RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Gapvd1Q6PAR5 1458 aa19.47■□□□□ 0.71
Col18a1-202ENSMUST00000081654 Gsdma2Q32M21 443 aa19.47■□□□□ 0.71
Col18a1-202ENSMUST00000081654 CarsQ9ER72 831 aaKnown RBP19.47■□□□□ 0.71
Col18a1-202ENSMUST00000081654 Eif4g1Q6NZJ6 1600 aaKnown RBP19.46■□□□□ 0.71
Col18a1-202ENSMUST00000081654 Wdr78E9PYY5 807 aa19.46■□□□□ 0.71
Col18a1-202ENSMUST00000081654 PdcQ9QW08 244 aa19.46■□□□□ 0.71
Col18a1-202ENSMUST00000081654 Mapkbp1Q6NS57 1503 aa19.46■□□□□ 0.71
Col18a1-202ENSMUST00000081654 Aldh1l1Q8R0Y6 902 aa19.46■□□□□ 0.71
Col18a1-202ENSMUST00000081654 Ppp4r3bQ922R5 820 aa19.46■□□□□ 0.71
Col18a1-202ENSMUST00000081654 EzrP26040 586 aaKnown RBP19.45■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Idi2Q8BFZ6 227 aa19.45■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Map3k13Q1HKZ5 959 aa19.44■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Maco1Q7TQE6 664 aaKnown RBP19.44■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Necab1Q8BG18 352 aa19.44■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Jakmip1Q8BVL9 626 aa19.44■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Slx4Q6P1D7 1565 aa19.44■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Drc7Q6V3W6 876 aa19.44■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Fam50bQ9WTJ8 334 aa19.43■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Pik3c2gO70167 1506 aa19.43■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Fkbp5Q64378 456 aa19.43■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Stk11ipQ3TAA7 1072 aa19.43■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Elp1Q7TT37 1333 aaKnown RBP19.42■□□□□ 0.7
Col18a1-202ENSMUST00000081654 TbcaP48428 108 aaKnown RBP19.42■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Top1mtQ8R4U6 593 aa19.42■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Ncoa1P70365 1447 aa19.41■□□□□ 0.7
Col18a1-202ENSMUST00000081654 NgdnQ9DB96 315 aaKnown RBP19.41■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Pde4bB1AWC9 736 aa19.41■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Ncoa3O09000 1398 aa19.41■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Stk38Q91VJ4 465 aa19.41■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Nlrp3Q8R4B8 1033 aa19.4■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Gcom1E9PZ54 550 aa19.4■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Fbln2P37889 1221 aa19.4■□□□□ 0.7
Col18a1-202ENSMUST00000081654 MyzapQ3UIJ9 466 aa19.4■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Mum1Q6DID5 682 aa19.4■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Ptpdc1Q6NZK8 747 aa19.4■□□□□ 0.7
Col18a1-202ENSMUST00000081654 Ell2Q3UKU1 639 aa19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Ankib1Q6ZPS6 1085 aa19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 ScaperF8VQ70 1398 aaKnown RBP19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Wwc1Q5SXA9 1104 aa19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Nol11Q8BJW5 723 aaKnown RBP19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Naip5Q9R016 1403 aa19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Hmgb2P30681 210 aaKnown RBP19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Thoc2B1AZI6 1594 aaKnown RBP19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 GnpatP98192 678 aa19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Dixdc1Q80Y83 711 aa19.39■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Cct4P80315 539 aaKnown RBP19.38■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Ccdc34Q3UI66 367 aa19.38■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Ncbp1Q3UYV9 790 aaKnown RBP19.38■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Sel1lQ9Z2G6 790 aa19.38■□□□□ 0.69
Col18a1-202ENSMUST00000081654 RalgapbQ8BQZ4 1484 aa19.38■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Krt84Q99M73 603 aa19.38■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Erc1Q99MI1 1120 aa19.38■□□□□ 0.69
Col18a1-202ENSMUST00000081654 TimelessQ9R1X4 1197 aa19.37■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Taf3Q5HZG4 932 aa19.37■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Ccne1Q61457 408 aa19.37■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Gtf3c3Q3TMP1 882 aa19.36■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Rnf214Q8BFU3 668 aaKnown RBP19.36■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Riok1Q922Q2 567 aa19.36■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Slc12a5Q91V14 1138 aa19.36■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Klf15Q9EPW2 415 aa19.36■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Slc5a1Q8C3K6 665 aa19.36■□□□□ 0.69
Col18a1-202ENSMUST00000081654 ImmtQ8CAQ8 757 aaKnown RBP19.36■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Zmym3Q9JLM4 1370 aa19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Ythdc2B2RR83 1445 aaKnown RBP19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Plekhm2Q80TQ5 1018 aa19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Tmc1Q8R4P5 757 aa19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Atp7aQ64430 1491 aa19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Hs1bp3Q3TC93 395 aa19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Znhit6Q3UFB2 460 aaKnown RBP19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Cdkl5Q3UTQ8 938 aa19.35■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Kdm5bQ80Y84 1544 aa19.34■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Sugp2Q8CH09 1067 aa19.34■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Cep131Q62036 1060 aa19.33■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Cep57l1Q8VDS7 400 aa19.33■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Sptbn5F6UCX4 1208 aa19.33■□□□□ 0.69
Col18a1-202ENSMUST00000081654 Ftsj3Q9DBE9 838 aaKnown RBP19.33■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Fsd1Q7TPM6 496 aa19.33■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Farp2Q91VS8 1065 aa19.33■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Cdc45Q9Z1X9 566 aa19.33■□□□□ 0.68
Col18a1-202ENSMUST00000081654 NinlQ6ZQ12 1394 aa19.33■□□□□ 0.68
Col18a1-202ENSMUST00000081654 BC005561E9Q5E2 1589 aa19.33■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Gm156Q58A37 223 aa19.32■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Jmjd4Q8BFT6 427 aa19.32■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Cfap69Q8BH53 942 aa19.32■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Fsd2Q8BZ52 692 aa19.32■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Dnajc5bQ9CQ94 199 aa19.32■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Hoxb7P09024 217 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Ppip5k2Q6ZQB6 1129 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Dmrt2Q8BG36 561 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Atxn3Q9CVD2 355 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Wdhd1P59328 1117 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 L3mbtl2P59178 703 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Cnnm3Q32NY4 713 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Krt85Q9Z2T6 507 aa19.31■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Babam1Q3UI43 333 aa19.3■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Slc26a8Q8R0C3 999 aa19.3■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Rrs1Q9CYH6 365 aaKnown RBP19.3■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Ppp6r1Q7TSI3 856 aa19.3■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Irgm2A0A140LIF8 407 aa19.3■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Prkar2bP31324 416 aa19.3■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms