RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Nap1l1P28656 391 aaKnown RBP12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Mphosph10Q810V0 681 aaKnown RBP12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 TkfcQ8VC30 578 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Kif18aQ91WD7 886 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Polr3gQ6NXY9 223 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Sycp1Q62209 993 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 MvpQ9EQK5 861 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Slx4Q6P1D7 1565 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Mum1Q6DID5 682 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Mug1P28665 1476 aa12.33□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Taok2Q6ZQ29 1240 aa12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Mrvi1Q9WUX5 899 aaKnown RBP12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Wdr33Q8K4P0 1330 aaKnown RBP12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Arhgef12Q8R4H2 1543 aaKnown RBP12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Cc2d1aQ8K1A6 943 aa12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Rufy2Q8R4C2 606 aa12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 MicalclQ9D5U9 680 aa12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Pmfbp1Q9WVQ0 1022 aa12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Rbm28Q8CGC6 750 aaKnown RBP12.33□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Polr3aB2RXC6 1390 aa12.32□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Mctp2Q5RJH2 878 aa12.32□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Stk38Q91VJ4 465 aa12.32□□□□□ -0.44
Scn8a-201ENSMUST00000082209 CenpqQ9CPQ5 267 aa12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 MlecQ6ZQI3 291 aaKnown RBP12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 CarsQ9ER72 831 aaKnown RBP12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Znf287Q9EQB9 759 aa12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Cdc45Q9Z1X9 566 aa12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Zeb2Q9R0G7 1215 aa12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Agtpbp1Q641K1 1218 aa12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Ccdc83Q9D4V3 305 aa12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Rbm27Q5SFM8 1060 aaKnown RBP12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Flad1Q8R123 492 aa12.31□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Adck5Q80V03 582 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Nap1l5Q9JJF0 156 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Cfap65Q3V0B4 1847 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Anapc15-psA0A140T8L6 141 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Ccdc39Q9D5Y1 937 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 A2mQ6GQT1 1474 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Slc4a2P13808 1237 aaKnown RBP12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Smg7Q5RJH6 1138 aaKnown RBP12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 ImmtQ8CAQ8 757 aaKnown RBP12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Ankrd1Q9CR42 319 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Ncoa1P70365 1447 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Mybbp1aQ7TPV4 1344 aaKnown RBP12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Pik3c2gO70167 1506 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Lmo7E9PYF4 1699 aaKnown RBP12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Cfap74Q3UY96 1578 aa12.3□□□□□ -0.44
Scn8a-201ENSMUST00000082209 NefhP19246 1090 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Tubb4bP68372 445 aaKnown RBP12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Srgap3Q812A2 1099 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Hook3Q8BUK6 718 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Tango6Q8C3S2 1079 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 WizO88286 1684 aaKnown RBP12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Erlin1Q91X78 346 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 ImpactO55091 318 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Trap1aP19473 224 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Trim34bJ3QNR8 485 aa12.29□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Eva1cP58659 440 aa12.28□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Zscan20B2KFW1 1030 aa12.28□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Smtnl1Q99LM3 459 aa12.28□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Trim55G3X8Y1 545 aa12.28□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Abcf1Q6P542 837 aaKnown RBP12.28□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Cnnm3Q32NY4 713 aa12.28□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Fam193aQ8CGI1 1231 aaKnown RBP12.28□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Kdm5aQ3UXZ9 1690 aa12.27□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Gapvd1Q6PAR5 1458 aa12.27□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Fam13bQ8K2H3 851 aa12.27□□□□□ -0.44
Scn8a-201ENSMUST00000082209 Aldh1l1Q8R0Y6 902 aa12.27□□□□□ -0.44
Scn8a-201ENSMUST00000082209 AI481877A2ALV5 1481 aa12.27□□□□□ -0.45
Scn8a-201ENSMUST00000082209 TxlnaQ6PAM1 554 aaKnown RBP12.27□□□□□ -0.45
Scn8a-201ENSMUST00000082209 BicraF8VPZ9 1578 aa12.27□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Brms1Q99N20 246 aa12.27□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Ipo4Q8VI75 1082 aa12.27□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Tmc1Q8R4P5 757 aa12.26□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Kdm3aQ6PCM1 1323 aa12.26□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Gm7361D3Z6R1 267 aa12.26□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Abcc5Q9R1X5 1436 aa12.26□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Dennd6aQ8BH65 605 aa12.26□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Tubb4aQ9D6F9 444 aa12.26□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Kcnh5Q920E3 988 aa12.26□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Grin2aP35436 1464 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 TbcaP48428 108 aaKnown RBP12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cers3Q1A3B0 383 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Ccdc191J3QQ27 883 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Arglu1Q3UL36 271 aaKnown RBP12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Bms1Q6PGF5 1284 aaKnown RBP12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Slu7Q8BHJ9 585 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Washc4Q3UMB9 1173 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Commd10Q8JZY2 202 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Dusp27Q148W8 1138 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cdca8Q8BHX3 289 aa12.25□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Senp3Q9EP97 568 aaKnown RBP12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Pik3r4Q8VD65 1358 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 TnnQ80Z71 1560 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Ddx46Q569Z5 1032 aaKnown RBP12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Strn4P58404 760 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cfap53Q9D439 514 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Kcnh8P59111 1102 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Gtf2f1Q3THK3 508 aaKnown RBP12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Lrriq1Q0P5X1 1673 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms