RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CSRP2Q16527 193 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 KCNT1Q5JUK3 1230 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 SYCP2LQ5T4T6 812 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 LYSMD4Q5XG99 296 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 LINGO4Q6UY18 593 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 CYP4V2Q6ZWL3 525 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 MMAAQ8IVH4 418 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 LZTR1Q8N653 840 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 PCDH20Q8N6Y1 951 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 CADM4Q8NFZ8 388 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 CASKIN2Q8WXE0 1202 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 ISG20Q96AZ6 181 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 OMDQ99983 421 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 BTBD1Q9H0C5 482 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 PCED1AQ9H1Q7 454 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 SGK2Q9HBY8 427 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 VPS45Q9NRW7 570 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 FBXL12Q9NXK8 326 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 ARHGAP42A6NI28 874 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 RASA4BC9J798 803 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 RASA4O43374 803 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 BUB1O43683 1085 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 BNIP3LO60238 219 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 MTA2O94776 668 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 ERCC2P18074 760 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 GLDCP23378 1020 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 PSMD8P48556 350 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 ARF5P84085 180 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 ZNF33AQ06730 810 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 SPEM2Q0P670 501 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 CCDC15Q0P6D6 951 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 MESDQ14696 234 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 SMTNL2Q2TAL5 461 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 WDR45BQ5MNZ6 344 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 DAB2IPQ5VWQ8 1189 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 C22orf39Q6P5X5 142 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 Q6ZVU0 165 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 MAP7D3Q8IWC1 876 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 ZNF419Q96HQ0 510 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 GPR174Q9BXC1 333 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 OSGEPQ9NPF4 335 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 SEMA4GQ9NTN9 838 aa17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 RCOR3Q9P2K3 495 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 EPN1Q9Y6I3 576 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-212ENST00000596163 TMEM110-MUSTN1A8MSY1 372 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 K7ERQ8 282 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 MID1O15344 667 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 SMAD6O43541 496 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 PRNPP04156 253 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 ZNF806P0C7X5 589 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 VAV1P15498 845 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 FECHP22830 423 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 HOXD12P35452 270 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 MPLP40238 635 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 SLC1A1P43005 524 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 DNA2P51530 1060 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 SLC25A11Q02978 314 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 SERINC3Q13530 473 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 INO80DQ53TQ3 878 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 CARD16Q5EG05 197 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 RABEPKQ7Z6M1 372 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 FAM124AQ86V42 546 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 SYT12Q8IV01 421 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 PLPP6Q8IY26 295 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 KCTD6Q8NC69 237 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 PIGKQ92643 395 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 HMCESQ96FZ2 354 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 PPM1HQ9ULR3 514 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 FZD4Q9ULV1 537 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 PCDHA13Q9Y5I0 950 aa17.63■□□□□ 0.41
SHKBP1-212ENST00000596163 MUC22E2RYF6 1773 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 RNASEH2AO75792 299 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 NDUFA10O95299 355 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 TCF4P15884 667 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 CHRNA3P32297 505 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 PTGER3P43115 390 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 NOP2P46087 812 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 CDH6P55285 790 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 LMNB2Q03252 620 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 DPYSQ14117 519 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 PDK2Q15119 407 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 ZFYVE27Q5T4F4 411 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 TMCO3Q6UWJ1 677 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 ARMCX6Q7L4S7 300 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 KIAA2013Q8IYS2 634 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 RGL4Q8IZJ4 473 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 TXLNBQ8N3L3 684 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 HDDC3Q8N4P3 179 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 DEFB119Q8N690 84 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 SPC24Q8NBT2 197 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 TMIEQ8NEW7 156 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 OR2A12Q8NGT7 310 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 CEP76Q8TAP6 659 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 CALR3Q96L12 384 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 BAG1Q99933 345 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 NOL6Q9H6R4 1146 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms