RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 PSMD8P48556 350 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 FNTBP49356 437 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 NRLP54845 237 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 IFI35P80217 286 aaPredicted RBP31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 ARSIQ5FYB1 569 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 DARS2Q6PI48 645 aaKnown RBP31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 PLPP6Q8IY26 295 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 CNTD1Q8N815 330 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 SIPA1Q96FS4 1042 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 NSMCE3Q96MG7 304 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 HEPHQ9BQS7 1158 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 IL36AQ9UHA7 158 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 FBXO4Q9UKT5 387 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 PPM1HQ9ULR3 514 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 ZBTB24O43167 697 aaPredicted RBP31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 TCP1P17987 556 aaKnown RBP31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 SCNN1BP51168 640 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 ZNF776Q68DI1 518 aaPredicted RBP31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 BBS5Q8N3I7 341 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 SLC35B2Q8TB61 432 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 HTR3CQ8WXA8 447 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 PRCCQ92733 491 aaPredicted RBP31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 FBRSQ9HAH7 460 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 EBF1Q9UH73 591 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 SAR1BQ9Y6B6 198 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 RNASEH1O60930 286 aaKnown RBP31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 LEFTY1O75610 366 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 PTPN3P26045 913 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 ITKQ08881 620 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 WASHC5Q12768 1159 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 CST6Q15828 149 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 PIP4K2CQ8TBX8 421 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 AGAP3Q96P47 875 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 MGME1Q9BQP7 344 aa31.01■■■□□ 2.55
CSNK1E-206ENST00000413574 VPS13AQ96RL7 3174 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 CES2O00748 559 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 ALOX15BO15296 676 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 MID1O15344 667 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 NEBLO76041 1014 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 PRLRP16471 622 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 NSUN2Q08J23 767 aaKnown RBP eCLIP31■■■□□ 2.55
CSNK1E-206ENST00000413574 SNX1Q13596 522 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 SRLQ86TD4 932 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 CDKL3Q8IVW4 592 aaPredicted RBP31■■■□□ 2.55
CSNK1E-206ENST00000413574 CAPZA3Q96KX2 299 aa31■■■□□ 2.55
CSNK1E-206ENST00000413574 TTC7AQ9ULT0 858 aaPredicted RBP31■■■□□ 2.55
CSNK1E-206ENST00000413574 LIASO43766 372 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 POP4O95707 220 aaKnown RBP30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 SP9P0CG40 484 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 CR2P20023 1033 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 SLC8A1P32418 973 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 DSG4Q86SJ6 1040 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 ACTRT1Q8TDG2 376 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 ATP8A1Q9Y2Q0 1164 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 DMDP11532 3685 aa30.99■■■□□ 2.55
CSNK1E-206ENST00000413574 PGRMC1O00264 195 aaKnown RBP30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 PLK4O00444 970 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 AXIN1O15169 862 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 KCNN4O15554 427 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 HOXA6P31267 233 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 NUBP1P53384 320 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 ZSCAN30Q86W11 494 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 RLN3Q8WXF3 142 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 AP1M1Q9BXS5 423 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 USP29Q9HBJ7 922 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 INVSQ9Y283 1065 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 BCLAF3A2AJT9 711 aaKnown RBP30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 KPNA3O00505 521 aaPredicted RBP30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 PIGNO95427 931 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 HSPA9P38646 679 aaKnown RBP30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 DSC2Q02487 901 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 TEX44Q53QW1 395 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 FRMD1Q8N878 549 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 MAIP1Q8WWC4 291 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 SEMA3CQ99985 751 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 TMEM121Q9BTD3 319 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 POLR1EQ9GZS1 481 aaKnown RBP30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 NOD2Q9HC29 1040 aa30.98■■■□□ 2.55
CSNK1E-206ENST00000413574 DNTTP04053 509 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 PRNPP04156 253 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 UGT2B4P06133 528 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 CSNK1DP48730 415 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 CREG2Q8IUH2 290 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 ZNF567Q8N184 647 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 AADATQ8N5Z0 425 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 PRELID2Q8N945 189 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 TMIEQ8NEW7 156 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 NUDCD1Q96RS6 583 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 SCUBE2Q9NQ36 999 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 SERGEFQ9UGK8 458 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 MYO15AQ9UKN7 3530 aa30.97■■■□□ 2.55
CSNK1E-206ENST00000413574 C7P10643 843 aa30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 ACADMP11310 421 aa30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 DEKP35659 375 aaKnown RBP30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 NIPAL4Q0D2K0 466 aa30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 BYSLQ13895 437 aaKnown RBP30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 IHHQ14623 411 aa30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 OASLQ15646 514 aaKnown RBP30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 NCEH1Q6PIU2 408 aa30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 CAMK1DQ8IU85 385 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms