RNA–Protein interactions for RNA: ENSMUST00000025204.5

Pfdn1-201, Transcript of Prefoldin subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pfdn1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1-201ENSMUST00000025204 Plekhd1B2RPU2 505 aa17.63■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 Vps33bP59016 617 aa17.63■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 CrklP47941 303 aa17.62■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 OptnQ8K3K8 584 aa17.62■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 Tmem132eQ6IEE6 982 aa17.61■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 TkfcQ8VC30 578 aa17.61■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 Cald1E9QA15 768 aaKnown RBP17.6■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 Mst1rQ62190 1378 aa17.6■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 Akap11E9Q777 1895 aa17.59■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 Mast2Q60592 1734 aa17.59■□□□□ 0.41
Pfdn1-201ENSMUST00000025204 Trim28Q62318 834 aa17.58■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Ly75Q60767 1723 aa17.58■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Nwd2Q6P5U7 1742 aa17.58■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Uhrf1bp1lA2RSJ4 1457 aa17.57■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Ginm1Q91WR6 327 aa17.57■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Aebp2Q9Z248 504 aaKnown RBP17.57■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 MpndQ3TV65 487 aa17.56■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Col15a1O35206 1367 aa17.55■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Rgs17Q9QZB0 210 aa17.55■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Kdm6aO70546 1401 aa17.55■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 PnisrA2AJT4 805 aaKnown RBP17.54■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Pak3Q61036 559 aa17.54■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Ccne1Q61457 408 aa17.54■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Zpr1Q62384 459 aa17.54■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Zfp777B9EKF4 885 aa17.53■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 4930523C07RikE9Q2T4 99 aa17.53■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Ppp1r15aP17564 657 aa17.53■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Ppp6r1Q7TSI3 856 aa17.53■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Ankrd23Q812A3 306 aa17.53■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Taok3Q8BYC6 898 aa17.53■□□□□ 0.4
Pfdn1-201ENSMUST00000025204 Simc1E9Q6E9 1354 aa17.52■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Adgrb1Q3UHD1 1582 aa17.51■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Kcnh4A2A5F7 1018 aa17.5■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Parp14Q2EMV9 1817 aa17.49■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Ccdc6D3YZP9 469 aa17.49■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Eif4a2P10630 407 aa17.49■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Zranb3Q6NZP1 1069 aa17.49■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Rab3gap2Q8BMG7 1366 aa17.49■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Kiaa0319Q5SZV5 1081 aa17.48■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Rsph6aQ8CDR2 708 aa17.48■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Ddb1Q3U1J4 1140 aaKnown RBP17.47■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Sik1Q60670 779 aa17.47■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Cc2d1aQ8K1A6 943 aa17.47■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Eya1P97767 591 aa17.46■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Ppp2r1aQ76MZ3 589 aa17.46■□□□□ 0.39
Pfdn1-201ENSMUST00000025204 Gm10471E9Q1C7 252 aa17.45■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Ppp1r37Q8BKR5 712 aa17.45■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Cypt1Q8CH20 168 aa17.45■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Wdr66E9Q743 1299 aa17.44■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Exoc5Q3TPX4 708 aa17.44■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Sugp2Q8CH09 1067 aa17.44■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Zcrb1Q9CZ96 217 aaKnown RBP17.43■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Arfgef2A2A5R2 1792 aa17.43■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Adamtsl1Q8BLI0 1745 aa17.42■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Elp1Q7TT37 1333 aaKnown RBP17.42■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 ThemisQ8BGW0 636 aa17.41■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 4930572O03RikQ8C5Y0 211 aa17.41■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Slc12a5Q91V14 1138 aa17.41■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Anp32bQ9EST5 272 aaKnown RBP17.41■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 P2rx7Q9Z1M0 595 aa17.41■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Ahnak2E9PYB0 1738 aaKnown RBP17.4■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 Nsd3Q6P2L6 1439 aa17.39■□□□□ 0.38
Pfdn1-201ENSMUST00000025204 GakQ99KY4 1305 aa17.39■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Gsdma3Q5Y4Y6 464 aa17.37■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Fam50bQ9WTJ8 334 aa17.37■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Spef2Q8C9J3 1734 aa17.37■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Aplp2Q06335 707 aa17.36■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Lrit1Q8K099 624 aa17.36■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 MpripP97434 1024 aa17.35■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Nlrp6Q91WS2 869 aa17.35■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Tns2Q8CGB6 1400 aa17.35■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Gm21680A0A0G2JGR8 267 aa17.34■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Ppfibp2O35711 882 aa17.34■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 GalcP54818 684 aa17.34■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Apba2P98084 750 aa17.34■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 Rab11fip3Q8CHD8 1047 aa17.34■□□□□ 0.37
Pfdn1-201ENSMUST00000025204 HypkQ9CR41 129 aa17.33■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Speer4bQ9D9F7 267 aa17.33■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 GsdmaQ9EST1 446 aa17.33■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Tsen2Q6P7W5 460 aa17.32■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Afg3l2Q8JZQ2 802 aaKnown RBP17.32■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 PappaQ8R4K8 1624 aa17.32■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Vars2Q3U2A8 1060 aa17.31■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Eif3bQ8JZQ9 803 aaKnown RBP17.31■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Amotl1Q9D4H4 968 aa17.31■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 PalmQ9Z0P4 383 aa17.31■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Atf7ipQ7TT18 1306 aa17.3■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 OscarQ8VBT3 265 aa17.3■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Pnpla7A2AJ88 1352 aa17.29■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Arhgap33Q80YF9 1305 aa17.29■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Ubap1lG3UW59 384 aa17.29■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Hmgb2P30681 210 aaKnown RBP17.29■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 TnikP83510 1323 aa17.28■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Sos2Q02384 1333 aa17.28■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Fchsd2Q3USJ8 740 aa17.28■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Ssfa2Q922B9 1252 aa17.28■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Kiaa1107Q80TK0 1369 aa17.28■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 U2af1Q9D883 239 aaKnown RBP17.27■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Rps6ka4Q9Z2B9 773 aa17.27■□□□□ 0.36
Pfdn1-201ENSMUST00000025204 Phkg2Q9DB30 406 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms