RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RPL19AP0CX82 189 aaKnown RBP9.67□□□□□ -0.86
SRP54YPR088C RPL19BP0CX83 189 aaPredicted RBP9.67□□□□□ -0.86
SRP54YPR088C FBP26P32604 452 aa9.67□□□□□ -0.86
SRP54YPR088C SIS2P36024 562 aa9.67□□□□□ -0.86
SRP54YPR088C NSG2P53898 299 aa9.67□□□□□ -0.86
SRP54YPR088C UFD2P54860 961 aa9.67□□□□□ -0.86
SRP54YPR088C ECM23Q02710 187 aa9.67□□□□□ -0.86
SRP54YPR088C MRD1Q06106 887 aaKnown RBP9.67□□□□□ -0.86
SRP54YPR088C YPL260WQ08977 551 aa9.67□□□□□ -0.86
SRP54YPR088C SSA1P10591 642 aaKnown RBP9.66□□□□□ -0.86
SRP54YPR088C YKE2P52553 114 aa9.66□□□□□ -0.86
SRP54YPR088C EST2Q06163 884 aa9.66□□□□□ -0.86
SRP54YPR088C TSR3Q12094 313 aaKnown RBP9.66□□□□□ -0.86
SRP54YPR088C MATALPHA2P0CY08 210 aa9.65□□□□□ -0.86
SRP54YPR088C HMLALPHA2P0CY09 210 aa9.65□□□□□ -0.86
SRP54YPR088C YHL050CP38721 697 aa9.65□□□□□ -0.86
SRP54YPR088C YJL171CP46992 396 aa9.65□□□□□ -0.86
SRP54YPR088C PSK2Q08217 1101 aa9.65□□□□□ -0.86
SRP54YPR088C BIK1P11709 440 aa9.64□□□□□ -0.87
SRP54YPR088C CTF18P49956 741 aa9.64□□□□□ -0.87
SRP54YPR088C SEN54Q02825 467 aaPredicted RBP9.64□□□□□ -0.87
SRP54YPR088C RAD61Q99359 647 aa9.64□□□□□ -0.87
SRP54YPR088C TTI1P36097 1038 aa9.64□□□□□ -0.87
SRP54YPR088C YHL017WP38745 532 aa9.64□□□□□ -0.87
SRP54YPR088C DJP1P40564 432 aa9.64□□□□□ -0.87
SRP54YPR088C TRM44Q02648 567 aaKnown RBP9.64□□□□□ -0.87
SRP54YPR088C KEL3Q08979 651 aaPredicted RBP9.64□□□□□ -0.87
SRP54YPR088C ANP1P32629 500 aa9.63□□□□□ -0.87
SRP54YPR088C GLC3P32775 704 aa9.63□□□□□ -0.87
SRP54YPR088C MYO3P36006 1272 aa9.63□□□□□ -0.87
SRP54YPR088C PCL8Q08966 492 aa9.63□□□□□ -0.87
SRP54YPR088C SLI15P38283 698 aa9.62□□□□□ -0.87
SRP54YPR088C BDH2P39713 417 aa9.62□□□□□ -0.87
SRP54YPR088C UTP7P40055 554 aaKnown RBP9.62□□□□□ -0.87
SRP54YPR088C VID27P40157 782 aa9.62□□□□□ -0.87
SRP54YPR088C MSH4P40965 878 aaPredicted RBP9.62□□□□□ -0.87
SRP54YPR088C MTC3P53077 123 aa9.62□□□□□ -0.87
SRP54YPR088C HRQ1Q05549 1077 aa9.62□□□□□ -0.87
SRP54YPR088C MPH3P0CE00 602 aa9.61□□□□□ -0.87
SRP54YPR088C STV1P37296 890 aa9.61□□□□□ -0.87
SRP54YPR088C VPS4P52917 437 aa9.61□□□□□ -0.87
SRP54YPR088C UBP10P53874 792 aaPredicted RBP9.61□□□□□ -0.87
SRP54YPR088C TIM50Q02776 476 aa9.61□□□□□ -0.87
SRP54YPR088C AAD16Q02895 342 aa9.61□□□□□ -0.87
SRP54YPR088C TFC6Q06339 672 aa9.61□□□□□ -0.87
SRP54YPR088C ELG1Q12050 791 aa9.61□□□□□ -0.87
SRP54YPR088C GAP1P19145 602 aaPredicted RBP9.6□□□□□ -0.87
SRP54YPR088C MSP1P28737 362 aa9.6□□□□□ -0.87
SRP54YPR088C GSC2P40989 1895 aa9.6□□□□□ -0.87
SRP54YPR088C PTK2P47116 818 aaKnown RBP9.6□□□□□ -0.87
SRP54YPR088C HST1P53685 503 aa9.6□□□□□ -0.87
SRP54YPR088C HDA1P53973 706 aa9.6□□□□□ -0.87
SRP54YPR088C YLR407WQ06070 228 aa9.6□□□□□ -0.87
SRP54YPR088C YPL150WQ12152 901 aa9.6□□□□□ -0.87
SRP54YPR088C PFK2P16862 959 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
SRP54YPR088C RIT1P23796 513 aa9.6□□□□□ -0.87
SRP54YPR088C FET4P40988 552 aa9.6□□□□□ -0.87
SRP54YPR088C PEX14P53112 341 aa9.6□□□□□ -0.87
SRP54YPR088C YGR117CP53270 476 aa9.6□□□□□ -0.87
SRP54YPR088C CPA2P03965 1118 aaKnown RBP9.59□□□□□ -0.87
SRP54YPR088C MAK31P23059 88 aa9.59□□□□□ -0.87
SRP54YPR088C ROX1P25042 368 aa9.59□□□□□ -0.87
SRP54YPR088C PRX1P34227 261 aaKnown RBP9.59□□□□□ -0.87
SRP54YPR088C SNF7P39929 240 aaKnown RBP9.59□□□□□ -0.87
SRP54YPR088C HYR1P40581 163 aaKnown RBP9.59□□□□□ -0.87
SRP54YPR088C BUD6P41697 788 aa9.59□□□□□ -0.87
SRP54YPR088C EPL1P43572 832 aa9.59□□□□□ -0.87
SRP54YPR088C ALG2P43636 503 aa9.59□□□□□ -0.87
SRP54YPR088C ENT3P47160 408 aa9.59□□□□□ -0.87
SRP54YPR088C HAP5Q02516 242 aa9.59□□□□□ -0.87
SRP54YPR088C PRE8P23639 250 aa9.58□□□□□ -0.88
SRP54YPR088C AKR1P39010 764 aa9.58□□□□□ -0.88
SRP54YPR088C VPS8P39702 1274 aa9.58□□□□□ -0.88
SRP54YPR088C YGL081WP53156 320 aa9.58□□□□□ -0.88
SRP54YPR088C YLR278CQ05854 1341 aa9.57□□□□□ -0.88
SRP54YPR088C HPR1P17629 752 aaKnown RBP9.57□□□□□ -0.88
SRP54YPR088C ADP1P25371 1049 aa9.57□□□□□ -0.88
SRP54YPR088C PRO3P32263 286 aaKnown RBP9.57□□□□□ -0.88
SRP54YPR088C RTG2P32608 588 aaKnown RBP9.57□□□□□ -0.88
SRP54YPR088C MAL31P38156 614 aa9.57□□□□□ -0.88
SRP54YPR088C MYO5Q04439 1219 aaKnown RBP9.57□□□□□ -0.88
SRP54YPR088C COG8Q04632 607 aa9.57□□□□□ -0.88
SRP54YPR088C ISW2Q08773 1120 aa9.57□□□□□ -0.88
SRP54YPR088C KIN1P13185 1064 aa9.56□□□□□ -0.88
SRP54YPR088C SRM1P21827 482 aa9.56□□□□□ -0.88
SRP54YPR088C BMH2P34730 273 aaKnown RBP9.56□□□□□ -0.88
SRP54YPR088C RPT6Q01939 405 aaKnown RBP9.56□□□□□ -0.88
SRP54YPR088C THS1P04801 734 aaKnown RBP9.56□□□□□ -0.88
SRP54YPR088C CBP3P21560 335 aa9.56□□□□□ -0.88
SRP54YPR088C RFC5P38251 354 aa9.56□□□□□ -0.88
SRP54YPR088C EMP47P43555 445 aa9.56□□□□□ -0.88
SRP54YPR088C SKG3Q06315 1026 aa9.56□□□□□ -0.88
SRP54YPR088C YDL124WQ07551 312 aaKnown RBP9.56□□□□□ -0.88
SRP54YPR088C AIM7Q12156 149 aa9.56□□□□□ -0.88
SRP54YPR088C PMA1P05030 918 aaKnown RBP9.55□□□□□ -0.88
SRP54YPR088C CBP1P07252 654 aa9.55□□□□□ -0.88
SRP54YPR088C DIT2P21595 489 aa9.55□□□□□ -0.88
SRP54YPR088C RAD53P22216 821 aa9.55□□□□□ -0.88
SRP54YPR088C YBL028CP38202 106 aa9.55□□□□□ -0.88
SRP54YPR088C PES4P39684 611 aa9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms