RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Spty2d1Q68FG3 682 aa10.49□□□□□ -0.73
Ttc28-201ENSMUST00000040111 GptQ8QZR5 496 aa10.49□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Frmd3Q8BHD4 595 aa10.49□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Msl1Q6PDM1 616 aa10.49□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Rrp9Q91WM3 475 aaKnown RBP10.49□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Rapgef4Q9EQZ6 1011 aa10.49□□□□□ -0.73
Ttc28-201ENSMUST00000040111 March6Q6ZQ89 909 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Gcom1E9PZ54 550 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 MyzapQ3UIJ9 466 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Rab3gap2Q8BMG7 1366 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Erc2Q6PH08 957 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Rabep1O35551 862 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Larp6Q8BN59 492 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Zbtb22Q9Z0G7 638 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Plekhg5Q66T02 1073 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Paxip1Q6NZQ4 1056 aa10.48□□□□□ -0.73
Ttc28-201ENSMUST00000040111 TbcaP48428 108 aaKnown RBP10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 SkilQ60665 675 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Kcnn1Q9EQR3 537 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Tnni2P13412 182 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 GpkowQ56A08 488 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Chaf1aQ9QWF0 911 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Mroh2bQ7M6Y6 1581 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Pde4bB1AWC9 736 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Chpf2Q3UU43 768 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Mug1P28665 1476 aa10.47□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Dzip1Q8BMD2 852 aa10.46□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Zbtb45Q52KG4 520 aa10.46□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Tbc1d8Q9Z1A9 1134 aa10.46□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Ccdc173A0JLY1 547 aa10.46□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Rab11fip3Q8CHD8 1047 aa10.46□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Amotl2Q8K371 772 aa10.46□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Golim4Q8BXA1 655 aa10.46□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Stard3nlQ9DCI3 235 aa10.46□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Hmgn5Q9JL35 406 aa10.46□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Nsfl1cQ9CZ44 370 aaKnown RBP10.46□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Il1rapl2Q9ERS6 686 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Nup133Q8R0G9 1155 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Ppp2r3aB2RXC8 1150 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 A0A1L1SQF0 893 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Bcar3Q9QZK2 820 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Dctn1O08788 1281 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Fkbp5Q64378 456 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Mrps25Q9D125 171 aaKnown RBP10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Hand2Q61039 217 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Klc3Q91W40 508 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Gpatch3Q8BIY1 525 aa10.45□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Brf1Q8CFK2 676 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Tmx1Q8VBT0 278 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 GphnQ8BUV3 769 aaKnown RBP10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Abcc5Q9R1X5 1436 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Pcf11G3X9Z4 1553 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Plekhh1Q80TI1 1356 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Cplx2P84086 134 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Slc26a8Q8R0C3 999 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Ptpdc1Q6NZK8 747 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Slc5a1Q8C3K6 665 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 4930572O03RikQ8C5Y0 211 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Kif18aQ91WD7 886 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 TimelessQ9R1X4 1197 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Gm156Q58A37 223 aa10.44□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Znf692Q3U381 531 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Rnf20Q5DTM8 973 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Gimap5Q8BWF2 308 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Soga3Q6NZL0 945 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Eno4Q8C042 619 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Slc5a4bQ91ZP4 660 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Fsd1Q7TPM6 496 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Tceanc2Q8R2M0 207 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Srek1Q8BZX4 494 aaKnown RBP10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Prkrip1Q9CWV6 186 aaKnown RBP10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Ifit1bl2Q3U687 466 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Ppp1r42Q8R1Z4 357 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Txnrd1Q9JMH6 613 aa10.43□□□□□ -0.74
Ttc28-201ENSMUST00000040111 BicraF8VPZ9 1578 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Cfap69Q8BH53 942 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Farp2Q91VS8 1065 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Trim34bJ3QNR8 485 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Rbm33Q9CXK9 1231 aaKnown RBP10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Atp10dQ8K2X1 1416 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 NrkQ9R0G8 1455 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 TkfcQ8VC30 578 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Trim34aQ99PP6 485 aa10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Prpf4bQ61136 1007 aaKnown RBP10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 SrrtQ99MR6 875 aaKnown RBP10.42□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Cfap99A0A140LIX9 648 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Rai14Q9EP71 979 aaKnown RBP10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Ccdc178Q8CDV0 866 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Hap1O35668 628 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 EzrP26040 586 aaKnown RBP10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Flad1Q8R123 492 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 F2rP30558 430 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Zkscan2G3X952 960 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 HmmrQ00547 794 aaKnown RBP10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Pof1bQ8K4L4 587 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 NsmfQ99NF2 532 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Magi1Q6RHR9 1471 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Zap70P43404 618 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 Sycp1Q62209 993 aa10.41□□□□□ -0.74
Ttc28-201ENSMUST00000040111 2310002L09RikQ9D7L5 217 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 142.5 ms