RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ELNP15502 786 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 GABRB3P28472 473 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 GRIK1P39086 918 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 GJA9P57773 515 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 CBLBQ13191 982 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 ARL13BQ3SXY8 428 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 KYAT3Q6YP21 454 aaKnown RBP15.02□□□□□ -0.01
DDX55-209ENST00000542286 RAPH1Q70E73 1250 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 TTC9BQ8N6N2 239 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 HIPK4Q8NE63 616 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 NTAN1Q96AB6 310 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 SGF29Q96ES7 293 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 FERMT1Q9BQL6 677 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 MTG1Q9BT17 334 aaPredicted RBP15.02□□□□□ -0.01
DDX55-209ENST00000542286 CASS4Q9NQ75 786 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 MKS1Q9NXB0 559 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 PAGE1O75459 146 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 GJB3O75712 270 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 PDE5AO76074 875 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 FBXO21O94952 628 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 CPA3P15088 417 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 CCND3P30281 292 aaPredicted RBP15.02□□□□□ -0.01
DDX55-209ENST00000542286 MAXP61244 160 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 GALNT2Q10471 571 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 LSAMPQ13449 338 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 MYBPC3Q14896 1274 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 DDR2Q16832 855 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 SMYD5Q6GMV2 418 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 IZUMO2Q6UXV1 221 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 TMEM135Q86UB9 458 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 CCDC124Q96CT7 223 aaKnown RBP15.02□□□□□ -0.01
DDX55-209ENST00000542286 TEKT5Q96M29 485 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 OMDQ99983 421 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 DNAI2Q9GZS0 605 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 ABI2Q9NYB9 513 aaPredicted RBP15.02□□□□□ -0.01
DDX55-209ENST00000542286 NEU3Q9UQ49 428 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 PRG3Q9Y2Y8 225 aaPredicted RBP15.02□□□□□ -0.01
DDX55-209ENST00000542286 TBX18O95935 607 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 IMPDH2P12268 514 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 GRK4P32298 578 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 IDH3AP50213 366 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 SLC5A3P53794 718 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 SCAPQ12770 1279 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 SLC9B1Q4ZJI4 515 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 INTS6LQ5JSJ4 861 aaKnown RBP15.01□□□□□ -0.01
DDX55-209ENST00000542286 OVOS1Q6IE37 1185 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 ESRP1Q6NXG1 681 aaKnown RBP15.01□□□□□ -0.01
DDX55-209ENST00000542286 IFNL1Q8IU54 200 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 SLC41A1Q8IVJ1 513 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 VPS39Q96JC1 886 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 HAPLN3Q96S86 360 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 CENPKQ9BS16 269 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 FICDQ9BVA6 458 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 SLC39A8Q9C0K1 460 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 WDR55Q9H6Y2 383 aaPredicted RBP15.01□□□□□ -0.01
DDX55-209ENST00000542286 DNAAF2Q9NVR5 837 aaKnown RBP15.01□□□□□ -0.01
DDX55-209ENST00000542286 PDE4DIPQ5VU43 2346 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 BIRC5O15392 142 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 DUSP11O75319 330 aaKnown RBP15.01□□□□□ -0.01
DDX55-209ENST00000542286 VAPBO95292 243 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 EPHB1P54762 984 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 FKBP1BP68106 108 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 MPP3Q13368 585 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 KRT72Q14CN4 511 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 SPANXN3Q5MJ09 141 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 IL31Q6EBC2 164 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 RPS27LQ71UM5 84 aaKnown RBP15.01□□□□□ -0.01
DDX55-209ENST00000542286 SERINC5Q86VE9 423 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 MFSD6LQ8IWD5 586 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 ARHGAP12Q8IWW6 846 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 TRIM42Q8IWZ5 723 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 URGCPQ8TCY9 931 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 MARK4Q96L34 752 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 HCSTQ9UBK5 93 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 COMMD3-BMI1R4GMX3 469 aa15.01□□□□□ -0.01
DDX55-209ENST00000542286 G3V2L1 256 aa15□□□□□ -0.01
DDX55-209ENST00000542286 ZSCAN9O15535 394 aaPredicted RBP15□□□□□ -0.01
DDX55-209ENST00000542286 SIN3BO75182 1162 aa15□□□□□ -0.01
DDX55-209ENST00000542286 PENKP01210 267 aaPredicted RBP15□□□□□ -0.01
DDX55-209ENST00000542286 SPATA31D3P0C874 917 aa15□□□□□ -0.01
DDX55-209ENST00000542286 ODC1P11926 461 aa15□□□□□ -0.01
DDX55-209ENST00000542286 FLT3LGP49771 235 aa15□□□□□ -0.01
DDX55-209ENST00000542286 CDK7P50613 346 aa15□□□□□ -0.01
DDX55-209ENST00000542286 LIMK2P53671 638 aa15□□□□□ -0.01
DDX55-209ENST00000542286 LPIN1Q14693 890 aa15□□□□□ -0.01
DDX55-209ENST00000542286 KCNA10Q16322 511 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SLC39A12Q504Y0 691 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SPATA31D4Q6ZUB0 917 aa15□□□□□ -0.01
DDX55-209ENST00000542286 TMEM86AQ8N2M4 240 aa15□□□□□ -0.01
DDX55-209ENST00000542286 KCTD4Q8WVF5 259 aa15□□□□□ -0.01
DDX55-209ENST00000542286 HDAC11Q96DB2 347 aa15□□□□□ -0.01
DDX55-209ENST00000542286 FCRL2Q96LA5 508 aaPredicted RBP15□□□□□ -0.01
DDX55-209ENST00000542286 KLHL5Q96PQ7 755 aa15□□□□□ -0.01
DDX55-209ENST00000542286 PANX3Q96QZ0 392 aa15□□□□□ -0.01
DDX55-209ENST00000542286 CPNE1Q99829 537 aa15□□□□□ -0.01
DDX55-209ENST00000542286 DCDC2Q9UHG0 476 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SLC7A8Q9UHI5 535 aa15□□□□□ -0.01
DDX55-209ENST00000542286 DCXO43602 365 aa15□□□□□ -0.01
DDX55-209ENST00000542286 TOMM70O94826 608 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SERPINE1P05121 402 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 900.9 ms