RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PCDH20Q8N6Y1 951 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 ZMIZ2Q8NF64 920 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 NAT14Q8WUY8 206 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 NXNL1Q96CM4 212 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 RTP4Q96DX8 246 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 MS4A4AQ96JQ5 239 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 GCNAQ96QF7 691 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 CDRT15Q96T59 188 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 BRD8Q9H0E9 1235 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 NT5MQ9NPB1 228 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 TLL2Q9Y6L7 1015 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 PAPPA2Q9BXP8 1791 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TM7SF2O76062 418 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 PEX2P28328 305 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 ART3Q13508 389 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 PTPRCAPQ14761 206 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 DNAL1Q4LDG9 190 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TSC22D3Q99576 134 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 ZNF184Q99676 751 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TMLHEQ9NVH6 421 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 OR51F1A6NGY5 319 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TRIM13O60858 407 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 F2P00734 622 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TSHRP16473 764 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 SPATA24Q86W54 205 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 SHCBP1Q8NEM2 672 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 OLFM3Q96PB7 478 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 CPNE1Q99829 537 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 AGO3Q9H9G7 860 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 MTF2Q9Y483 593 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 SMIM35A0A1B0GVV1 85 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 HNRNPCL1O60812 293 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 NELFEP18615 380 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 GPR15P49685 360 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 USP50Q70EL3 339 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 MARK2Q7KZI7 788 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TMC7Q7Z402 723 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 RBBP8Q99708 897 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 CCDC106Q9BWC9 280 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 KATNBL1Q9H079 304 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 ILKAPQ9H0C8 392 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 TRPV6Q9H1D0 765 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 DONSONQ9NYP3 566 aa13.9□□□□□ -0.18
PRPF40B-209ENST00000548825 AP2A1O95782 977 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 KRT72Q14CN4 511 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 METTL23Q86XA0 190 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 DQX1Q8TE96 717 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 CENPIQ92674 756 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 RCN3Q96D15 328 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 FCRL2Q96LA5 508 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 CYP2S1Q96SQ9 504 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 SORT1Q99523 831 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 NPAS2Q99743 824 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 EBF3Q9H4W6 596 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 BATF3Q9NR55 127 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 HACD1B0YJ81 288 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 WFS1O76024 890 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 FGFR3P22607 806 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 GRK4P32298 578 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 PBX3P40426 434 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 NIPAL4Q0D2K0 466 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 SH2D4BQ5SQS7 431 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 ITPRIPL1Q6GPH6 555 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 CNTD1Q8N815 330 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 PDCD6IPQ8WUM4 868 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 ADAM2Q99965 735 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 USP3Q9Y6I4 520 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 MYOCOSA0A1B0GUC4 107 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 CAPN14A8MX76 684 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 TRAFD1O14545 582 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 AHSGP02765 367 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 GSTA2P09210 222 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 LINGO3P0C6S8 592 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 CASP2P42575 452 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 OR1G1P47890 313 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 CDH13P55290 713 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 BTKQ06187 659 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 EFEMP1Q12805 493 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC39A12Q504Y0 691 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 GRTP1Q5TC63 336 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 FSTL5Q8N475 847 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 SEMA6AQ9H2E6 1030 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 WDR6Q9NNW5 1121 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 STX18Q9P2W9 335 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 FBXW11Q9UKB1 542 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 LRRC42Q9Y546 428 aa13.89□□□□□ -0.19
PRPF40B-209ENST00000548825 DCLK1O15075 740 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 PEX1O43933 1283 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 SNNO75324 88 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 PAGE1O75459 146 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 GJB3O75712 270 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 KLHL2O95198 593 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms