RNA–Protein interactions for RNA: ENSMUST00000107802.7

Trim59-201, Transcript of Tripartite motif-containing protein 59, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim59, Length 2,939 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim59-201ENSMUST00000107802 Vgll3P85442 326 aa17.28■□□□□ 0.36
Trim59-201ENSMUST00000107802 Isy1Q69ZQ2 285 aaKnown RBP17.28■□□□□ 0.36
Trim59-201ENSMUST00000107802 Atxn3Q9CVD2 355 aa17.27■□□□□ 0.36
Trim59-201ENSMUST00000107802 Kif1aP33173 1695 aa17.27■□□□□ 0.36
Trim59-201ENSMUST00000107802 Uhrf1bp1B2KF50 1429 aa17.27■□□□□ 0.35
Trim59-201ENSMUST00000107802 BccipQ9CWI3 316 aa17.27■□□□□ 0.35
Trim59-201ENSMUST00000107802 Slit3Q9WVB4 1523 aa17.26■□□□□ 0.35
Trim59-201ENSMUST00000107802 Tsen2Q6P7W5 460 aa17.26■□□□□ 0.35
Trim59-201ENSMUST00000107802 Fam135bQ9DAI6 1403 aa17.26■□□□□ 0.35
Trim59-201ENSMUST00000107802 Mknk2Q8CDB0 459 aa17.25■□□□□ 0.35
Trim59-201ENSMUST00000107802 Dmrtc1Q9D9R7 182 aa17.24■□□□□ 0.35
Trim59-201ENSMUST00000107802 Gys2Q8VCB3 704 aa17.24■□□□□ 0.35
Trim59-201ENSMUST00000107802 Map3k19E9Q3S4 1311 aa17.24■□□□□ 0.35
Trim59-201ENSMUST00000107802 Gse1Q3U3C9 1213 aa17.23■□□□□ 0.35
Trim59-201ENSMUST00000107802 U2af1Q9D883 239 aaKnown RBP17.23■□□□□ 0.35
Trim59-201ENSMUST00000107802 Phlpp2Q8BXA7 1320 aa17.23■□□□□ 0.35
Trim59-201ENSMUST00000107802 Nectin2P32507 530 aa17.23■□□□□ 0.35
Trim59-201ENSMUST00000107802 Znf316Q6PGE4 1016 aa17.23■□□□□ 0.35
Trim59-201ENSMUST00000107802 Apaf1O88879 1249 aa17.22■□□□□ 0.35
Trim59-201ENSMUST00000107802 Ppp1r3fQ9JIG4 799 aa17.22■□□□□ 0.35
Trim59-201ENSMUST00000107802 Rsph3aQ3UFY4 516 aa17.22■□□□□ 0.35
Trim59-201ENSMUST00000107802 Trim28Q62318 834 aa17.22■□□□□ 0.35
Trim59-201ENSMUST00000107802 PtpruB1AUH1 1446 aa17.21■□□□□ 0.35
Trim59-201ENSMUST00000107802 Ciz1Q8VEH2 845 aa17.21■□□□□ 0.35
Trim59-201ENSMUST00000107802 Arap3Q8R5G7 1538 aa17.21■□□□□ 0.35
Trim59-201ENSMUST00000107802 TimelessQ9R1X4 1197 aa17.2■□□□□ 0.34
Trim59-201ENSMUST00000107802 Pik3c2bE9QAN8 1632 aa17.2■□□□□ 0.34
Trim59-201ENSMUST00000107802 Tnrc6bQ8BKI2 1810 aaKnown RBP17.2■□□□□ 0.34
Trim59-201ENSMUST00000107802 Asxl2Q8BZ32 1370 aa17.2■□□□□ 0.34
Trim59-201ENSMUST00000107802 Tnnt2P50752 301 aa17.2■□□□□ 0.34
Trim59-201ENSMUST00000107802 Dip2bQ3UH60 1574 aa17.19■□□□□ 0.34
Trim59-201ENSMUST00000107802 Rangap1P46061 589 aaKnown RBP17.19■□□□□ 0.34
Trim59-201ENSMUST00000107802 Atl3Q91YH5 541 aa17.19■□□□□ 0.34
Trim59-201ENSMUST00000107802 Ush1cQ9ES64 910 aa17.19■□□□□ 0.34
Trim59-201ENSMUST00000107802 Pik3r4Q8VD65 1358 aa17.19■□□□□ 0.34
Trim59-201ENSMUST00000107802 AU019823E9PUQ3 292 aa17.18■□□□□ 0.34
Trim59-201ENSMUST00000107802 PaskQ8CEE6 1383 aa17.18■□□□□ 0.34
Trim59-201ENSMUST00000107802 IghaA0A0A6YXW6 389 aa17.18■□□□□ 0.34
Trim59-201ENSMUST00000107802 Lekr1B2RVN1 116 aa17.17■□□□□ 0.34
Trim59-201ENSMUST00000107802 Fbxo2Q80UW2 297 aa17.17■□□□□ 0.34
Trim59-201ENSMUST00000107802 Atp7bQ64446 1462 aa17.17■□□□□ 0.34
Trim59-201ENSMUST00000107802 Cog6Q8R3I3 657 aa17.17■□□□□ 0.34
Trim59-201ENSMUST00000107802 Mdc1Q5PSV9 1707 aa17.16■□□□□ 0.34
Trim59-201ENSMUST00000107802 Spef2Q8C9J3 1734 aa17.16■□□□□ 0.34
Trim59-201ENSMUST00000107802 Pank2Q3U4S0 443 aa17.16■□□□□ 0.34
Trim59-201ENSMUST00000107802 PtmaP26350 111 aa17.16■□□□□ 0.34
Trim59-201ENSMUST00000107802 Tmx3Q8BXZ1 456 aa17.15■□□□□ 0.34
Trim59-201ENSMUST00000107802 Kif18aQ91WD7 886 aa17.15■□□□□ 0.34
Trim59-201ENSMUST00000107802 Fchsd2Q3USJ8 740 aa17.15■□□□□ 0.34
Trim59-201ENSMUST00000107802 N4bp2F8VQG7 1678 aaKnown RBP17.15■□□□□ 0.34
Trim59-201ENSMUST00000107802 Cavin4A2AMM0 362 aa17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Gzf1Q4VBD9 706 aa17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Idi2Q8BFZ6 227 aa17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Dnajc5gQ8C632 165 aa17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Ttc21aQ8C0S4 1314 aa17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Aplp1Q03157 653 aa17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Ksr2Q3UVC0 959 aa17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Ccar1Q8CH18 1146 aaKnown RBP17.14■□□□□ 0.33
Trim59-201ENSMUST00000107802 Psme1P97371 249 aa17.13■□□□□ 0.33
Trim59-201ENSMUST00000107802 Q4VA45 678 aa17.13■□□□□ 0.33
Trim59-201ENSMUST00000107802 GorabQ8BRM2 368 aa17.13■□□□□ 0.33
Trim59-201ENSMUST00000107802 Fam43aQ8BUP8 424 aa17.13■□□□□ 0.33
Trim59-201ENSMUST00000107802 Map7O88735 730 aa17.13■□□□□ 0.33
Trim59-201ENSMUST00000107802 Slc12a5Q91V14 1138 aa17.13■□□□□ 0.33
Trim59-201ENSMUST00000107802 Tfip11Q9ERA6 838 aaKnown RBP17.13■□□□□ 0.33
Trim59-201ENSMUST00000107802 Becn1O88597 448 aa17.12■□□□□ 0.33
Trim59-201ENSMUST00000107802 Chd4Q6PDQ2 1915 aaKnown RBP17.12■□□□□ 0.33
Trim59-201ENSMUST00000107802 Ankrd50F7BE84 1390 aa17.12■□□□□ 0.33
Trim59-201ENSMUST00000107802 PzpQ61838 1495 aa17.12■□□□□ 0.33
Trim59-201ENSMUST00000107802 Bloc1s4Q8VED2 215 aa17.11■□□□□ 0.33
Trim59-201ENSMUST00000107802 Dnajc14Q921R4 703 aa17.11■□□□□ 0.33
Trim59-201ENSMUST00000107802 Ppp1r15aP17564 657 aa17.11■□□□□ 0.33
Trim59-201ENSMUST00000107802 Txndc2Q6P902 515 aa17.11■□□□□ 0.33
Trim59-201ENSMUST00000107802 Pdcl2Q78Y63 240 aa17.11■□□□□ 0.33
Trim59-201ENSMUST00000107802 NalcnQ8BXR5 1738 aa17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Rbm25B2RY56 838 aaKnown RBP17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Ythdc1E9Q5K9 736 aaKnown RBP17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Gm10093D3YYI8 482 aa17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Hdac1O09106 482 aaKnown RBP17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Sirt1Q923E4 737 aa17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Med1Q925J9 1575 aa17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Pnma3Q8JZW8 466 aa17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Znf330Q922H9 316 aa17.1■□□□□ 0.33
Trim59-201ENSMUST00000107802 Fez1Q8K0X8 392 aa17.09■□□□□ 0.33
Trim59-201ENSMUST00000107802 CastP51125 788 aa17.09■□□□□ 0.33
Trim59-201ENSMUST00000107802 Bag4Q8CI61 457 aa17.08■□□□□ 0.33
Trim59-201ENSMUST00000107802 PalmQ9Z0P4 383 aa17.08■□□□□ 0.33
Trim59-201ENSMUST00000107802 Lmod3E9QA62 571 aa17.08■□□□□ 0.32
Trim59-201ENSMUST00000107802 Hoxb7P09024 217 aa17.08■□□□□ 0.32
Trim59-201ENSMUST00000107802 D430041D05RikF6ZGR6 1678 aa17.08■□□□□ 0.32
Trim59-201ENSMUST00000107802 Rreb1Q3UH06 1700 aaKnown RBP17.08■□□□□ 0.32
Trim59-201ENSMUST00000107802 Lmtk3Q5XJV6 1424 aa17.07■□□□□ 0.32
Trim59-201ENSMUST00000107802 Uhrf1bp1lA2RSJ4 1457 aa17.07■□□□□ 0.32
Trim59-201ENSMUST00000107802 Rims2Q9EQZ7 1530 aa17.07■□□□□ 0.32
Trim59-201ENSMUST00000107802 CatipB9EKE5 520 aa17.07■□□□□ 0.32
Trim59-201ENSMUST00000107802 Stk11ipQ3TAA7 1072 aa17.06■□□□□ 0.32
Trim59-201ENSMUST00000107802 Mon2Q80TL7 1715 aa17.05■□□□□ 0.32
Trim59-201ENSMUST00000107802 Swt1Q9DBQ9 907 aa17.04■□□□□ 0.32
Trim59-201ENSMUST00000107802 Fam13bQ8K2H3 851 aa17.04■□□□□ 0.32
Trim59-201ENSMUST00000107802 Ccdc171E9Q1U1 1324 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms