RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SCYL2Q6P3W7 929 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 C22orf39Q6P5X5 142 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 SLFN11Q7Z7L1 901 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 PIP4P1Q86T03 277 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 MCOLN2Q8IZK6 566 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 TBC1D3Q8IZP1 549 aaPredicted RBP17.99■□□□□ 0.47
NUP50-208ENST00000430547 NTAN1Q96AB6 310 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 ACE2Q9BYF1 805 aaPredicted RBP17.99■□□□□ 0.47
NUP50-208ENST00000430547 RETREG1Q9H6L5 497 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 DYRK4Q9NR20 520 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 PCDHB9Q9Y5E1 797 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 SLCO1B1Q9Y6L6 691 aa17.99■□□□□ 0.47
NUP50-208ENST00000430547 K7ERQ8 282 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 GJB3O75712 270 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 LRIG2O94898 1065 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 PLEKP08567 350 aaPredicted RBP17.98■□□□□ 0.47
NUP50-208ENST00000430547 CD59P13987 128 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 RHOQP17081 205 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 GLDCP23378 1020 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 CCR5P51681 352 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 C21orf59P57076 290 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 RACK1P63244 317 aaKnown RBP17.98■□□□□ 0.47
NUP50-208ENST00000430547 KLHL30Q0D2K2 578 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 CCDC15Q0P6D6 951 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 FOXC1Q12948 553 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 MANEALQ5VSG8 457 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 NAXDQ8IW45 347 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 VCPIP1Q96JH7 1222 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 NAP1L5Q96NT1 182 aaPredicted RBP17.98■□□□□ 0.47
NUP50-208ENST00000430547 CNPY3Q9BT09 278 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 KDM4CQ9H3R0 1056 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 HAUS4Q9H6D7 363 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 CBX8Q9HC52 389 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 AASDHPPTQ9NRN7 309 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 TM7SF3Q9NS93 570 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 ZNF212Q9UDV6 495 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 DNAI1Q9UI46 699 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 SARDHQ9UL12 918 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 PPM1HQ9ULR3 514 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 HPCAL4Q9UM19 191 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 ANKRD6Q9Y2G4 727 aa17.98■□□□□ 0.47
NUP50-208ENST00000430547 PLK4O00444 970 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 KPNA3O00505 521 aaPredicted RBP17.97■□□□□ 0.47
NUP50-208ENST00000430547 SMAD6O43541 496 aaKnown RBP17.97■□□□□ 0.47
NUP50-208ENST00000430547 RTN2O75298 545 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 PRNPP04156 253 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 ZNF883P0CG24 379 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 CHRNA3P32297 505 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 SERPINH1P50454 418 aaKnown RBP17.97■□□□□ 0.47
NUP50-208ENST00000430547 METAP1P53582 386 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 AIF1P55008 147 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 GEMIN4P57678 1058 aaKnown RBP17.97■□□□□ 0.47
NUP50-208ENST00000430547 RPL7AP62424 266 aaKnown RBP17.97■□□□□ 0.47
NUP50-208ENST00000430547 SIM1P81133 766 aaPredicted RBP17.97■□□□□ 0.47
NUP50-208ENST00000430547 SLC20A2Q08357 652 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 SCAPQ12770 1279 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 CNTN1Q12860 1018 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 KIF19Q2TAC6 998 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 SLC45A4Q5BKX6 768 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 LAYNQ6UX15 382 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 LUZP1Q86V48 1076 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 ZNF354CQ86Y25 554 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 OR2A12Q8NGT7 310 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 SLC6A18Q96N87 628 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 CNTNAP3BQ96NU0 1288 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 CNTNAP3Q9BZ76 1288 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 EDEM3Q9BZQ6 932 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 TNKS2Q9H2K2 1166 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 IL21RQ9HBE5 538 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 PARVAQ9NVD7 372 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 TMEM248Q9NWD8 314 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 AIPL1Q9NZN9 384 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 KNL1Q8NG31 2342 aa17.97■□□□□ 0.47
NUP50-208ENST00000430547 DOCK9Q9BZ29 2069 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 SPAARA0A1B0GVQ0 90 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 TCRBV5S1A1TA0A578 114 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 FAM72CH0Y354 149 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 PLRG1O43660 514 aaKnown RBP17.96■□□□□ 0.47
NUP50-208ENST00000430547 SH3BP5O60239 455 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 RAMP2O60895 175 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 DNA2P51530 1060 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 BNC1Q01954 994 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 NR1I3Q14994 352 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 SUZ12Q15022 739 aaKnown RBP17.96■□□□□ 0.47
NUP50-208ENST00000430547 FAM72AQ5TYM5 149 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 FAM72DQ6L9T8 149 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 TMC6Q7Z403 805 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 PRPF39Q86UA1 669 aaKnown RBP17.96■□□□□ 0.47
NUP50-208ENST00000430547 FAM72BQ86X60 149 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 PCDH20Q8N6Y1 951 aaKnown RBP17.96■□□□□ 0.47
NUP50-208ENST00000430547 GRIN3AQ8TCU5 1115 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 SETD7Q8WTS6 366 aaKnown RBP17.96■□□□□ 0.47
NUP50-208ENST00000430547 PPP1R16AQ96I34 528 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 SERAC1Q96JX3 654 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 EPAS1Q99814 870 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 SYT11Q9BT88 431 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 CEP44Q9C0F1 390 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 MAGEH1Q9H213 219 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 TAS2R14Q9NYV8 317 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 IL36AQ9UHA7 158 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 232.1 ms