RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG11	YPR049C	YML082W	Q04533	649 aa	Known RBP	3.16	□□□□□ -1.9
ATG11	YPR049C	ISR1	Q06098	443 aa	Known RBP	3.16	□□□□□ -1.9
ATG11	YPR049C	PDI1	P17967	522 aa	Known RBP	3.15	□□□□□ -1.9
ATG11	YPR049C	VAN1	P23642	535 aa		3.15	□□□□□ -1.9
ATG11	YPR049C	SPT5	P27692	1063 aa	Known RBP	3.15	□□□□□ -1.9
ATG11	YPR049C	AIM21	P40563	679 aa		3.15	□□□□□ -1.9
ATG11	YPR049C	CTF4	Q01454	927 aa		3.15	□□□□□ -1.9
ATG11	YPR049C	ECM29	P38737	1868 aa		3.15	□□□□□ -1.9
ATG11	YPR049C	UTP7	P40055	554 aa	Known RBP	3.15	□□□□□ -1.91
ATG11	YPR049C	GRX6	Q12438	231 aa		3.15	□□□□□ -1.91
ATG11	YPR049C	PDC1	P06169	563 aa	Known RBP	3.14	□□□□□ -1.91
ATG11	YPR049C	YDJ1	P25491	409 aa	Known RBP	3.14	□□□□□ -1.91
ATG11	YPR049C	SMY1	P32364	656 aa	Known RBP	3.14	□□□□□ -1.91
ATG11	YPR049C	BSD2	P38356	321 aa		3.14	□□□□□ -1.91
ATG11	YPR049C	PEA2	P40091	420 aa		3.14	□□□□□ -1.91
ATG11	YPR049C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
ATG11	YPR049C	CLA4	P48562	842 aa		3.14	□□□□□ -1.91
ATG11	YPR049C	MCM16	Q12262	181 aa		3.14	□□□□□ -1.91
ATG11	YPR049C	RAS1	P01119	309 aa		3.14	□□□□□ -1.91
ATG11	YPR049C	OSM1	P21375	501 aa	Known RBP	3.14	□□□□□ -1.91
ATG11	YPR049C	CSE4	P36012	229 aa		3.14	□□□□□ -1.91
ATG11	YPR049C	DIB1	Q06819	143 aa	Predicted RBP	3.14	□□□□□ -1.91
ATG11	YPR049C	PAF1	P38351	445 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	LSC2	P53312	427 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	TAP42	Q04372	366 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	ECM30	Q06673	1274 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	PHM7	Q12252	991 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	TUS1	Q06412	1307 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	RIF1	P29539	1916 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	MDG1	P53885	366 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	YPR097W	Q06839	1073 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	PUN1	Q06991	263 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	FKS1	P38631	1876 aa	Known RBP	3.13	□□□□□ -1.91
ATG11	YPR049C	CDC4	P07834	779 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	TIF1	P10081	395 aa	Known RBP	3.13	□□□□□ -1.91
ATG11	YPR049C	TIM50	Q02776	476 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	YDR034W-B	Q6Q5X2	51 aa		3.13	□□□□□ -1.91
ATG11	YPR049C	SLD2	P34252	453 aa		3.12	□□□□□ -1.91
ATG11	YPR049C	CST6	P40535	587 aa		3.12	□□□□□ -1.91
ATG11	YPR049C	RPS24A	P0CX31	135 aa	Known RBP	3.12	□□□□□ -1.91
ATG11	YPR049C	RPS24B	P0CX32	135 aa	Known RBP	3.12	□□□□□ -1.91
ATG11	YPR049C	YGR117C	P53270	476 aa		3.12	□□□□□ -1.91
ATG11	YPR049C	WHI3	P34761	661 aa	Known RBP	3.11	□□□□□ -1.91
ATG11	YPR049C	RRT14	P40470	206 aa		3.11	□□□□□ -1.91
ATG11	YPR049C	TRS33	Q99394	268 aa		3.11	□□□□□ -1.91
ATG11	YPR049C	ENO1	P00924	437 aa	Known RBP	3.1	□□□□□ -1.91
ATG11	YPR049C	BIO2	P32451	375 aa		3.1	□□□□□ -1.91
ATG11	YPR049C	RRT6	P53117	311 aa	Predicted RBP	3.1	□□□□□ -1.91
ATG11	YPR049C	RAT1	Q02792	1006 aa	Known RBP	3.1	□□□□□ -1.91
ATG11	YPR049C	YPR015C	Q12531	247 aa		3.1	□□□□□ -1.91
ATG11	YPR049C	ENO2	P00925	437 aa	Known RBP	3.1	□□□□□ -1.91
ATG11	YPR049C	APE3	P37302	537 aa	Known RBP	3.1	□□□□□ -1.91
ATG11	YPR049C	MAK16	P10962	306 aa	Predicted RBP	3.09	□□□□□ -1.91
ATG11	YPR049C	KTR1	P27810	393 aa	Known RBP	3.09	□□□□□ -1.91
ATG11	YPR049C	HED1	Q03937	162 aa		3.09	□□□□□ -1.91
ATG11	YPR049C	CSR2	Q12734	1121 aa		3.09	□□□□□ -1.91
ATG11	YPR049C	FIR1	P40020	876 aa		3.09	□□□□□ -1.91
ATG11	YPR049C	FIG4	P42837	879 aa		3.09	□□□□□ -1.91
ATG11	YPR049C	YMR265C	Q03508	461 aa	Known RBP	3.09	□□□□□ -1.91
ATG11	YPR049C	ADR1	P07248	1323 aa		3.09	□□□□□ -1.92
ATG11	YPR049C	THS1	P04801	734 aa	Known RBP	3.09	□□□□□ -1.92
ATG11	YPR049C	YBR287W	P38355	427 aa		3.09	□□□□□ -1.92
ATG11	YPR049C	SCW11	P53189	542 aa		3.09	□□□□□ -1.92
ATG11	YPR049C	FLO11	P08640	1367 aa		3.08	□□□□□ -1.92
ATG11	YPR049C	FET4	P40988	552 aa		3.08	□□□□□ -1.92
ATG11	YPR049C	AIR1	P40507	360 aa	Known RBP	3.07	□□□□□ -1.92
ATG11	YPR049C	YNR014W	P53719	212 aa		3.07	□□□□□ -1.92
ATG11	YPR049C	RRN6	P32786	894 aa		3.07	□□□□□ -1.92
ATG11	YPR049C	YJR115W	P47152	169 aa		3.07	□□□□□ -1.92
ATG11	YPR049C	KAR5	Q04746	504 aa		3.07	□□□□□ -1.92
ATG11	YPR049C	SPE2	P21182	396 aa		3.07	□□□□□ -1.92
ATG11	YPR049C	GRX4	P32642	244 aa		3.07	□□□□□ -1.92
ATG11	YPR049C	SIS2	P36024	562 aa		3.07	□□□□□ -1.92
ATG11	YPR049C	PTK2	P47116	818 aa	Known RBP	3.07	□□□□□ -1.92
ATG11	YPR049C	CWC15	Q03772	175 aa	Known RBP	3.07	□□□□□ -1.92
ATG11	YPR049C	FUR4	P05316	633 aa	Known RBP	3.06	□□□□□ -1.92
ATG11	YPR049C	CYT1	P07143	309 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	YKU70	P32807	602 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	NTH2	P35172	780 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	RSC30	P38781	883 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	MTO1	P53070	669 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	ATG13	Q06628	738 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	GAP1	P19145	602 aa	Predicted RBP	3.06	□□□□□ -1.92
ATG11	YPR049C	SUT1	P53032	299 aa	Known RBP	3.06	□□□□□ -1.92
ATG11	YPR049C	IOC4	Q04213	475 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-DR4	O74302	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-H	P0C2I4	478 aa	Known RBP	3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-A	P0CX57	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-PR1	P0CX58	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-OR	P0CX59	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-PR2	P0CX60	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-DR5	P0CX65	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-ER2	P0CX66	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-GR3	P0CX67	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-LR1	P0CX68	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-MR2	P0CX69	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	GRS1	P38088	690 aa	Known RBP	3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-JR2	P47099	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	TY1A-DR1	Q03856	440 aa		3.06	□□□□□ -1.92
ATG11	YPR049C	SYF1	Q04048	859 aa	Predicted RBP	3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms