RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 FancaQ9JL70 1439 aa29.54■■■□□ 2.32
Cln6-201ENSMUST00000034776 Gnai1B2RSH2 354 aa29.54■■■□□ 2.32
Cln6-201ENSMUST00000034776 Rad17Q6NXW6 688 aa29.54■■■□□ 2.32
Cln6-201ENSMUST00000034776 Cdc37l1Q9CZP7 335 aa29.54■■■□□ 2.32
Cln6-201ENSMUST00000034776 Gnai3Q9DC51 354 aa29.54■■■□□ 2.32
Cln6-201ENSMUST00000034776 Egfem1Q8C088 590 aa29.53■■■□□ 2.32
Cln6-201ENSMUST00000034776 Cabp4Q8VHC5 271 aa29.53■■■□□ 2.32
Cln6-201ENSMUST00000034776 Tmem2Q5FWI3 1383 aa29.53■■■□□ 2.32
Cln6-201ENSMUST00000034776 Parp14Q2EMV9 1817 aa29.53■■■□□ 2.32
Cln6-201ENSMUST00000034776 Gm21190A0A0G2JGJ6 266 aa29.53■■■□□ 2.32
Cln6-201ENSMUST00000034776 Zfp777B9EKF4 885 aa29.53■■■□□ 2.32
Cln6-201ENSMUST00000034776 Ccdc60Q8C4J0 545 aa29.53■■■□□ 2.32
Cln6-201ENSMUST00000034776 Phlpp1Q8CHE4 1687 aa29.52■■■□□ 2.32
Cln6-201ENSMUST00000034776 Duxf3A0A0N4SV92 674 aa29.52■■■□□ 2.32
Cln6-201ENSMUST00000034776 Slc35g1Q8BY79 368 aa29.52■■■□□ 2.32
Cln6-201ENSMUST00000034776 Nckap5lQ6GQX2 1323 aa29.51■■■□□ 2.32
Cln6-201ENSMUST00000034776 PtprvP70289 1705 aa29.5■■■□□ 2.31
Cln6-201ENSMUST00000034776 G3bp1P97855 465 aaKnown RBP29.48■■■□□ 2.31
Cln6-201ENSMUST00000034776 Ano8Q6PB70 1060 aa29.48■■■□□ 2.31
Cln6-201ENSMUST00000034776 Slit2Q9R1B9 1521 aa29.48■■■□□ 2.31
Cln6-201ENSMUST00000034776 Vamp4O70480 141 aa29.48■■■□□ 2.31
Cln6-201ENSMUST00000034776 EspnQ9ET47 871 aa29.48■■■□□ 2.31
Cln6-201ENSMUST00000034776 Plin1Q8CGN5 517 aa29.47■■■□□ 2.31
Cln6-201ENSMUST00000034776 Chmp5Q9D7S9 219 aa29.47■■■□□ 2.31
Cln6-201ENSMUST00000034776 Ppp1r3fQ9JIG4 799 aa29.47■■■□□ 2.31
Cln6-201ENSMUST00000034776 B4galnt3Q6L8S8 986 aa29.43■■■□□ 2.3
Cln6-201ENSMUST00000034776 Eya1P97767 591 aa29.42■■■□□ 2.3
Cln6-201ENSMUST00000034776 Rlbp1Q9Z275 317 aa29.42■■■□□ 2.3
Cln6-201ENSMUST00000034776 Ptpn23Q6PB44 1692 aa29.42■■■□□ 2.3
Cln6-201ENSMUST00000034776 Sos1Q62245 1319 aa29.42■■■□□ 2.3
Cln6-201ENSMUST00000034776 Ncapd2Q8K2Z4 1392 aa29.41■■■□□ 2.3
Cln6-201ENSMUST00000034776 Hoxc9P09633 260 aa29.41■■■□□ 2.3
Cln6-201ENSMUST00000034776 Ncoa4Q5U4H9 625 aa29.41■■■□□ 2.3
Cln6-201ENSMUST00000034776 Plekhm2Q80TQ5 1018 aa29.41■■■□□ 2.3
Cln6-201ENSMUST00000034776 TmpoQ61033 693 aaKnown RBP29.41■■■□□ 2.3
Cln6-201ENSMUST00000034776 Gm6268A2A3U9 297 aa29.39■■■□□ 2.3
Cln6-201ENSMUST00000034776 Dbr1Q923B1 550 aa29.39■■■□□ 2.3
Cln6-201ENSMUST00000034776 Usp16Q99LG0 825 aa29.39■■■□□ 2.3
Cln6-201ENSMUST00000034776 Ccne1Q61457 408 aa29.38■■■□□ 2.29
Cln6-201ENSMUST00000034776 Slain2Q8CI08 581 aa29.38■■■□□ 2.29
Cln6-201ENSMUST00000034776 Maco1Q7TQE6 664 aaKnown RBP29.36■■■□□ 2.29
Cln6-201ENSMUST00000034776 Gimap6Q8K349 305 aa29.36■■■□□ 2.29
Cln6-201ENSMUST00000034776 KarsQ99MN1 595 aaKnown RBP29.35■■■□□ 2.29
Cln6-201ENSMUST00000034776 Tet3Q8BG87 1668 aa29.35■■■□□ 2.29
Cln6-201ENSMUST00000034776 Wdr17E9Q271 1322 aa29.35■■■□□ 2.29
Cln6-201ENSMUST00000034776 Nsd3Q6P2L6 1439 aa29.34■■■□□ 2.29
Cln6-201ENSMUST00000034776 Cavin2Q63918 418 aaKnown RBP29.34■■■□□ 2.29
Cln6-201ENSMUST00000034776 Trpm3Q5F4S9 1721 aa29.34■■■□□ 2.29
Cln6-201ENSMUST00000034776 Fyb1O35601 819 aa29.33■■■□□ 2.29
Cln6-201ENSMUST00000034776 TimelessQ9R1X4 1197 aa29.33■■■□□ 2.29
Cln6-201ENSMUST00000034776 Klhdc4Q921I2 584 aa29.33■■■□□ 2.29
Cln6-201ENSMUST00000034776 Robo1O89026 1612 aa29.32■■■□□ 2.28
Cln6-201ENSMUST00000034776 Aldh1l1Q8R0Y6 902 aa29.32■■■□□ 2.28
Cln6-201ENSMUST00000034776 Nfat5Q9WV30 1534 aa29.32■■■□□ 2.28
Cln6-201ENSMUST00000034776 Q3UPC7 1272 aa29.32■■■□□ 2.28
Cln6-201ENSMUST00000034776 U2surpQ6NV83 1029 aaKnown RBP29.31■■■□□ 2.28
Cln6-201ENSMUST00000034776 Tmco5bQ80X59 307 aa29.3■■■□□ 2.28
Cln6-201ENSMUST00000034776 Col18a1P39061 1774 aa29.3■■■□□ 2.28
Cln6-201ENSMUST00000034776 Nectin2P32507 530 aa29.3■■■□□ 2.28
Cln6-201ENSMUST00000034776 Tmem132eQ6IEE6 982 aa29.3■■■□□ 2.28
Cln6-201ENSMUST00000034776 Rab11fip3Q8CHD8 1047 aa29.3■■■□□ 2.28
Cln6-201ENSMUST00000034776 Znf330Q922H9 316 aa29.29■■■□□ 2.28
Cln6-201ENSMUST00000034776 Senp3Q9EP97 568 aaKnown RBP29.29■■■□□ 2.28
Cln6-201ENSMUST00000034776 Rtl5Q5DTT4 599 aa29.28■■■□□ 2.28
Cln6-201ENSMUST00000034776 Wnk3Q80XP9 1757 aa29.28■■■□□ 2.28
Cln6-201ENSMUST00000034776 Rangap1P46061 589 aaKnown RBP29.27■■■□□ 2.28
Cln6-201ENSMUST00000034776 Adgrb1Q3UHD1 1582 aa29.26■■■□□ 2.27
Cln6-201ENSMUST00000034776 MarsQ68FL6 902 aaKnown RBP29.26■■■□□ 2.27
Cln6-201ENSMUST00000034776 Kcnh5Q920E3 988 aa29.26■■■□□ 2.27
Cln6-201ENSMUST00000034776 Kcna6Q61923 529 aa29.24■■■□□ 2.27
Cln6-201ENSMUST00000034776 Rtf1A2AQ19 715 aaKnown RBP29.24■■■□□ 2.27
Cln6-201ENSMUST00000034776 Evi5lH3BKQ3 813 aa29.23■■■□□ 2.27
Cln6-201ENSMUST00000034776 HypkQ9CR41 129 aa29.23■■■□□ 2.27
Cln6-201ENSMUST00000034776 TatQ8QZR1 454 aa29.23■■■□□ 2.27
Cln6-201ENSMUST00000034776 Atl3Q91YH5 541 aa29.23■■■□□ 2.27
Cln6-201ENSMUST00000034776 Arfgef2A2A5R2 1792 aa29.22■■■□□ 2.27
Cln6-201ENSMUST00000034776 Hs1bp3Q3TC93 395 aa29.22■■■□□ 2.27
Cln6-201ENSMUST00000034776 Nutm1Q8BHP2 1126 aa29.22■■■□□ 2.27
Cln6-201ENSMUST00000034776 Rapgef3Q8VCC8 918 aa29.22■■■□□ 2.27
Cln6-201ENSMUST00000034776 Ipo9Q91YE6 1041 aa29.21■■■□□ 2.27
Cln6-201ENSMUST00000034776 Ahnak2E9PYB0 1738 aaKnown RBP29.21■■■□□ 2.27
Cln6-201ENSMUST00000034776 Siglec1Q62230 1695 aa29.21■■■□□ 2.27
Cln6-201ENSMUST00000034776 Ggnbp2Q5SV77 696 aa29.2■■■□□ 2.26
Cln6-201ENSMUST00000034776 Farp2Q91VS8 1065 aa29.2■■■□□ 2.26
Cln6-201ENSMUST00000034776 MvpQ9EQK5 861 aa29.2■■■□□ 2.26
Cln6-201ENSMUST00000034776 Snap23O09044 210 aa29.19■■■□□ 2.26
Cln6-201ENSMUST00000034776 Chl1P70232 1209 aa29.19■■■□□ 2.26
Cln6-201ENSMUST00000034776 Prim1P20664 417 aa29.18■■■□□ 2.26
Cln6-201ENSMUST00000034776 Ankrd44B2RXR6 993 aa29.18■■■□□ 2.26
Cln6-201ENSMUST00000034776 Gsdma3Q5Y4Y6 464 aa29.18■■■□□ 2.26
Cln6-201ENSMUST00000034776 Armcx1Q9CX83 456 aa29.17■■■□□ 2.26
Cln6-201ENSMUST00000034776 Larp1bA0A0A6YXJ7 370 aaKnown RBP29.17■■■□□ 2.26
Cln6-201ENSMUST00000034776 Dnajc10Q9DC23 793 aa29.17■■■□□ 2.26
Cln6-201ENSMUST00000034776 Scn4aQ9ER60 1841 aa29.16■■■□□ 2.26
Cln6-201ENSMUST00000034776 Fmnl2A2APV2 1086 aa29.16■■■□□ 2.26
Cln6-201ENSMUST00000034776 Kdm6aO70546 1401 aa29.16■■■□□ 2.26
Cln6-201ENSMUST00000034776 Chmp4bQ9D8B3 224 aaKnown RBP29.14■■■□□ 2.25
Cln6-201ENSMUST00000034776 Igsf1Q7TQA1 1317 aa29.13■■■□□ 2.25
Cln6-201ENSMUST00000034776 AU019823E9PUQ3 292 aa29.12■■■□□ 2.25
Cln6-201ENSMUST00000034776 Cluap1Q8R3P7 413 aa29.12■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms