RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 SMPD4Q9NXE4 827 aa5.84□□□□□ -1.47
HNRNPC-233ENST00000557768 KCMF1Q9P0J7 381 aa5.84□□□□□ -1.47
HNRNPC-233ENST00000557768 SCOCQ9UIL1 159 aa5.84□□□□□ -1.47
HNRNPC-233ENST00000557768 GMEB2Q9UKD1 530 aa5.84□□□□□ -1.47
HNRNPC-233ENST00000557768 RAB23Q9ULC3 237 aa5.84□□□□□ -1.47
HNRNPC-233ENST00000557768 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.84□□□□□ -1.47
HNRNPC-233ENST00000557768 SCN1AP35498 2009 aa5.84□□□□□ -1.48
HNRNPC-233ENST00000557768 THADAQ6YHU6 1953 aa5.84□□□□□ -1.48
HNRNPC-233ENST00000557768 CNOT1A5YKK6 2376 aaKnown RBP5.84□□□□□ -1.48
HNRNPC-233ENST00000557768 CEP192Q8TEP8 1941 aa5.84□□□□□ -1.48
HNRNPC-233ENST00000557768 SMIM28A0A1B0GU29 152 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 A0A1W2PPL8 197 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 ARHGEF35A5YM69 484 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 POM121BA6NF01 834 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 FAM171A2A8MVW0 826 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 PHGDHO43175 533 aaKnown RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 TRAPPC3O43617 180 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 MOSPD3O75425 235 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 LARGE1O95461 756 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 ZNF888P0CJ79 500 aaPredicted RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 MYL4P12829 197 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CYP11B2P19099 503 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CCNE1P24864 410 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 HOXC13P31276 330 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CXCL12P48061 93 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CCT5P48643 541 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 HK3P52790 923 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 MAPK10P53779 464 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 RRADP55042 308 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 SATB1Q01826 763 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 GUCY1B3Q02153 619 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 MGAT5Q09328 741 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 MGAT2Q10469 447 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 SIM2Q14190 667 aaPredicted RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 USP10Q14694 798 aaKnown RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 STILQ15468 1287 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 ST3GAL2Q16842 350 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 ZNF568Q3ZCX4 644 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 KANK2Q63ZY3 851 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 LAIR1Q6GTX8 287 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 SLC8B1Q6J4K2 584 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 PDZD4Q76G19 769 aaPredicted RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 RTL10Q7L3V2 364 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 DIS3L2Q8IYB7 885 aaKnown RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 SH2D3CQ8N5H7 860 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CCDC33Q8N5R6 958 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 C3orf20Q8ND61 904 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 SMARCD2Q92925 531 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 C18orf25Q96B23 403 aaPredicted RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CLPTM1LQ96KA5 538 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 UROC1Q96N76 676 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 ZMAT2Q96NC0 199 aaKnown RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 OR10A5Q9H207 317 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 ZNF334Q9HCZ1 680 aaPredicted RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 LMBRD1Q9NUN5 540 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 TDP1Q9NUW8 608 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CEP72Q9P209 647 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 FBXL5Q9UKA1 691 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CNOT11Q9UKZ1 510 aaKnown RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 PCDHA3Q9Y5H8 950 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 INSL5Q9Y5Q6 135 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 PIAS3Q9Y6X2 628 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 HELZP42694 1942 aaKnown RBP5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 ANAPC1Q9H1A4 1944 aa5.83□□□□□ -1.48
HNRNPC-233ENST00000557768 CHD6Q8TD26 2715 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 SLC38A8A6NNN8 435 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 CCDC169A6NNP5 214 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 H7C4K7 107 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 K7ERI5 159 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 FOXN3O00409 490 aaPredicted RBP5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 PODXLO00592 558 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 ZNF197O14709 1029 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 SLC30A4O14863 429 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 ZNF263O14978 683 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 FRS3O43559 492 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 AKR1B10O60218 316 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 JAK2O60674 1132 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 CUTAO60888 179 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 RETP07949 1114 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 ADRB1P08588 477 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 CHRNB1P11230 501 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 HARSP12081 509 aaKnown RBP5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 PSMC3P17980 439 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 RPA1P27694 616 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 GRK6P43250 576 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 CCR3P51677 355 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 EFNA5P52803 228 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 CD83Q01151 205 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 TWF1Q12792 350 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 TOP3AQ13472 1001 aaPredicted RBP5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 TRIM29Q14134 588 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 TEAD2Q15562 447 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 CTXN3Q4LDR2 81 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 CYP4A22Q5TCH4 519 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 ALKAL1Q6UXT8 129 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 MMS22LQ6ZRQ5 1243 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 Q6ZS52 159 aa5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.82□□□□□ -1.48
HNRNPC-233ENST00000557768 LIX1LQ8IVB5 337 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms