RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Q7TT23 1179 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 HdgfP51859 237 aaKnown RBP17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Kif3bQ61771 747 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ercc6lQ8BHK9 1240 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Nphp1Q9QY53 687 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Cdc45Q9Z1X9 566 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ppfibp2O35711 882 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Tex2Q6ZPJ0 1128 aaKnown RBP17.68■□□□□ 0.42
Shank1-202ENSMUST00000107935 UvssaQ9D479 717 aa17.68■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ap3b2Q9JME5 1082 aa17.68■□□□□ 0.42
Shank1-202ENSMUST00000107935 Rad54l2Q99NG0 1466 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 4921504E06RikQ8CET2 560 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Vps37cQ8R105 352 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Lemd3Q9WU40 921 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Mphosph10Q810V0 681 aaKnown RBP17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Smc1aQ9CU62 1233 aaKnown RBP17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 IqcgQ80W32 419 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Snw1Q9CSN1 536 aaKnown RBP17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Gm7361D3Z6R1 267 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Smarcc1P97496 1104 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ddx46Q569Z5 1032 aaKnown RBP17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Gnai2P08752 355 aaKnown RBP17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Sept6Q9R1T4 434 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ssr1Q9CY50 286 aaKnown RBP17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ppp2r1aQ76MZ3 589 aa17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ppm1fQ8CGA0 452 aa17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Tmx4Q8C0L0 335 aa17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Rapgef2Q8CHG7 1496 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 DonsonQ9QXP4 560 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mcm3P25206 812 aaKnown RBP17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ankrd24Q80VM7 985 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rab3gap2Q8BMG7 1366 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Cfap53Q9D439 514 aa17.63■□□□□ 0.41
Shank1-202ENSMUST00000107935 Arhgef18Q6P9R4 1021 aa17.63■□□□□ 0.41
Shank1-202ENSMUST00000107935 Nucb2P81117 420 aa17.63■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ppip5k2Q6ZQB6 1129 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ccdc93Q7TQK5 629 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Abl1P00520 1123 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ncapg2Q6DFV1 1138 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Chmp7Q8R1T1 451 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Paip2Q9D6V8 124 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Dync1i1O88485 628 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Clul1Q3ZRW6 464 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Agtpbp1Q641K1 1218 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ccdc158Q8CDI6 1109 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Atp2b2Q9R0K7 1198 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Sparcl1P70663 650 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Fsd1Q7TPM6 496 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 CarsQ9ER72 831 aaKnown RBP17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Shtn1Q8K2Q9 631 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Fbf1A2A870 1173 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 4931400O07RikQ9D4M5 137 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 RalylQ8BTF8 293 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Fam107bQ3TGF2 131 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mink1Q9JM52 1308 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Gtpbp4Q99ME9 634 aaKnown RBP17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Luzp1Q8R4U7 1068 aaKnown RBP17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 Gm1979E9QAN3 267 aa17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 Gsdma3Q5Y4Y6 464 aa17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 StambpQ9CQ26 424 aa17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 ScaperF8VQ70 1398 aaKnown RBP17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Plekhd1B2RPU2 505 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Lmbr1Q9JIT0 490 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mmel1Q9JLI3 765 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Homer1Q9Z2Y3 366 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mcm6P97311 821 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rbm27Q5SFM8 1060 aaKnown RBP17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rassf4Q8CB96 322 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rufy2Q8R4C2 606 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Cdkl5Q3UTQ8 938 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 BcanQ61361 883 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ddx58Q6Q899 926 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Vps18Q8R307 973 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Cyp26c1B2RXA7 518 aa17.58■□□□□ 0.4
Shank1-202ENSMUST00000107935 Fam114a1Q9D281 569 aa17.58■□□□□ 0.4
Shank1-202ENSMUST00000107935 Sel1lQ9Z2G6 790 aa17.58■□□□□ 0.4
Shank1-202ENSMUST00000107935 Zbtb22Q9Z0G7 638 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Nbr1P97432 988 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Rasa1E9PYG6 1038 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ppp1r9bQ6R891 817 aaKnown RBP17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Znf131Q8K3J5 619 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Iqca1Q9CUL5 857 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ktn1Q61595 1327 aaKnown RBP17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Nol7Q9D7Z3 254 aaKnown RBP17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Terf2O35144 541 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Cavin4A2AMM0 362 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Iffo1Q8BXL9 562 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Stx1aO35526 288 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Top1mtQ8R4U6 593 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Zkscan7E9PVW1 718 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Tmc2Q8R4P4 888 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Bag4Q8CI61 457 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Bcl2l13P59017 434 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Naa15Q80UM3 865 aaKnown RBP17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Fam177a1Q8BR63 207 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 ZwintQ9CQU5 252 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Gbp2Q9Z0E6 589 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Efcab5A0JP43 1406 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Cers3Q1A3B0 383 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Shq1Q7TMX5 569 aa17.54■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 132.6 ms