RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 POL5P39985 1022 aaKnown RBP1.26□□□□□ -2.21
snR38snR38 ATF1P40353 525 aa1.26□□□□□ -2.21
snR38snR38 OYE3P41816 400 aaPredicted RBP1.26□□□□□ -2.21
snR38snR38 FOL2P51601 243 aaKnown RBP1.26□□□□□ -2.21
snR38snR38 SNO2P53823 222 aa1.26□□□□□ -2.21
snR38snR38 YDJ1P25491 409 aaKnown RBP1.25□□□□□ -2.21
snR38snR38 YJL181WP46987 611 aa1.25□□□□□ -2.21
snR38snR38 KIP3P53086 805 aaKnown RBP1.25□□□□□ -2.21
snR38snR38 SSY1Q03770 852 aa1.25□□□□□ -2.21
snR38snR38 TRE1Q08919 783 aa1.25□□□□□ -2.21
snR38snR38 YOR223WQ12015 292 aa1.25□□□□□ -2.21
snR38snR38 ITC1P53125 1264 aa1.24□□□□□ -2.21
snR38snR38 YOR352WQ08816 343 aa1.24□□□□□ -2.21
snR38snR38 YLL054CQ12244 843 aa1.24□□□□□ -2.21
snR38snR38 PRO1P32264 428 aa1.23□□□□□ -2.21
snR38snR38 NTH2P35172 780 aa1.23□□□□□ -2.21
snR38snR38 INP51P40559 946 aaKnown RBP1.23□□□□□ -2.21
snR38snR38 AIM21P40563 679 aa1.23□□□□□ -2.21
snR38snR38 PPT1P53043 513 aa1.23□□□□□ -2.21
snR38snR38 SLI1P53304 468 aa1.23□□□□□ -2.21
snR38snR38 CYT1P07143 309 aa1.22□□□□□ -2.21
snR38snR38 PMI40P29952 429 aaKnown RBP1.22□□□□□ -2.21
snR38snR38 CUE2P36075 443 aaKnown RBP1.22□□□□□ -2.21
snR38snR38 LGE1Q02796 332 aaKnown RBP1.22□□□□□ -2.21
snR38snR38 YMR074CQ04773 145 aa1.22□□□□□ -2.21
snR38snR38 LPX1Q12405 387 aaKnown RBP1.22□□□□□ -2.21
snR38snR38 ERS1P17261 260 aa1.21□□□□□ -2.22
snR38snR38 HCM1P25364 564 aa1.21□□□□□ -2.22
snR38snR38 GPT2P36148 743 aa1.21□□□□□ -2.22
snR38snR38 YBR287WP38355 427 aa1.21□□□□□ -2.22
snR38snR38 ETP1P38748 585 aaKnown RBP1.21□□□□□ -2.22
snR38snR38 QDR2P40474 542 aa1.21□□□□□ -2.22
snR38snR38 UBA2P52488 636 aa1.21□□□□□ -2.22
snR38snR38 SUN4P53616 420 aa1.21□□□□□ -2.22
snR38snR38 YNR021WP53723 404 aaKnown RBP1.21□□□□□ -2.22
snR38snR38 YAP7Q08182 245 aa1.21□□□□□ -2.22
snR38snR38 YOR296WQ08748 1289 aa1.21□□□□□ -2.22
snR38snR38 SOG2Q08817 791 aa1.21□□□□□ -2.22
snR38snR38 AFT2Q08957 416 aa1.21□□□□□ -2.22
snR38snR38 YDL177CQ12257 170 aa1.21□□□□□ -2.22
snR38snR38 GLC3P32775 704 aa1.2□□□□□ -2.22
snR38snR38 GIP1P38229 639 aa1.2□□□□□ -2.22
snR38snR38 NEO1P40527 1151 aa1.2□□□□□ -2.22
snR38snR38 BIO5P53744 561 aaKnown RBP1.2□□□□□ -2.22
snR38snR38 RPS4AP0CX35 261 aaKnown RBP1.19□□□□□ -2.22
snR38snR38 RPS4BP0CX36 261 aaKnown RBP1.19□□□□□ -2.22
snR38snR38 SRS2P12954 1174 aa1.19□□□□□ -2.22
snR38snR38 DYS1P38791 387 aa1.19□□□□□ -2.22
snR38snR38 PTC7P38797 343 aa1.19□□□□□ -2.22
snR38snR38 SEC5P89102 971 aa1.19□□□□□ -2.22
snR38snR38 PPM2Q08282 695 aa1.19□□□□□ -2.22
snR38snR38 AIM7Q12156 149 aa1.19□□□□□ -2.22
snR38snR38 ICT1Q12385 394 aa1.19□□□□□ -2.22
snR38snR38 ISW1P38144 1129 aa1.18□□□□□ -2.22
snR38snR38 SPT20P50875 604 aa1.18□□□□□ -2.22
snR38snR38 DOT1Q04089 582 aaKnown RBP1.18□□□□□ -2.22
snR38snR38 TSC13Q99190 310 aa1.18□□□□□ -2.22
snR38snR38 FUS1P11710 512 aa1.17□□□□□ -2.22
snR38snR38 PDI1P17967 522 aaKnown RBP1.17□□□□□ -2.22
snR38snR38 OAR1P35731 278 aa1.17□□□□□ -2.22
snR38snR38 BOI1P38041 980 aaKnown RBP1.17□□□□□ -2.22
snR38snR38 PEX7P39108 375 aa1.17□□□□□ -2.22
snR38snR38 YIL165CP40446 119 aa1.17□□□□□ -2.22
snR38snR38 GTS1P40956 396 aa1.17□□□□□ -2.22
snR38snR38 STU2P46675 888 aa1.17□□□□□ -2.22
snR38snR38 ENV11P53246 860 aa1.17□□□□□ -2.22
snR38snR38 HOF1Q05080 669 aa1.17□□□□□ -2.22
snR38snR38 YVC1Q12324 675 aa1.17□□□□□ -2.22
snR38snR38 STE11P23561 717 aa1.16□□□□□ -2.22
snR38snR38 PUF4P25339 888 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
snR38snR38 CHS7P38843 316 aa1.16□□□□□ -2.22
snR38snR38 YER158CP40095 573 aa1.16□□□□□ -2.22
snR38snR38 ALT1P52893 592 aa1.16□□□□□ -2.22
snR38snR38 NTO1Q12311 748 aa1.16□□□□□ -2.22
snR38snR38 YBL036CP38197 257 aa1.15□□□□□ -2.23
snR38snR38 HXT5P38695 592 aa1.15□□□□□ -2.23
snR38snR38 MNN10P50108 393 aaKnown RBP1.15□□□□□ -2.23
snR38snR38 UBP1P25037 809 aa1.14□□□□□ -2.23
snR38snR38 TFA2P36145 328 aa1.14□□□□□ -2.23
snR38snR38 LDH1P38139 375 aa1.14□□□□□ -2.23
snR38snR38 FET4P40988 552 aa1.14□□□□□ -2.23
snR38snR38 SCS3P53012 380 aa1.14□□□□□ -2.23
snR38snR38 ALD3P54114 506 aa1.14□□□□□ -2.23
snR38snR38 NDJ1Q12366 352 aa1.14□□□□□ -2.23
snR38snR38 TMT1P32643 299 aa1.13□□□□□ -2.23
snR38snR38 RGT1P32862 1170 aa1.13□□□□□ -2.23
snR38snR38 DOM34P33309 386 aa1.13□□□□□ -2.23
snR38snR38 MOH1P38191 138 aa1.13□□□□□ -2.23
snR38snR38 BSD2P38356 321 aa1.13□□□□□ -2.23
snR38snR38 MSH4P40965 878 aaPredicted RBP1.13□□□□□ -2.23
snR38snR38 GCV1P48015 400 aa1.13□□□□□ -2.23
snR38snR38 CWH41P53008 833 aa1.13□□□□□ -2.23
snR38snR38 MCM6P53091 1017 aaKnown RBP1.13□□□□□ -2.23
snR38snR38 GCN5Q03330 439 aa1.13□□□□□ -2.23
snR38snR38 HAS1Q03532 505 aaKnown RBP1.13□□□□□ -2.23
snR38snR38 YDR132CQ03900 495 aa1.13□□□□□ -2.23
snR38snR38 SGD1Q06132 899 aa1.13□□□□□ -2.23
snR38snR38 NOP1P15646 327 aaKnown RBP1.12□□□□□ -2.23
snR38snR38 YJR124CP47159 448 aa1.12□□□□□ -2.23
snR38snR38 SMY2P32909 740 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms