RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 C1orf21Q9H246 121 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 CAB39LQ9H9S4 337 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 ARHGEF38Q9NXL2 777 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.16■□□□□ 0.34
NUP50-203ENST00000407019 SCN10AQ9Y5Y9 1956 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 DFFAO00273 331 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 CIB2O75838 187 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 TM7SF2O76062 418 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 PGK1P00558 417 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 RPLP2P05387 115 aaKnown RBP17.16■□□□□ 0.34
NUP50-203ENST00000407019 SRGAP2BP0DMP2 458 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 NMBRP28336 390 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 ARRB2P32121 409 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 GCKP35557 465 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 ABCG1P45844 678 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 IDH3AP50213 366 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 SESN3P58005 492 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 TSNAXIP1Q2TAA8 658 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 CMPK2Q5EBM0 449 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 KLHDC8BQ8IXV7 354 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 CNTD1Q8N815 330 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 OR6Y1Q8NGX8 325 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 HASPINQ8TF76 798 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 SREK1Q8WXA9 508 aaKnown RBP17.16■□□□□ 0.34
NUP50-203ENST00000407019 VPS39Q96JC1 886 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 NSMCE4AQ9NXX6 385 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 PADI3Q9ULW8 664 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 NEU3Q9UQ49 428 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 PCDHB12Q9Y5F1 795 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 M0QZQ0 153 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 IRAK2O43187 625 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 CACNG3O60359 315 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 MGEA5O60502 916 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 C2P06681 752 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 MYL4P12829 197 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 CCNCP24863 283 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 CD52P31358 61 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 VHLP40337 213 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 IRF9Q00978 393 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 GRIK3Q13003 919 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 THOC5Q13769 683 aaKnown RBP17.15■□□□□ 0.34
NUP50-203ENST00000407019 MAPRE1Q15691 268 aaKnown RBP17.15■□□□□ 0.34
NUP50-203ENST00000407019 DLG2Q15700 870 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 PDPK2PQ6A1A2 396 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 CD300LGQ6UXG3 332 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 OTOP3Q7RTS5 596 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 NET1Q7Z628 596 aaPredicted RBP17.15■□□□□ 0.34
NUP50-203ENST00000407019 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 ATPAF2Q8N5M1 289 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 OR10T2Q8NGX3 314 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 TMEM209Q96SK2 561 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 MCMBPQ9BTE3 642 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 KIFC1Q9BW19 673 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 SIK2Q9H0K1 926 aa17.15■□□□□ 0.34
NUP50-203ENST00000407019 AAR2Q9Y312 384 aaKnown RBP17.15■□□□□ 0.34
NUP50-203ENST00000407019 SIN3BO75182 1162 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 CYBAP13498 195 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 THPOP40225 353 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 HADHAP40939 763 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 SLC34A1Q06495 639 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 EIF4EBP2Q13542 120 aaPredicted RBP17.14■□□□□ 0.33
NUP50-203ENST00000407019 BRMS1LQ5PSV4 323 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 C6orf163Q5TEZ5 329 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 ULK2Q8IYT8 1036 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 SCAMP5Q8TAC9 235 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 HAPLN3Q96S86 360 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 THTPAQ9BU02 230 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
NUP50-203ENST00000407019 SPC25Q9HBM1 224 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 MID2Q9UJV3 735 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 CDY1Q9Y6F8 540 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 TMEM114B3SHH9 223 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 F8W8V4 182 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 G3V2L1 256 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 H2AFYO75367 372 aaKnown RBP17.14■□□□□ 0.33
NUP50-203ENST00000407019 ATP6V1C1P21283 382 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 PAX3P23760 479 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 TSPY1Q01534 308 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 TUSC3Q13454 348 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 MUM1Q2TAK8 710 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 ANO4Q32M45 955 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 TRMT5Q32P41 509 aaKnown RBP17.14■□□□□ 0.33
NUP50-203ENST00000407019 OVOS1Q6IE37 1185 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 ARHGAP36Q6ZRI8 547 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 LRRTM3Q86VH5 581 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 IFNL1Q8IU54 200 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 ARHGAP12Q8IWW6 846 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 DNAJC9Q8WXX5 260 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 RSPH1Q8WYR4 309 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 TBL1YQ9BQ87 522 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 RRAGCQ9HB90 399 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 NMRAL1Q9HBL8 299 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 STX18Q9P2W9 335 aaKnown RBP17.14■□□□□ 0.33
NUP50-203ENST00000407019 INPP5FQ9Y2H2 1132 aa17.14■□□□□ 0.33
NUP50-203ENST00000407019 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 ZNF195O14628 629 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 NVLO15381 856 aaKnown RBP17.13■□□□□ 0.33
NUP50-203ENST00000407019 FGF10O15520 208 aaPredicted RBP17.13■□□□□ 0.33
NUP50-203ENST00000407019 HSPA4LO95757 839 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms