RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Cplx1P63040 134 aa22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 Tmx3Q8BXZ1 456 aa22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 Atp7aQ64430 1491 aa22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 TnnQ80Z71 1560 aa22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 Neurod6P48986 337 aa22.47■■□□□ 1.19
Upf1-201ENSMUST00000075666 Tpm1P58771 284 aa22.47■■□□□ 1.19
Upf1-201ENSMUST00000075666 Cplx2P84086 134 aa22.47■■□□□ 1.19
Upf1-201ENSMUST00000075666 Cdk13Q69ZA1 1511 aaKnown RBP22.47■■□□□ 1.19
Upf1-201ENSMUST00000075666 Pof1bQ8K4L4 587 aa22.47■■□□□ 1.19
Upf1-201ENSMUST00000075666 Krt85Q9Z2T6 507 aa22.47■■□□□ 1.19
Upf1-201ENSMUST00000075666 Caskin1Q6P9K8 1431 aa22.47■■□□□ 1.19
Upf1-201ENSMUST00000075666 Cdk19Q8BWD8 501 aa22.46■■□□□ 1.19
Upf1-201ENSMUST00000075666 Otud6bQ8K2H2 294 aa22.46■■□□□ 1.19
Upf1-201ENSMUST00000075666 Wdr78E9PYY5 807 aa22.46■■□□□ 1.19
Upf1-201ENSMUST00000075666 IbtkQ6ZPR6 1352 aaKnown RBP22.46■■□□□ 1.19
Upf1-201ENSMUST00000075666 Sass6Q80UK7 654 aa22.46■■□□□ 1.19
Upf1-201ENSMUST00000075666 Top1mtQ8R4U6 593 aa22.45■■□□□ 1.19
Upf1-201ENSMUST00000075666 Zmym3Q9JLM4 1370 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 Ggnbp2Q5SV77 696 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 Ift57Q8BXG3 429 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 Serpina10Q8R121 448 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 Sos1Q62245 1319 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 Cfap99A0A140LIX9 648 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 NinlQ6ZQ12 1394 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 Plb1Q3TTY0 1478 aa22.45■■□□□ 1.18
Upf1-201ENSMUST00000075666 EvcP57680 1005 aa22.44■■□□□ 1.18
Upf1-201ENSMUST00000075666 Mphosph10Q810V0 681 aaKnown RBP22.43■■□□□ 1.18
Upf1-201ENSMUST00000075666 Ppp1r18Q8BQ30 594 aa22.43■■□□□ 1.18
Upf1-201ENSMUST00000075666 Ttc21bQ0HA38 1315 aa22.43■■□□□ 1.18
Upf1-201ENSMUST00000075666 Ccdc47Q9D024 483 aaKnown RBP22.43■■□□□ 1.18
Upf1-201ENSMUST00000075666 Peg3Q3URU2 1571 aa22.42■■□□□ 1.18
Upf1-201ENSMUST00000075666 Hoxa7P02830 229 aa22.42■■□□□ 1.18
Upf1-201ENSMUST00000075666 Cwc15Q9JHS9 229 aaKnown RBP22.42■■□□□ 1.18
Upf1-201ENSMUST00000075666 LifrP42703 1092 aa22.42■■□□□ 1.18
Upf1-201ENSMUST00000075666 Ddx19aQ61655 478 aaKnown RBP22.42■■□□□ 1.18
Upf1-201ENSMUST00000075666 Grin2aP35436 1464 aa22.42■■□□□ 1.18
Upf1-201ENSMUST00000075666 Gjb2Q00977 226 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Q8C5K5 320 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Slc12a5Q91V14 1138 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Tmco3Q8BH01 678 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Chd1lQ9CXF7 900 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Slc52a2Q9D8F3 450 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Sytl4Q9R0Q1 673 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Wdr33Q8K4P0 1330 aaKnown RBP22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Cep57l1Q8VDS7 400 aa22.41■■□□□ 1.18
Upf1-201ENSMUST00000075666 Mmel1Q9JLI3 765 aa22.4■■□□□ 1.18
Upf1-201ENSMUST00000075666 Bcar3Q9QZK2 820 aa22.4■■□□□ 1.18
Upf1-201ENSMUST00000075666 Zbtb22Q9Z0G7 638 aa22.4■■□□□ 1.18
Upf1-201ENSMUST00000075666 Fam135bQ9DAI6 1403 aa22.4■■□□□ 1.18
Upf1-201ENSMUST00000075666 Lmtk2Q3TYD6 1471 aa22.4■■□□□ 1.18
Upf1-201ENSMUST00000075666 Trim27Q62158 513 aa22.4■■□□□ 1.18
Upf1-201ENSMUST00000075666 Ppp6r1Q7TSI3 856 aa22.4■■□□□ 1.18
Upf1-201ENSMUST00000075666 Zkscan7E9PVW1 718 aa22.39■■□□□ 1.18
Upf1-201ENSMUST00000075666 Strn4P58404 760 aa22.39■■□□□ 1.17
Upf1-201ENSMUST00000075666 A0A0U1RNP2 1173 aa22.38■■□□□ 1.17
Upf1-201ENSMUST00000075666 Ccdc178Q8CDV0 866 aa22.38■■□□□ 1.17
Upf1-201ENSMUST00000075666 CenppQ9CZ92 286 aa22.38■■□□□ 1.17
Upf1-201ENSMUST00000075666 FanclQ9CR14 375 aa22.38■■□□□ 1.17
Upf1-201ENSMUST00000075666 Q4VA45 678 aa22.38■■□□□ 1.17
Upf1-201ENSMUST00000075666 Cfap58B2RW38 873 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Nucb2P81117 420 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Gzf1Q4VBD9 706 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Evc2Q8K1G2 1220 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Adgrb2Q8CGM1 1561 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Zhx1P70121 873 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Dnaaf4Q8R368 420 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Tubb6Q922F4 447 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Bcl2l13P59017 434 aa22.37■■□□□ 1.17
Upf1-201ENSMUST00000075666 Ccdc102aQ3TMW1 549 aa22.36■■□□□ 1.17
Upf1-201ENSMUST00000075666 Ppp1r42Q8R1Z4 357 aa22.36■■□□□ 1.17
Upf1-201ENSMUST00000075666 Gadd45bP22339 160 aa22.36■■□□□ 1.17
Upf1-201ENSMUST00000075666 Dhx16G3X8X0 1044 aaKnown RBP22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Tshz3Q8CGV9 1081 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Ccdc94Q9D6J3 314 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 LlphQ9D945 130 aaKnown RBP22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Gcom1E9PZ54 550 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Pdia3P27773 505 aaKnown RBP22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Ube2hP62257 183 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 MyzapQ3UIJ9 466 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Gsdma3Q5Y4Y6 464 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Stk38Q91VJ4 465 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Gm21969J3QJZ1 289 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 Spag5Q7TME2 1165 aa22.35■■□□□ 1.17
Upf1-201ENSMUST00000075666 A0A1L1SQF0 893 aa22.34■■□□□ 1.17
Upf1-201ENSMUST00000075666 TmpoQ61033 693 aaKnown RBP22.34■■□□□ 1.17
Upf1-201ENSMUST00000075666 Stx6Q9JKK1 255 aa22.34■■□□□ 1.17
Upf1-201ENSMUST00000075666 NefhP19246 1090 aa22.34■■□□□ 1.17
Upf1-201ENSMUST00000075666 Znf771Q8BJ90 317 aa22.34■■□□□ 1.17
Upf1-201ENSMUST00000075666 Smc4Q8CG47 1286 aa22.34■■□□□ 1.17
Upf1-201ENSMUST00000075666 Slu7Q8BHJ9 585 aa22.33■■□□□ 1.17
Upf1-201ENSMUST00000075666 HypkQ9CR41 129 aa22.33■■□□□ 1.17
Upf1-201ENSMUST00000075666 Sbno1Q689Z5 1390 aa22.33■■□□□ 1.17
Upf1-201ENSMUST00000075666 Pprc1Q6NZN1 1644 aa22.33■■□□□ 1.16
Upf1-201ENSMUST00000075666 Ppp1r15aP17564 657 aa22.32■■□□□ 1.16
Upf1-201ENSMUST00000075666 Kdm4cQ8VCD7 1054 aa22.32■■□□□ 1.16
Upf1-201ENSMUST00000075666 Ipo7Q9EPL8 1038 aaKnown RBP22.32■■□□□ 1.16
Upf1-201ENSMUST00000075666 Trappc8E9PWG2 1437 aa22.32■■□□□ 1.16
Upf1-201ENSMUST00000075666 Fam13aQ8BGI4 693 aa22.32■■□□□ 1.16
Upf1-201ENSMUST00000075666 Mrps27Q8BK72 415 aaKnown RBP22.32■■□□□ 1.16
Upf1-201ENSMUST00000075666 MyclP10166 368 aa22.32■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms