RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Anapc15-psA0A140T8L6 141 aa18.25■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Ppip5k2Q6ZQB6 1129 aa18.25■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Stk11ipQ3TAA7 1072 aa18.25■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Trim27Q62158 513 aa18.25■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Lrrc7Q80TE7 1490 aa18.25■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Nrxn1Q9CS84 1514 aa18.25■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 AU022751B1B0V2 589 aa18.24■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Ehbp1l1Q99MS7 1716 aa18.23■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Znf541Q0GGX2 1363 aa18.23■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Gm9992B2RWK3 458 aa18.23■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Vamp4O70480 141 aa18.23■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Unc93aQ710D3 458 aa18.23■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Znf518aB2RRF6 1478 aaKnown RBP18.22■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Cdc42bpgQ80UW5 1551 aa18.22■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Gzf1Q4VBD9 706 aa18.22■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Eif4g2Q62448 906 aaKnown RBP18.22■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Aldh8a1Q8BH00 487 aa18.22■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Pank2Q3U4S0 443 aa18.21■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Q4VA45 678 aa18.21■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Cdc37l1Q9CZP7 335 aa18.21■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Fchsd2Q3USJ8 740 aa18.2■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Zranb1Q7M760 708 aa18.2■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Pnma3Q8JZW8 466 aa18.2■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 PtmsQ9D0J8 101 aaKnown RBP18.2■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Ppp6r3Q922D4 844 aa18.2■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 HnrnpuQ8VEK3 800 aaKnown RBP18.19■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Lekr1B2RVN1 116 aa18.19■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 IbspQ61711 324 aa18.19■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Slc12a5Q91V14 1138 aa18.19■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Chrna2Q91X60 512 aa18.19■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Slc52a2Q9D8F3 450 aa18.19■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Gcc1Q9D4H2 778 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Cyp27a1Q9DBG1 533 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Lemd3Q9WU40 921 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 PalmQ9Z0P4 383 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Atp7bQ64446 1462 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Zdhhc9P59268 364 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Zfp91Q62511 572 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Rcan3Q9JKK0 239 aa18.18■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Syce3B5KM66 88 aa18.17■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Nucb1Q02819 459 aaKnown RBP18.17■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Prex1Q69ZK0 1650 aa18.17■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Pdia3P27773 505 aaKnown RBP18.17■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Ecm2Q5FW85 670 aa18.17■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Zscan25B2RX31 543 aa18.16■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Mcm2P97310 904 aa18.15■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Kdm4aQ8BW72 1064 aa18.15■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 FanclQ9CR14 375 aa18.15■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Elp1Q7TT37 1333 aaKnown RBP18.15■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Ift172Q6VH22 1749 aa18.15■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Rbm27Q5SFM8 1060 aaKnown RBP18.14■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Stk26Q99JT2 416 aa18.14■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Senp3Q9EP97 568 aaKnown RBP18.14■□□□□ 0.5
Ushbp1-201ENSMUST00000049184 Gnai1B2RSH2 354 aa18.14■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Mindy4Q3UQI9 744 aa18.14■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Gnai3Q9DC51 354 aa18.14■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Mdc1Q5PSV9 1707 aa18.14■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Gripap1Q8VD04 806 aa18.13■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Chd1P40201 1711 aa18.13■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Rnf214Q8BFU3 668 aaKnown RBP18.13■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Gdpd2Q9ESM6 539 aa18.13■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 NcapgE9PWG6 1004 aa18.12■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Kif4P33174 1231 aa18.12■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Glipr1l2Q9CQ35 332 aa18.11■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Cfap65Q3V0B4 1847 aa18.11■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Gadd45bP22339 160 aa18.11■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Usp32F8VPZ3 1604 aa18.11■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Ric3Q8BPM6 367 aa18.1■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 NinlQ6ZQ12 1394 aa18.1■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Tecpr2Q3UH45 1423 aa18.1■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Triml2E9PW10 424 aa18.1■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Gys2Q8VCB3 704 aa18.1■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Cavin2Q63918 418 aaKnown RBP18.09■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Rps6ka5Q8C050 863 aa18.09■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Rab11fip3Q8CHD8 1047 aa18.09■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Usp16Q99LG0 825 aa18.09■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Wdr78E9PYY5 807 aa18.09■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Mrps27Q8BK72 415 aaKnown RBP18.09■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Depdc5P61460 1591 aa18.08■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Topbp1Q6ZQF0 1515 aa18.08■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Igf1rQ60751 1373 aa18.08■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Gsto1O09131 240 aa18.08■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Trim28Q62318 834 aa18.08■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 MarsQ68FL6 902 aaKnown RBP18.08■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 E4f1Q8CCE9 783 aa18.08■□□□□ 0.49
Ushbp1-201ENSMUST00000049184 Anp32cQ64G17 123 aa18.08■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Fam13aQ8BGI4 693 aa18.08■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Aldh1l2Q8K009 923 aa18.08■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Smarca5Q91ZW3 1051 aaKnown RBP18.08■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Tnnt2P50752 301 aa18.07■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Dhx30Q99PU8 1217 aaKnown RBP18.07■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Zkscan16A2ALW2 728 aa18.06■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Tm6sf1P58749 370 aa18.06■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 U2surpQ6NV83 1029 aaKnown RBP18.06■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Erc2Q6PH08 957 aa18.06■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 NexnQ7TPW1 607 aa18.06■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Gm45015A0A140LII9 184 aa18.06■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Gm18336A0A140LIU8 765 aa18.06■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Chd1lQ9CXF7 900 aa18.05■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Q9D2X8 372 aa18.05■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms