RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MYOCQ99972 504 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 DESI2Q9BSY9 194 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 ATP13A3Q9H7F0 1226 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 DNAAF2Q9NVR5 837 aaKnown RBP13.05□□□□□ -0.32
COL5A1-206ENST00000465877 DKK3Q9UBP4 350 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 ANKRD6Q9Y2G4 727 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 BTNL10A8MVZ5 291 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 TM4SF5O14894 197 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 WNT9AO14904 365 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 VILLO15195 856 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 PJA2O43164 708 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 WNT1P04628 370 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 CD38P28907 300 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 MMP13P45452 471 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 RENBPP51606 427 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 C21orf59P57076 290 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 GSDMDP57764 484 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 AP1S1P61966 158 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
COL5A1-206ENST00000465877 KIF19Q2TAC6 998 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 SLC9A4Q6AI14 798 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 TIGD7Q6NT04 549 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-206ENST00000465877 DAAM2Q86T65 1068 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 KIAA1328Q86T90 577 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 ZSCAN30Q86W11 494 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 BBS5Q8N3I7 341 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 PGBD5Q8N414 524 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 TMEM145Q8NBT3 493 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 NSMCE1Q8WV22 266 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 KLK6Q92876 244 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 HDAC11Q96DB2 347 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-206ENST00000465877 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 SUV39H2Q9H5I1 410 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 GAREM1Q9H706 876 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 FNDC3AQ9Y2H6 1198 aaKnown RBP13.04□□□□□ -0.32
COL5A1-206ENST00000465877 SNX11Q9Y5W9 270 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 ALG6Q9Y672 507 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 WDFY3Q8IZQ1 3526 aa13.04□□□□□ -0.32
COL5A1-206ENST00000465877 SPTBN2O15020 2390 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 SCN8AQ9UQD0 1980 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 A0A1W2PR77 199 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 UPK3BL1B0FP48 263 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 UPK3BL2E5RIL1 263 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 PRAMEF26H0Y7S4 382 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 NEMP1O14524 444 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 APOL1O14791 398 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 AREL1O15033 823 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 TSPAN6O43657 245 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 CR2P20023 1033 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 KCNA4P22459 653 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 HNRNPA2B1P22626 353 aaKnown RBP13.03□□□□□ -0.32
COL5A1-206ENST00000465877 CTSKP43235 329 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 SCNN1BP51168 640 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 MAXP61244 160 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 RPS21P63220 83 aaKnown RBP13.03□□□□□ -0.32
COL5A1-206ENST00000465877 BCL2L1Q07817 233 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL5A1-206ENST00000465877 HLA-BQ31612 363 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 SLC45A4Q5BKX6 768 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 MARC1Q5VT66 337 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 BRAT1Q6PJG6 821 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 MFSD7Q6UXD7 560 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 ERMP1Q7Z2K6 904 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 ZSWIM9Q86XI8 627 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 RFX6Q8HWS3 928 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 CAMK1DQ8IU85 385 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 MAML1Q92585 1016 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-206ENST00000465877 ECHDC3Q96DC8 303 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 CALR3Q96L12 384 aaKnown RBP13.03□□□□□ -0.32
COL5A1-206ENST00000465877 ZNF641Q96N77 438 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-206ENST00000465877 IL21RQ9HBE5 538 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 CA5BQ9Y2D0 317 aa13.03□□□□□ -0.32
COL5A1-206ENST00000465877 H0Y8X5 98 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 SLC31A1O15431 190 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 ZNF883P0CG24 379 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 MX2P20592 715 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 XPAP23025 273 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-206ENST00000465877 AKT2P31751 481 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 CTNNA1P35221 906 aaKnown RBP13.02□□□□□ -0.33
COL5A1-206ENST00000465877 MMP12P39900 470 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 CDKN2BP42772 138 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 CCT8P50990 548 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 SUOXP51687 545 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 DYNLT1P63172 113 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 ELP6Q0PNE2 266 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 SLC10A2Q12908 348 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-206ENST00000465877 HNRNPDQ14103 355 aaKnown RBP13.02□□□□□ -0.33
COL5A1-206ENST00000465877 FGL2Q14314 439 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 TAZQ16635 292 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 ZNF423Q2M1K9 1284 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms