RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CDKN3Q16667 212 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 FAM174BQ3ZCQ3 159 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 MTERF2Q49AM1 385 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 LIPNQ5VXI9 398 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 FAM160B1Q5W0V3 765 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 POMZP3Q6PJE2 187 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 GK5Q6ZS86 529 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 EFL1Q7Z2Z2 1120 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 DDX42Q86XP3 938 aaKnown RBP eCLIP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TMPRSS6Q8IU80 811 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 APLFQ8IW19 511 aaPredicted RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 RHOT1Q8IXI2 618 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 C3orf56Q8N813 242 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 MAB21L3Q8N8X9 362 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 PLEKHO2Q8TD55 490 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 PSMG2Q969U7 264 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 RMND5BQ96G75 393 aaPredicted RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 NT5C1BQ96P26 610 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 BARD1Q99728 777 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 GABRG3Q99928 467 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 DDX50Q9BQ39 737 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TREX2Q9BQ50 279 aaPredicted RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TMEM121Q9BTD3 319 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF747Q9BV97 191 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 SYNDIG1Q9H7V2 258 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 C1orf115Q9H7X2 142 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 GP6Q9HCN6 339 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 MLXIPLQ9NP71 852 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TMLHEQ9NVH6 421 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 NLGN3Q9NZ94 848 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 AKAP7Q9P0M2 348 aaPredicted RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 C11orf21Q9P2W6 132 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 G3BP2Q9UN86 482 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 HDAC5Q9UQL6 1122 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 WBP11Q9Y2W2 641 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 YIPF1Q9Y548 306 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TRRAPQ9Y4A5 3859 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 ANK1P16157 1881 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 NUP210Q8TEM1 1887 aaPredicted RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TDRD6O60522 2096 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 COL7A1Q02388 2944 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 EME2A4GXA9 379 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 GCOM1H8Y6P7 765 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CCL21O00585 134 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MAFGO15525 162 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 GREM1O60565 184 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 DNAJA2O60884 412 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 PRDM1O75626 825 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 B3GAT3O94766 335 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 TMEM63AO94886 807 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLPIP03973 132 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 POLR2MP0CAP2 368 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KCNA2P16389 499 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 PDE6AP16499 860 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CD247P20963 164 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 HOXA13P31271 388 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CCKBRP32239 447 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 ACSL1P33121 698 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MC3RP41968 323 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 PDX1P52945 283 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 GHRHRQ02643 423 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KDSRQ06136 332 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 EXOSC9Q06265 439 aaKnown RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KEAP1Q14145 624 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 FHL2Q14192 279 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KIR3DS1Q14943 382 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 TTF1Q15361 905 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CHRNA6Q15825 494 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CDC37Q16543 378 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 FUT11Q495W5 492 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SEZ6Q53EL9 994 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 C10orf76Q5T2E6 689 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MROH9Q5TGP6 573 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 PAPD7Q5XG87 772 aaKnown RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 BTBD8Q5XKL5 378 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 NAPEPLDQ6IQ20 393 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 HEPHL1Q6MZM0 1159 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 GUSBP11Q6P575 273 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CRTC1Q6UUV9 634 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CD300LDQ6UXZ3 194 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SPRED1Q7Z699 444 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 TECPR1Q7Z6L1 1165 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MON1AQ86VX9 555 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KCNMB4Q86W47 210 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MIB1Q86YT6 1006 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CKAP2LQ8IYA6 745 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KLHL36Q8N4N3 616 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 AMER2Q8N7J2 671 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 ACBD4Q8NC06 268 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 TMEM52Q8NDY8 209 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 STARD8Q92502 1023 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 WASF1Q92558 559 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MRPS31Q92665 395 aaKnown RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 GPRASP2Q96D09 838 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SPATA32Q96LK8 384 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 FERD3LQ96RJ6 166 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 ACOX2Q99424 681 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 PAAF1Q9BRP4 392 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 ORAI3Q9BRQ5 295 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms