RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 C6orf203Q9P0P8 240 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-206ENST00000612899 COG5Q9UP83 839 aa12.69□□□□□ -0.38
TNFAIP3-206ENST00000612899 NT5C1B-RDH14C9J2C7 533 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 ALOX15BO15296 676 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 ALDH1A2O94788 518 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 WDR47O94967 919 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 PARNO95453 639 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 C4BPAP04003 597 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 IMPDH2P12268 514 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 RPL14P50914 215 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLC16A1P53985 500 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLC34A1Q06495 639 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 MTA1Q13330 715 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 HECTD3Q5T447 861 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLC41A1Q8IVJ1 513 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 PPTC7Q8NI37 304 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 ERLEC1Q96DZ1 483 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZFYVE19Q96K21 471 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SAR1AQ9NR31 198 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 IGKV6D-41A0A0C4DH26 115 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SMIM28A0A1B0GU29 152 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 CCNHP51946 323 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 PLEKHA7Q6IQ23 1121 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 ATG16L2Q8NAA4 619 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 MCOLN3Q8TDD5 553 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 GPR152Q8TDT2 470 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 FIG4Q92562 907 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 NDNQ99608 321 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 HGH1Q9BTY7 390 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 WDR41Q9HAD4 459 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 PRDM16Q9HAZ2 1276 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 MIEF1Q9NQG6 463 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 CATSPERZQ9NTU4 200 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 IPPQ9Y573 584 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 A0A1W2PPM1 405 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 LIN7AO14910 233 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 CABYRO75952 493 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 CLPTM1O96005 669 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 HDCP19113 662 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 S100A1P23297 94 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 FASP25445 335 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 GRK3P35626 688 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 IL2P60568 153 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 PDK4Q16654 411 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 C9orf57Q5W0N0 161 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 CWF19L1Q69YN2 538 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 TMCO5AQ8N6Q1 288 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 PCDH20Q8N6Y1 951 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 C1orf127Q8N9H9 656 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZSCAN18Q8TBC5 510 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SH3GL2Q99962 352 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 C2orf49Q9BVC5 232 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 DUSP16Q9BY84 665 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 STARD13Q9Y3M8 1113 aa12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLIT3O75094 1523 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 GPR25O00155 361 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 DDX3YO15523 660 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 DAB1O75553 588 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ABCB1P08183 1280 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 DARSP14868 501 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ALDH9A1P49189 494 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 SP3Q02447 781 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 CTBP1Q13363 440 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 IKBKEQ14164 716 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 GPSM1Q86YR5 675 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 CLEC4DQ8WXI8 215 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZYG11BQ9C0D3 744 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 MPP6Q9NZW5 540 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 BTBD7Q9P203 1132 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 UXTQ9UBK9 157 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 PACSIN3Q9UKS6 424 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 PADI4Q9UM07 663 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 CYP2A7P20853 494 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 DHFR2Q86XF0 187 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 TTYH3Q9C0H2 523 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZNF112Q9UJU3 913 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 PCDHA11Q9Y5I1 949 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 IFRD1O00458 451 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 PAPSS1O43252 624 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 LRCH4O75427 683 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 ITGA2BP08514 1039 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 VCLP18206 1134 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 FLT3LGP49771 235 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 HSPA14Q0VDF9 509 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 PABPC1LQ4VXU2 614 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 RGMBQ6NW40 437 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 FCRL2Q96LA5 508 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 RERGLQ9H628 205 aa12.67□□□□□ -0.38
TNFAIP3-206ENST00000612899 TMCC3Q9ULS5 477 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms