RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PRNPP04156 253 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 WNT1P04628 370 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 C21orf59P57076 290 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 TAS2R38P59533 333 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 SLC20A2Q08357 652 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 NR1I3Q14994 352 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 ZNF423Q2M1K9 1284 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 PIP5KL1Q5T9C9 394 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 PPP1R2P3Q6NXS1 205 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 PYROXD2Q8N2H3 581 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 TMIEQ8NEW7 156 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 GRIN3AQ8TCU5 1115 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 VCPIP1Q96JH7 1222 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 SERAC1Q96JX3 654 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 CBX8Q9HC52 389 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 AASDHPPTQ9NRN7 309 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 DNAI1Q9UI46 699 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 PCOLCE2Q9UKZ9 415 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 CXorf51AA0A1B0GTR3 108 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 TMCO5BA8MYB1 307 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 H0Y8X5 98 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 RNF103O00237 685 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 KCNK3O14649 394 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 FLRT2O43155 660 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 CD160O95971 181 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 SPINK2P20155 84 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 L1CAMP32004 1257 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 PRKCIP41743 596 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 RECQLP46063 649 aaPredicted RBP19.31■□□□□ 0.68
COL5A1-203ENST00000460264 OGDHQ02218 1023 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 MAMLD1Q13495 774 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 TRIP6Q15654 476 aaKnown RBP19.31■□□□□ 0.68
COL5A1-203ENST00000460264 EFHC2Q5JST6 749 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 SFMBT2Q5VUG0 894 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 SCYL2Q6P3W7 929 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 DCUN1D2Q6PH85 259 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 DBX2Q6ZNG2 339 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 DPY19L3Q6ZPD9 716 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 ZNF571Q7Z3V5 609 aaPredicted RBP19.31■□□□□ 0.68
COL5A1-203ENST00000460264 LUZP1Q86V48 1076 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 TRIM69Q86WT6 500 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 PCDH20Q8N6Y1 951 aaKnown RBP19.31■□□□□ 0.68
COL5A1-203ENST00000460264 SETD7Q8WTS6 366 aaKnown RBP19.31■□□□□ 0.68
COL5A1-203ENST00000460264 ARHGEF2Q92974 986 aaKnown RBP19.31■□□□□ 0.68
COL5A1-203ENST00000460264 ARRDC3Q96B67 414 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 MAGEH1Q9H213 219 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 HAUS4Q9H6D7 363 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 PREBQ9HCU5 417 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 ARHGAP20Q9P2F6 1191 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 IL36AQ9UHA7 158 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 PCDHB9Q9Y5E1 797 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 ACTL7AQ9Y615 435 aa19.31■□□□□ 0.68
COL5A1-203ENST00000460264 A0A1W2PR77 199 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 ATMINO43313 823 aaPredicted RBP19.3■□□□□ 0.68
COL5A1-203ENST00000460264 CD38P28907 300 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 MAT2AP31153 395 aaKnown RBP19.3■□□□□ 0.68
COL5A1-203ENST00000460264 CCT8P50990 548 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 AIF1P55008 147 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 NAPEPLDQ6IQ20 393 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 TMC6Q7Z403 805 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 BAHD1Q8TBE0 780 aaPredicted RBP19.3■□□□□ 0.68
COL5A1-203ENST00000460264 SKA1Q96BD8 255 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 SCNM1Q9BWG6 230 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 EDEM3Q9BZQ6 932 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 PARVAQ9NVD7 372 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 FZD10Q9ULW2 581 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 FCF1Q9Y324 198 aaKnown RBP19.3■□□□□ 0.68
COL5A1-203ENST00000460264 WASF2Q9Y6W5 498 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 CACNA1BQ00975 2339 aa19.3■□□□□ 0.68
COL5A1-203ENST00000460264 HYAL3O43820 417 aaPredicted RBP19.29■□□□□ 0.68
COL5A1-203ENST00000460264 PCDHGA12O60330 932 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 DFNA5O60443 496 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 RAMP2O60895 175 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 LEFTY1O75610 366 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 EPHB2P29323 1055 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 NUDT1P36639 197 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 CCNHP51946 323 aaPredicted RBP19.29■□□□□ 0.68
COL5A1-203ENST00000460264 TPM4P67936 248 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 FANCCQ00597 558 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 KLHL30Q0D2K2 578 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 ARSIQ5FYB1 569 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 FIGNQ5HY92 759 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 PLEKHA7Q6IQ23 1121 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 GLRX5Q86SX6 157 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 PRPF39Q86UA1 669 aaKnown RBP19.29■□□□□ 0.68
COL5A1-203ENST00000460264 DNAAF5Q86Y56 855 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 RTL3Q8N8U3 475 aaKnown RBP19.29■□□□□ 0.68
COL5A1-203ENST00000460264 ISG20Q96AZ6 181 aaKnown RBP19.29■□□□□ 0.68
COL5A1-203ENST00000460264 HDAC8Q9BY41 377 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 NOL6Q9H6R4 1146 aaKnown RBP19.29■□□□□ 0.68
COL5A1-203ENST00000460264 DYRK4Q9NR20 520 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 DMTF1Q9Y222 760 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 BTBD3Q9Y2F9 522 aa19.29■□□□□ 0.68
COL5A1-203ENST00000460264 DDX3XO00571 662 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL5A1-203ENST00000460264 GZMAP12544 262 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 DESP17661 470 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 GEMIN4P57678 1058 aaKnown RBP19.28■□□□□ 0.68
COL5A1-203ENST00000460264 CCDC15Q0P6D6 951 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 SUZ12Q15022 739 aaKnown RBP19.28■□□□□ 0.68
COL5A1-203ENST00000460264 POLD3Q15054 466 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms