RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Q7TT23 1179 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 HdgfP51859 237 aaKnown RBP17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Kif3bQ61771 747 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ercc6lQ8BHK9 1240 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Nphp1Q9QY53 687 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Cdc45Q9Z1X9 566 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ppfibp2O35711 882 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Tex2Q6ZPJ0 1128 aaKnown RBP17.68■□□□□ 0.42
Shank1-202ENSMUST00000107935 UvssaQ9D479 717 aa17.68■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ap3b2Q9JME5 1082 aa17.68■□□□□ 0.42
Shank1-202ENSMUST00000107935 Rad54l2Q99NG0 1466 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 4921504E06RikQ8CET2 560 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Vps37cQ8R105 352 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Lemd3Q9WU40 921 aa17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Mphosph10Q810V0 681 aaKnown RBP17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 Smc1aQ9CU62 1233 aaKnown RBP17.67■□□□□ 0.42
Shank1-202ENSMUST00000107935 IqcgQ80W32 419 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Snw1Q9CSN1 536 aaKnown RBP17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Gm7361D3Z6R1 267 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Smarcc1P97496 1104 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ddx46Q569Z5 1032 aaKnown RBP17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Gnai2P08752 355 aaKnown RBP17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Sept6Q9R1T4 434 aa17.66■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ssr1Q9CY50 286 aaKnown RBP17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ppp2r1aQ76MZ3 589 aa17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ppm1fQ8CGA0 452 aa17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Tmx4Q8C0L0 335 aa17.65■□□□□ 0.42
Shank1-202ENSMUST00000107935 Rapgef2Q8CHG7 1496 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 DonsonQ9QXP4 560 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mcm3P25206 812 aaKnown RBP17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ankrd24Q80VM7 985 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rab3gap2Q8BMG7 1366 aa17.64■□□□□ 0.41
Shank1-202ENSMUST00000107935 Cfap53Q9D439 514 aa17.63■□□□□ 0.41
Shank1-202ENSMUST00000107935 Arhgef18Q6P9R4 1021 aa17.63■□□□□ 0.41
Shank1-202ENSMUST00000107935 Nucb2P81117 420 aa17.63■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ppip5k2Q6ZQB6 1129 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ccdc93Q7TQK5 629 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Abl1P00520 1123 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ncapg2Q6DFV1 1138 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Chmp7Q8R1T1 451 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Paip2Q9D6V8 124 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Dync1i1O88485 628 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Clul1Q3ZRW6 464 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Agtpbp1Q641K1 1218 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ccdc158Q8CDI6 1109 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Atp2b2Q9R0K7 1198 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Sparcl1P70663 650 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Fsd1Q7TPM6 496 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 CarsQ9ER72 831 aaKnown RBP17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Shtn1Q8K2Q9 631 aa17.62■□□□□ 0.41
Shank1-202ENSMUST00000107935 Fbf1A2A870 1173 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 4931400O07RikQ9D4M5 137 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 RalylQ8BTF8 293 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Fam107bQ3TGF2 131 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mink1Q9JM52 1308 aa17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Gtpbp4Q99ME9 634 aaKnown RBP17.61■□□□□ 0.41
Shank1-202ENSMUST00000107935 Luzp1Q8R4U7 1068 aaKnown RBP17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 Gm1979E9QAN3 267 aa17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 Gsdma3Q5Y4Y6 464 aa17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 StambpQ9CQ26 424 aa17.6■□□□□ 0.41
Shank1-202ENSMUST00000107935 ScaperF8VQ70 1398 aaKnown RBP17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Plekhd1B2RPU2 505 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Lmbr1Q9JIT0 490 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mmel1Q9JLI3 765 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Homer1Q9Z2Y3 366 aa17.59■□□□□ 0.41
Shank1-202ENSMUST00000107935 Mcm6P97311 821 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rbm27Q5SFM8 1060 aaKnown RBP17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rassf4Q8CB96 322 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Rufy2Q8R4C2 606 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Cdkl5Q3UTQ8 938 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 BcanQ61361 883 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Ddx58Q6Q899 926 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Vps18Q8R307 973 aa17.58■□□□□ 0.41
Shank1-202ENSMUST00000107935 Cyp26c1B2RXA7 518 aa17.58■□□□□ 0.4
Shank1-202ENSMUST00000107935 Fam114a1Q9D281 569 aa17.58■□□□□ 0.4
Shank1-202ENSMUST00000107935 Sel1lQ9Z2G6 790 aa17.58■□□□□ 0.4
Shank1-202ENSMUST00000107935 Zbtb22Q9Z0G7 638 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Nbr1P97432 988 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Rasa1E9PYG6 1038 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ppp1r9bQ6R891 817 aaKnown RBP17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Znf131Q8K3J5 619 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Iqca1Q9CUL5 857 aa17.57■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ktn1Q61595 1327 aaKnown RBP17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Nol7Q9D7Z3 254 aaKnown RBP17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Terf2O35144 541 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Cavin4A2AMM0 362 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Iffo1Q8BXL9 562 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Stx1aO35526 288 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Top1mtQ8R4U6 593 aa17.56■□□□□ 0.4
Shank1-202ENSMUST00000107935 Zkscan7E9PVW1 718 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Tmc2Q8R4P4 888 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Bag4Q8CI61 457 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Bcl2l13P59017 434 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Naa15Q80UM3 865 aaKnown RBP17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Fam177a1Q8BR63 207 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 ZwintQ9CQU5 252 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Gbp2Q9Z0E6 589 aa17.55■□□□□ 0.4
Shank1-202ENSMUST00000107935 Efcab5A0JP43 1406 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Cers3Q1A3B0 383 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Shq1Q7TMX5 569 aa17.54■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms