNA-splicing endonuclease subunit Sen34, mousemouse

TSL 1 (best) BASIC

Gene Tsen34, Length 1,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen34-202ENSMUST00000108627 Amotl2Q8K371 772 aa28.36■■■□□ 2.13
Tsen34-202ENSMUST00000108627 Ubr1O70481 1757 aa28.35■■■□□ 2.13
Tsen34-202ENSMUST00000108627 Gm21190A0A0G2JGJ6 266 aa28.35■■■□□ 2.13
Tsen34-202ENSMUST00000108627 Scn7aB1AYL1 1681 aa28.34■■■□□ 2.13
Tsen34-202ENSMUST00000108627 Ppfibp2O35711 882 aa28.34■■■□□ 2.13
Tsen34-202ENSMUST00000108627 Ankrd23Q812A3 306 aa28.34■■■□□ 2.13
Tsen34-202ENSMUST00000108627 Dennd6aQ8BH65 605 aa28.34■■■□□ 2.13
Tsen34-202ENSMUST00000108627 ClspnQ80YR7 1315 aa28.32■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Map2P20357 1828 aa28.32■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Pank3Q8R2W9 370 aa28.32■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Vps33bP59016 617 aa28.31■■■□□ 2.12
Tsen34-202ENSMUST00000108627 RgmbQ7TQ33 436 aa28.31■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Cdk12Q14AX6 1484 aaKnown RBP28.31■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Kcnq2Q9Z351 759 aa28.3■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Ppef1O35655 650 aa28.29■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Ddb1Q3U1J4 1140 aaKnown RBP28.29■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Nwd2Q6P5U7 1742 aa28.29■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Nlgn1Q99K10 843 aa28.28■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Yy1Q00899 414 aa28.27■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Plekhg5Q66T02 1073 aa28.27■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Dnajc10Q9DC23 793 aa28.27■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Nckap5lQ6GQX2 1323 aa28.27■■■□□ 2.12
Tsen34-202ENSMUST00000108627 Pim2Q62070 370 aa28.25■■■□□ 2.11
Tsen34-202ENSMUST00000108627 Inpp5dQ9ES52 1191 aa28.25■■■□□ 2.11
Tsen34-202ENSMUST00000108627 Kcnh5Q920E3 988 aa28.24■■■□□ 2.11
Tsen34-202ENSMUST00000108627 Cabp4Q8VHC5 271 aa28.23■■■□□ 2.11
Tsen34-202ENSMUST00000108627 CemipQ8BI06 1361 aa28.23■■■□□ 2.11
Tsen34-202ENSMUST00000108627 Zcwpw1Q6IR42 630 aa28.22■■■□□ 2.11
Tsen34-202ENSMUST00000108627 Bsdc1Q80Y55 427 aa28.2■■■□□ 2.11
Tsen34-202ENSMUST00000108627 Smg6P61406 1418 aaKnown RBP28.19■■■□□ 2.1
Tsen34-202ENSMUST00000108627 TnrQ8BYI9 1358 aa28.19■■■□□ 2.1
Tsen34-202ENSMUST00000108627 Dcaf11Q91VU6 549 aa28.18■■■□□ 2.1
Tsen34-202ENSMUST00000108627 FancaQ9JL70 1439 aa28.18■■■□□ 2.1
Tsen34-202ENSMUST00000108627 Zscan10Q3URR7 782 aa28.18■■■□□ 2.1
Tsen34-202ENSMUST00000108627 Uhrf1bp1lA2RSJ4 1457 aa28.17■■■□□ 2.1
Tsen34-202ENSMUST00000108627 Pak3Q61036 559 aa28.17■■■□□ 2.1
Tsen34-202ENSMUST00000108627 IbtkQ6ZPR6 1352 aaKnown RBP28.16■■■□□ 2.1
Tsen34-202ENSMUST00000108627 Fmnl2A2APV2 1086 aa28.16■■■□□ 2.1
Tsen34-202ENSMUST00000108627 TatQ8QZR1 454 aa28.16■■■□□ 2.1
Tsen34-202ENSMUST00000108627 Igf2rQ07113 2483 aaKnown RBP28.15■■■□□ 2.1
Tsen34-202ENSMUST00000108627 Arhgap33Q80YF9 1305 aa28.13■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Kif23E9Q5G3 953 aa28.13■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Scaf1Q5U4C3 1256 aaKnown RBP28.13■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Birc3O08863 600 aa28.12■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Exoc5Q3TPX4 708 aa28.12■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Ano8Q6PB70 1060 aa28.12■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Ginm1Q91WR6 327 aa28.12■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Sik1Q60670 779 aa28.11■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Aebp2Q9Z248 504 aaKnown RBP28.11■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Wdr66E9Q743 1299 aa28.1■■■□□ 2.09
Tsen34-202ENSMUST00000108627 Nol11Q8BJW5 723 aaKnown RBP28.07■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Trpc5Q9QX29 975 aa28.07■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Gprasp1Q5U4C1 1347 aa28.07■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Hoxb7P09024 217 aa28.06■■■□□ 2.08
Tsen34-202ENSMUST00000108627 AtrnQ9WU60 1428 aa28.06■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Pnpla7A2AJ88 1352 aa28.05■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Rad23bP54728 416 aa28.05■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Q8BT18 775 aa28.05■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Afg3l2Q8JZQ2 802 aaKnown RBP28.05■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Mst1rQ62190 1378 aa28.04■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Akt1s1Q9D1F4 257 aa28.03■■■□□ 2.08
Tsen34-202ENSMUST00000108627 CrklP47941 303 aa28.02■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Ciz1Q8VEH2 845 aa28.02■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Lrp5Q91VN0 1614 aa28.02■■■□□ 2.08
Tsen34-202ENSMUST00000108627 Zpr1Q62384 459 aa28.01■■■□□ 2.07
Tsen34-202ENSMUST00000108627 OptnQ8K3K8 584 aa28.01■■■□□ 2.07
Tsen34-202ENSMUST00000108627 FocadA2AKG8 1798 aa28.01■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Hirip3Q8BLH7 601 aa27.99■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Rnf180Q3U827 592 aa27.98■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Tmem132eQ6IEE6 982 aa27.98■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Ankrd13dQ6PD24 605 aa27.98■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Nsd3Q6P2L6 1439 aa27.98■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Mapk8ip2Q9ERE9 830 aa27.97■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Parp14Q2EMV9 1817 aa27.97■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Zdbf2Q5SS00 2493 aaKnown RBP27.96■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Hoxc9P09633 260 aa27.95■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Fam198bQ3UPI1 517 aa27.95■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Fchsd2Q3USJ8 740 aa27.95■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Ptpn23Q6PB44 1692 aa27.95■■■□□ 2.07
Tsen34-202ENSMUST00000108627 Emilin1Q99K41 1017 aa27.94■■■□□ 2.06
Tsen34-202ENSMUST00000108627 Sgip1Q8VD37 806 aa27.93■■■□□ 2.06
Tsen34-202ENSMUST00000108627 Slit1Q80TR4 1531 aa27.92■■■□□ 2.06
Tsen34-202ENSMUST00000108627 Kcnh4A2A5F7 1018 aa27.92■■■□□ 2.06
Tsen34-202ENSMUST00000108627 Plekhd1B2RPU2 505 aa27.92■■■□□ 2.06
Tsen34-202ENSMUST00000108627 IncenpQ9WU62 880 aa27.92■■■□□ 2.06
Tsen34-202ENSMUST00000108627 Rad17Q6NXW6 688 aa27.91■■■□□ 2.06
Tsen34-202ENSMUST00000108627 Zranb3Q6NZP1 1069 aa27.89■■■□□ 2.05
Tsen34-202ENSMUST00000108627 Egfem1Q8C088 590 aa27.89■■■□□ 2.05
Tsen34-202ENSMUST00000108627 Sos2Q02384 1333 aa27.85■■■□□ 2.05
Tsen34-202ENSMUST00000108627 Cald1E9QA15 768 aaKnown RBP27.85■■■□□ 2.05
Tsen34-202ENSMUST00000108627 Ccne1Q61457 408 aa27.85■■■□□ 2.05
Tsen34-202ENSMUST00000108627 Arfgef2A2A5R2 1792 aa27.82■■■□□ 2.04
Tsen34-202ENSMUST00000108627 TkfcQ8VC30 578 aa27.82■■■□□ 2.04
Tsen34-202ENSMUST00000108627 Cc2d1aQ8K1A6 943 aa27.79■■■□□ 2.04
Tsen34-202ENSMUST00000108627 Trim28Q62318 834 aa27.78■■■□□ 2.04
Tsen34-202ENSMUST00000108627 Ppm1fQ8CGA0 452 aa27.78■■■□□ 2.04
Tsen34-202ENSMUST00000108627 Col15a1O35206 1367 aa27.77■■■□□ 2.04
Tsen34-202ENSMUST00000108627 Kdm6aO70546 1401 aa27.77■■■□□ 2.04
Tsen34-202ENSMUST00000108627 Ppp1r15aP17564 657 aa27.76■■■□□ 2.03
Tsen34-202ENSMUST00000108627 ErfeQ6PGN1 340 aa27.76■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms