RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SLC32A1Q9H598 525 aa18.42■□□□□ 0.54
TRAPPC3-202ENST00000373162 GAREM1Q9H706 876 aa18.42■□□□□ 0.54
TRAPPC3-202ENST00000373162 ARHGAP20Q9P2F6 1191 aa18.42■□□□□ 0.54
TRAPPC3-202ENST00000373162 ANKRD6Q9Y2G4 727 aa18.42■□□□□ 0.54
TRAPPC3-202ENST00000373162 PCDHGB2Q9Y5G2 931 aa18.42■□□□□ 0.54
TRAPPC3-202ENST00000373162 SNX11Q9Y5W9 270 aa18.42■□□□□ 0.54
TRAPPC3-202ENST00000373162 SPEGQ15772 3267 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 PLK4O00444 970 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 VILLO15195 856 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 CER1O95813 267 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 IL1BP01584 269 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 CALB1P05937 261 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 KRT3P12035 628 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 FERP16591 822 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 CDK11BP21127 795 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 CLCN6P51797 869 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 RACK1P63244 317 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 KRT83P78385 493 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 HNRNPDQ14103 355 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 C6orf118Q5T5N4 469 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 PIP4K2CQ8TBX8 421 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 SNX19Q92543 992 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 SLC6A18Q96N87 628 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 OMDQ99983 421 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 MUC3BQ9H195 1237 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 KDM4CQ9H3R0 1056 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 RETREG1Q9H6L5 497 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 TAS2R14Q9NYV8 317 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 PCOLCE2Q9UKZ9 415 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 TPX2Q9ULW0 747 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 DOCK9Q9BZ29 2069 aa18.41■□□□□ 0.54
TRAPPC3-202ENST00000373162 A0A1W2PQC6 194 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 LRRC72A6NJI9 287 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 CCP110O43303 1012 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 LRIG2O94898 1065 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 DKK1O94907 266 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 RRM1P23921 792 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 OR1E1P30953 314 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 OGDHQ02218 1023 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 GNA12Q03113 381 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 CNTN1Q12860 1018 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 CDO1Q16878 200 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 PIP5KL1Q5T9C9 394 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 C22orf39Q6P5X5 142 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 MCOLN2Q8IZK6 566 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 FAM172AQ8WUF8 416 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 PCMTD1Q96MG8 357 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 NAT10Q9H0A0 1025 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 TM7SF3Q9NS93 570 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 TMEM248Q9NWD8 314 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 OR12D3Q9UGF7 316 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 WASF2Q9Y6W5 498 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 ZZEF1O43149 2961 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 FAM208BQ5VWN6 2430 aa18.4■□□□□ 0.54
TRAPPC3-202ENST00000373162 COL5A1P20908 1838 aaPredicted RBP18.39■□□□□ 0.54
TRAPPC3-202ENST00000373162 FAM221BA6H8Z2 402 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 SRGAP2O75044 1071 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 RTN2O75298 545 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 RHOQP17081 205 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 GPD1P21695 349 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 PRKCIP41743 596 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 MAPKAPK2P49137 400 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 ZNF165P49910 485 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 SERPINH1P50454 418 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 ZNF143P52747 638 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 RPL7AP62424 266 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 ACAD10Q6JQN1 1059 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 LINGO4Q6UY18 593 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 DSG4Q86SJ6 1040 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 TRIM69Q86WT6 500 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 CHST14Q8NCH0 376 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 TMIEQ8NEW7 156 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 GANCQ8TET4 914 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 ARRDC3Q96B67 414 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 NOL6Q9H6R4 1146 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 TOR4AQ9NXH8 423 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 WDFY3Q8IZQ1 3526 aa18.39■□□□□ 0.53
TRAPPC3-202ENST00000373162 FAM47DPA6NHR8 397 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 LRRC53A6NM62 1247 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 SMTNL1A8MU46 457 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 H0Y8X5 98 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 PCDHGA12O60330 932 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 SPINK2P20155 84 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 CHRNA3P32297 505 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 ACVRL1P37023 503 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 PBX1P40424 430 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 SIM1P81133 766 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 FOXC1Q12948 553 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 SHBQ15464 509 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 TEAD4Q15561 434 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 ST3GAL2Q16842 350 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 KLHL40Q2TBA0 621 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 ACCSLQ4AC99 568 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 FAM46CQ5VWP2 391 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 RAB44Q7Z6P3 723 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 ATP11CQ8NB49 1132 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 OR14C36Q8NHC7 312 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms