RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 RgmbQ7TQ33 436 aa21.78■■□□□ 1.08
Ubb-201ENSMUST00000019649 Dcaf11Q91VU6 549 aa21.78■■□□□ 1.08
Ubb-201ENSMUST00000019649 Slit1Q80TR4 1531 aa21.78■■□□□ 1.08
Ubb-201ENSMUST00000019649 Birc3O08863 600 aa21.77■■□□□ 1.07
Ubb-201ENSMUST00000019649 Sall2Q9QX96 1004 aa21.77■■□□□ 1.07
Ubb-201ENSMUST00000019649 Zscan10Q3URR7 782 aa21.76■■□□□ 1.07
Ubb-201ENSMUST00000019649 Tmem132eQ6IEE6 982 aa21.75■■□□□ 1.07
Ubb-201ENSMUST00000019649 Ptpn23Q6PB44 1692 aa21.75■■□□□ 1.07
Ubb-201ENSMUST00000019649 Hoxc9P09633 260 aa21.74■■□□□ 1.07
Ubb-201ENSMUST00000019649 CrklP47941 303 aa21.74■■□□□ 1.07
Ubb-201ENSMUST00000019649 Rad17Q6NXW6 688 aa21.74■■□□□ 1.07
Ubb-201ENSMUST00000019649 Nwd2Q6P5U7 1742 aa21.74■■□□□ 1.07
Ubb-201ENSMUST00000019649 OptnQ8K3K8 584 aa21.73■■□□□ 1.07
Ubb-201ENSMUST00000019649 Uhrf1bp1lA2RSJ4 1457 aa21.71■■□□□ 1.07
Ubb-201ENSMUST00000019649 Plekhd1B2RPU2 505 aa21.7■■□□□ 1.06
Ubb-201ENSMUST00000019649 Taok3Q8BYC6 898 aa21.69■■□□□ 1.06
Ubb-201ENSMUST00000019649 Ccdc6D3YZP9 469 aa21.68■■□□□ 1.06
Ubb-201ENSMUST00000019649 Vps33bP59016 617 aa21.68■■□□□ 1.06
Ubb-201ENSMUST00000019649 Sugp2Q8CH09 1067 aa21.68■■□□□ 1.06
Ubb-201ENSMUST00000019649 Mst1rQ62190 1378 aa21.67■■□□□ 1.06
Ubb-201ENSMUST00000019649 Kiaa0319Q5SZV5 1081 aa21.67■■□□□ 1.06
Ubb-201ENSMUST00000019649 Pak3Q61036 559 aa21.67■■□□□ 1.06
Ubb-201ENSMUST00000019649 TkfcQ8VC30 578 aa21.65■■□□□ 1.06
Ubb-201ENSMUST00000019649 Adamtsl1Q8BLI0 1745 aa21.65■■□□□ 1.06
Ubb-201ENSMUST00000019649 Zpr1Q62384 459 aa21.64■■□□□ 1.06
Ubb-201ENSMUST00000019649 Ppp6r1Q7TSI3 856 aa21.64■■□□□ 1.06
Ubb-201ENSMUST00000019649 4930523C07RikE9Q2T4 99 aa21.64■■□□□ 1.05
Ubb-201ENSMUST00000019649 Ankrd23Q812A3 306 aa21.64■■□□□ 1.05
Ubb-201ENSMUST00000019649 Col15a1O35206 1367 aa21.63■■□□□ 1.05
Ubb-201ENSMUST00000019649 Parp14Q2EMV9 1817 aa21.63■■□□□ 1.05
Ubb-201ENSMUST00000019649 Ccne1Q61457 408 aa21.63■■□□□ 1.05
Ubb-201ENSMUST00000019649 Ginm1Q91WR6 327 aa21.63■■□□□ 1.05
Ubb-201ENSMUST00000019649 Adgrb1Q3UHD1 1582 aa21.6■■□□□ 1.05
Ubb-201ENSMUST00000019649 Zranb3Q6NZP1 1069 aa21.59■■□□□ 1.05
Ubb-201ENSMUST00000019649 Kdm6aO70546 1401 aa21.58■■□□□ 1.04
Ubb-201ENSMUST00000019649 Ddb1Q3U1J4 1140 aaKnown RBP21.58■■□□□ 1.04
Ubb-201ENSMUST00000019649 Cald1E9QA15 768 aaKnown RBP21.57■■□□□ 1.04
Ubb-201ENSMUST00000019649 Ubap1lG3UW59 384 aa21.56■■□□□ 1.04
Ubb-201ENSMUST00000019649 Sik1Q60670 779 aa21.56■■□□□ 1.04
Ubb-201ENSMUST00000019649 Trim28Q62318 834 aa21.56■■□□□ 1.04
Ubb-201ENSMUST00000019649 Simc1E9Q6E9 1354 aa21.55■■□□□ 1.04
Ubb-201ENSMUST00000019649 Arfgef2A2A5R2 1792 aa21.55■■□□□ 1.04
Ubb-201ENSMUST00000019649 Kcnh4A2A5F7 1018 aa21.55■■□□□ 1.04
Ubb-201ENSMUST00000019649 Cc2d1aQ8K1A6 943 aa21.55■■□□□ 1.04
Ubb-201ENSMUST00000019649 Ahnak2E9PYB0 1738 aaKnown RBP21.54■■□□□ 1.04
Ubb-201ENSMUST00000019649 Gm10471E9Q1C7 252 aa21.54■■□□□ 1.04
Ubb-201ENSMUST00000019649 GakQ99KY4 1305 aa21.54■■□□□ 1.04
Ubb-201ENSMUST00000019649 Eif4a2P10630 407 aa21.52■■□□□ 1.04
Ubb-201ENSMUST00000019649 Exoc5Q3TPX4 708 aa21.52■■□□□ 1.04
Ubb-201ENSMUST00000019649 Ppp1r15aP17564 657 aa21.52■■□□□ 1.03
Ubb-201ENSMUST00000019649 Zcrb1Q9CZ96 217 aaKnown RBP21.52■■□□□ 1.03
Ubb-201ENSMUST00000019649 PnisrA2AJT4 805 aaKnown RBP21.51■■□□□ 1.03
Ubb-201ENSMUST00000019649 Eya1P97767 591 aa21.48■■□□□ 1.03
Ubb-201ENSMUST00000019649 Ppp1r37Q8BKR5 712 aa21.48■■□□□ 1.03
Ubb-201ENSMUST00000019649 Rsph6aQ8CDR2 708 aa21.47■■□□□ 1.03
Ubb-201ENSMUST00000019649 Lrit1Q8K099 624 aa21.47■■□□□ 1.03
Ubb-201ENSMUST00000019649 Elp1Q7TT37 1333 aaKnown RBP21.46■■□□□ 1.03
Ubb-201ENSMUST00000019649 Fam50bQ9WTJ8 334 aa21.45■■□□□ 1.03
Ubb-201ENSMUST00000019649 Ppfibp2O35711 882 aa21.45■■□□□ 1.02
Ubb-201ENSMUST00000019649 Nsd3Q6P2L6 1439 aa21.44■■□□□ 1.02
Ubb-201ENSMUST00000019649 GalcP54818 684 aa21.44■■□□□ 1.02
Ubb-201ENSMUST00000019649 Aplp2Q06335 707 aa21.44■■□□□ 1.02
Ubb-201ENSMUST00000019649 Kdm2bQ6P1G2 1309 aa21.44■■□□□ 1.02
Ubb-201ENSMUST00000019649 Rab3gap2Q8BMG7 1366 aa21.43■■□□□ 1.02
Ubb-201ENSMUST00000019649 Apba2P98084 750 aa21.43■■□□□ 1.02
Ubb-201ENSMUST00000019649 ThemisQ8BGW0 636 aa21.43■■□□□ 1.02
Ubb-201ENSMUST00000019649 4930572O03RikQ8C5Y0 211 aa21.43■■□□□ 1.02
Ubb-201ENSMUST00000019649 OscarQ8VBT3 265 aa21.43■■□□□ 1.02
Ubb-201ENSMUST00000019649 VirmaA2AIV2 1811 aaKnown RBP21.43■■□□□ 1.02
Ubb-201ENSMUST00000019649 Ildr2B5TVM2 661 aa21.41■■□□□ 1.02
Ubb-201ENSMUST00000019649 Zfp777B9EKF4 885 aa21.41■■□□□ 1.02
Ubb-201ENSMUST00000019649 Ppp2r1aQ76MZ3 589 aa21.41■■□□□ 1.02
Ubb-201ENSMUST00000019649 PappaQ8R4K8 1624 aa21.4■■□□□ 1.02
Ubb-201ENSMUST00000019649 Gm21680A0A0G2JGR8 267 aa21.4■■□□□ 1.02
Ubb-201ENSMUST00000019649 Slc12a5Q91V14 1138 aa21.4■■□□□ 1.02
Ubb-201ENSMUST00000019649 P2rx7Q9Z1M0 595 aa21.4■■□□□ 1.02
Ubb-201ENSMUST00000019649 Vars2Q3U2A8 1060 aa21.39■■□□□ 1.02
Ubb-201ENSMUST00000019649 Mapk8ip2Q9ERE9 830 aa21.39■■□□□ 1.02
Ubb-201ENSMUST00000019649 Pnpla7A2AJ88 1352 aa21.39■■□□□ 1.02
Ubb-201ENSMUST00000019649 MpripP97434 1024 aa21.39■■□□□ 1.01
Ubb-201ENSMUST00000019649 Speer4bQ9D9F7 267 aa21.39■■□□□ 1.01
Ubb-201ENSMUST00000019649 Spef2Q8C9J3 1734 aa21.38■■□□□ 1.01
Ubb-201ENSMUST00000019649 Abca3Q8R420 1704 aa21.38■■□□□ 1.01
Ubb-201ENSMUST00000019649 Arhgap33Q80YF9 1305 aa21.37■■□□□ 1.01
Ubb-201ENSMUST00000019649 Bsdc1Q80Y55 427 aa21.37■■□□□ 1.01
Ubb-201ENSMUST00000019649 Afg3l2Q8JZQ2 802 aaKnown RBP21.37■■□□□ 1.01
Ubb-201ENSMUST00000019649 Tns2Q8CGB6 1400 aa21.36■■□□□ 1.01
Ubb-201ENSMUST00000019649 Erbb3Q61526 1339 aa21.34■■□□□ 1.01
Ubb-201ENSMUST00000019649 Gsdma3Q5Y4Y6 464 aa21.33■■□□□ 1.01
Ubb-201ENSMUST00000019649 Snapc4Q8BP86 1333 aa21.33■■□□□ 1
Ubb-201ENSMUST00000019649 Shank3Q4ACU6 1730 aa21.32■■□□□ 1
Ubb-201ENSMUST00000019649 Sos2Q02384 1333 aa21.31■■□□□ 1
Ubb-201ENSMUST00000019649 Nlrp6Q91WS2 869 aa21.31■■□□□ 1
Ubb-201ENSMUST00000019649 Larp1Q6ZQ58 1072 aaKnown RBP21.3■■□□□ 1
Ubb-201ENSMUST00000019649 Eif3bQ8JZQ9 803 aaKnown RBP21.3■■□□□ 1
Ubb-201ENSMUST00000019649 PalmQ9Z0P4 383 aa21.3■■□□□ 1
Ubb-201ENSMUST00000019649 HypkQ9CR41 129 aa21.28■■□□□ 1
Ubb-201ENSMUST00000019649 Rps6ka4Q9Z2B9 773 aa21.28■■□□□ 1
Ubb-201ENSMUST00000019649 Pim2Q62070 370 aa21.26■□□□□ 0.99
Ubb-201ENSMUST00000019649 Tsen2Q6P7W5 460 aa21.26■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms