RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Mbd3Q9Z2D8 285 aaKnown RBP12.98□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ppp1r15aP17564 657 aa12.98□□□□□ -0.33
Limch1-201ENSMUST00000038188 Kcnh8P59111 1102 aa12.98□□□□□ -0.33
Limch1-201ENSMUST00000038188 SfswapQ3USH5 945 aaKnown RBP12.98□□□□□ -0.33
Limch1-201ENSMUST00000038188 Slc14a2Q8R4T9 930 aa12.98□□□□□ -0.33
Limch1-201ENSMUST00000038188 Kiaa0319Q5SZV5 1081 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Gimap8Q75N62 688 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Terf1P70371 421 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 GptQ8QZR5 496 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Kiaa1211Q5PR69 1207 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Fhod3Q76LL6 1578 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Atp7aQ64430 1491 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Myo1bP46735 1107 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ralbp1Q62172 648 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Krt82Q99M74 516 aa12.97□□□□□ -0.33
Limch1-201ENSMUST00000038188 Cyp7a1Q64505 503 aa12.96□□□□□ -0.34
Limch1-201ENSMUST00000038188 CgnP59242 1191 aa12.95□□□□□ -0.34
Limch1-201ENSMUST00000038188 Pim2Q62070 370 aa12.95□□□□□ -0.34
Limch1-201ENSMUST00000038188 Spryd3E9Q9B3 442 aa12.95□□□□□ -0.34
Limch1-201ENSMUST00000038188 Ppfibp2O35711 882 aa12.95□□□□□ -0.34
Limch1-201ENSMUST00000038188 Rpgrip1lQ8CG73 1264 aa12.95□□□□□ -0.34
Limch1-201ENSMUST00000038188 Kifc2O08672 792 aa12.95□□□□□ -0.34
Limch1-201ENSMUST00000038188 Tpm3-rs7D3Z2H9 248 aa12.94□□□□□ -0.34
Limch1-201ENSMUST00000038188 Mical1Q8VDP3 1048 aa12.94□□□□□ -0.34
Limch1-201ENSMUST00000038188 Ssh2Q5SW75 1423 aa12.94□□□□□ -0.34
Limch1-201ENSMUST00000038188 CastP51125 788 aa12.94□□□□□ -0.34
Limch1-201ENSMUST00000038188 Nol8Q3UHX0 1147 aaKnown RBP12.94□□□□□ -0.34
Limch1-201ENSMUST00000038188 Gm21969J3QJZ1 289 aa12.93□□□□□ -0.34
Limch1-201ENSMUST00000038188 CrebrfQ8CDG5 640 aaKnown RBP12.93□□□□□ -0.34
Limch1-201ENSMUST00000038188 Plcb2A3KGF7 1181 aa12.93□□□□□ -0.34
Limch1-201ENSMUST00000038188 CrklP47941 303 aa12.93□□□□□ -0.34
Limch1-201ENSMUST00000038188 Bsdc1Q80Y55 427 aa12.93□□□□□ -0.34
Limch1-201ENSMUST00000038188 Zfyve16Q80U44 1528 aa12.93□□□□□ -0.34
Limch1-201ENSMUST00000038188 Ddx46Q569Z5 1032 aaKnown RBP12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 PaskQ8CEE6 1383 aa12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 Taok2Q6ZQ29 1240 aa12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 Mcm10Q0VBD2 885 aa12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 Rrs1Q9CYH6 365 aaKnown RBP12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 Sik1Q60670 779 aa12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 Hdac9Q99N13 588 aa12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 Tom1l2Q5SRX1 507 aa12.92□□□□□ -0.34
Limch1-201ENSMUST00000038188 Rab3gap2Q8BMG7 1366 aa12.91□□□□□ -0.34
Limch1-201ENSMUST00000038188 Erc2Q6PH08 957 aa12.91□□□□□ -0.34
Limch1-201ENSMUST00000038188 Miga2Q8BK03 593 aa12.91□□□□□ -0.34
Limch1-201ENSMUST00000038188 Cetn4Q8K4K1 168 aa12.91□□□□□ -0.34
Limch1-201ENSMUST00000038188 Hmox1P14901 289 aa12.91□□□□□ -0.34
Limch1-201ENSMUST00000038188 Mfap1aC0HKD8 439 aaKnown RBP12.91□□□□□ -0.34
Limch1-201ENSMUST00000038188 Mfap1bC0HKD9 439 aaKnown RBP12.91□□□□□ -0.34
Limch1-201ENSMUST00000038188 Tpd52l1O54818 204 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Myd88P22366 296 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Cdc37l1Q9CZP7 335 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Stk3Q9JI10 497 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Eif3aP23116 1344 aaKnown RBP12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Lrrc43Q3V0L5 667 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Polr3aB2RXC6 1390 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 NinlQ6ZQ12 1394 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Cgnl1Q6AW69 1298 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Adcy10Q8C0T9 1614 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Fbxo41Q6NS60 873 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Ccdc178Q8CDV0 866 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Plekhg2Q6KAU7 1340 aa12.9□□□□□ -0.34
Limch1-201ENSMUST00000038188 Rai14Q9EP71 979 aaKnown RBP12.89□□□□□ -0.35
Limch1-201ENSMUST00000038188 NsmfQ99NF2 532 aa12.89□□□□□ -0.35
Limch1-201ENSMUST00000038188 Q7TT23 1179 aa12.89□□□□□ -0.35
Limch1-201ENSMUST00000038188 Idi1P58044 227 aa12.89□□□□□ -0.35
Limch1-201ENSMUST00000038188 B4galnt4Q766D5 1034 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Tut1Q8R3F9 869 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Klhdc4Q921I2 584 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 PhaxQ9JJT9 385 aaKnown RBP12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Ak9G3UYQ4 1894 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Col17a1Q07563 1470 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Eif6O55135 245 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Dusp27Q148W8 1138 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 ThemisQ8BGW0 636 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Spg7Q3ULF4 781 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Ccdc30Q8BVF4 654 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Polr3dQ91WD1 398 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Cplx2P84086 134 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Casc1Q6TDU8 730 aa12.88□□□□□ -0.35
Limch1-201ENSMUST00000038188 Igflr1Q3U4N7 345 aa12.87□□□□□ -0.35
Limch1-201ENSMUST00000038188 Lmod3E9QA62 571 aa12.87□□□□□ -0.35
Limch1-201ENSMUST00000038188 Atp2b4Q6Q477 1205 aa12.87□□□□□ -0.35
Limch1-201ENSMUST00000038188 Rfx7F8VPJ6 1459 aa12.87□□□□□ -0.35
Limch1-201ENSMUST00000038188 Slc4a3P16283 1227 aa12.87□□□□□ -0.35
Limch1-201ENSMUST00000038188 Kiaa0753Q6A000 959 aa12.87□□□□□ -0.35
Limch1-201ENSMUST00000038188 Dydc2Q9D3X8 139 aa12.87□□□□□ -0.35
Limch1-201ENSMUST00000038188 Map3k4O08648 1597 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Soga3Q6NZL0 945 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Bms1Q6PGF5 1284 aaKnown RBP12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Slc12a5Q91V14 1138 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Stk32bQ9JJX8 414 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Wdr17E9Q271 1322 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Odf2A3KGV1 830 aaKnown RBP12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Chmp5Q9D7S9 219 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Dpp7Q9ET22 506 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Gsdma2Q32M21 443 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Me1P06801 572 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 Skap1Q3UUV5 355 aa12.86□□□□□ -0.35
Limch1-201ENSMUST00000038188 R3hcc1Q8BSI6 488 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 GpkowQ56A08 488 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms