RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 GALNT3Q14435 633 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 TEAD4Q15561 434 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 ATAD3BQ5T9A4 648 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 MFSD7Q6UXD7 560 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 LRRC52Q8N7C0 313 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 CMTM5Q96DZ9 223 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 TSPAN18Q96SJ8 248 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 ACP6Q9NPH0 428 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 RAD54BQ9Y620 910 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 RPA3P35244 121 aaPredicted RBP19.58■□□□□ 0.72
LSM11-201ENST00000286307 AASDHQ4L235 1098 aaPredicted RBP19.58■□□□□ 0.72
LSM11-201ENST00000286307 ARMC7Q9H6L4 198 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.58■□□□□ 0.72
LSM11-201ENST00000286307 PCDHGA4Q9Y5G9 962 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 TSPAN1O60635 241 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 PCCBP05166 539 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 ZNF135P52742 658 aaPredicted RBP19.58■□□□□ 0.72
LSM11-201ENST00000286307 HTRA3P83110 453 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 VN1R5Q7Z5H4 357 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 TADA1Q96BN2 335 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 VPS50Q96JG6 964 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 WHRNQ9P202 907 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 DERAQ9Y315 318 aa19.58■□□□□ 0.72
LSM11-201ENST00000286307 FMN2Q9NZ56 1722 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 MT-CO1P00395 513 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 METTL3Q86U44 580 aaKnown RBP19.57■□□□□ 0.72
LSM11-201ENST00000286307 PARVBQ9HBI1 364 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 MYO1CO00159 1063 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 CCNE2O96020 404 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 RBL1P28749 1068 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 SPANXN3Q5MJ09 141 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 SEMA3CQ99985 751 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 UNC93B1Q9H1C4 597 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 PGAM1P18669 254 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 TRIM60Q495X7 471 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 XPO1O14980 1071 aaKnown RBP19.57■□□□□ 0.72
LSM11-201ENST00000286307 RASGRP1O95267 797 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 CCNB1P14635 433 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 MRPS5P82675 430 aaKnown RBP19.57■□□□□ 0.72
LSM11-201ENST00000286307 SLC22A9Q8IVM8 553 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 PAFAH2Q99487 392 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 GNPTGQ9UJJ9 305 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 AGO1Q9UL18 857 aaKnown RBP19.57■□□□□ 0.72
LSM11-201ENST00000286307 INSL6Q9Y581 213 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 CAPN6Q9Y6Q1 641 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 ACAP1Q15027 740 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 ARHGAP20Q9P2F6 1191 aa19.57■□□□□ 0.72
LSM11-201ENST00000286307 TRBV23OR9-2A0A075B6M9 112 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 NR5A2O00482 541 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 FSBPO95073 299 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 PIRTP0C851 137 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 ABRQ12979 859 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 NAA30Q147X3 362 aaPredicted RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 CLEC17AQ6ZS10 378 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 ARID3BQ8IVW6 561 aaPredicted RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 KCNF1Q9H3M0 494 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 ARL2BPQ9Y2Y0 163 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 PSMB4P28070 264 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 TKTP29401 623 aaKnown RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 SERPINB4P48594 390 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 SPIDRQ14159 915 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 ATP6AP1LQ52LC2 224 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 CCNI2Q6ZMN8 369 aaPredicted RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 MILR1Q7Z6M3 343 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 SLC25A14O95258 325 aaPredicted RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 DGKAP23743 735 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 PKN2Q16513 984 aaKnown RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 STK40Q8N2I9 435 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 FBXL16Q8N461 479 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 ENTPD4Q9Y227 616 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 SIGLEC16A6NMB1 481 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 CATP04040 527 aaKnown RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 CFIP05156 583 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 FAM9CQ8IZT9 166 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.56■□□□□ 0.72
LSM11-201ENST00000286307 THTPAQ9BU02 230 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 PIF1Q9H611 641 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 SLC35G4P0C7Q5 338 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 OVGP1Q12889 678 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 ZCCHC8Q6NZY4 707 aaKnown RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 DSELQ8IZU8 1212 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 CASKIN2Q8WXE0 1202 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 AUTS2Q8WXX7 1259 aa19.56■□□□□ 0.72
LSM11-201ENST00000286307 POLMQ9NP87 494 aaPredicted RBP19.56■□□□□ 0.72
LSM11-201ENST00000286307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.56■□□□□ 0.72
LSM11-201ENST00000286307 A0A0B4J269 797 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 PPP2R1BP30154 601 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 PBX3P40426 434 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 CNKSR3Q6P9H4 555 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 GANQ9H2C0 597 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 ASTN1O14525 1302 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 MPOP05164 745 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 ANXA5P08758 320 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 GRTP1Q5TC63 336 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 OXCT2Q9BYC2 517 aaPredicted RBP19.55■□□□□ 0.72
LSM11-201ENST00000286307 TRIM4Q9C037 500 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 PDZD7Q9H5P4 517 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 PCDH9Q9HC56 1237 aa19.55■□□□□ 0.72
LSM11-201ENST00000286307 SLC27A6Q9Y2P4 619 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms