RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W SSA1P10591 642 aaKnown RBP8.08□□□□□ -1.12
VPS28YPL065W IRS4P36115 615 aaKnown RBP8.08□□□□□ -1.12
VPS28YPL065W RPL34AP87262 121 aaPredicted RBP8.08□□□□□ -1.12
VPS28YPL065W TY1A-NL1Q12391 440 aaKnown RBP8.08□□□□□ -1.12
VPS28YPL065W ALO1P54783 526 aaKnown RBP8.07□□□□□ -1.12
VPS28YPL065W RPB10P22139 70 aa8.06□□□□□ -1.12
VPS28YPL065W KTR2P33550 425 aa8.06□□□□□ -1.12
VPS28YPL065W KAE1P36132 386 aa8.06□□□□□ -1.12
VPS28YPL065W PAN5P38787 379 aa8.06□□□□□ -1.12
VPS28YPL065W OMA1P36163 345 aa8.05□□□□□ -1.12
VPS28YPL065W PSY2P40164 858 aa8.05□□□□□ -1.12
VPS28YPL065W ALD3P54114 506 aa8.05□□□□□ -1.12
VPS28YPL065W TIF6Q12522 245 aaKnown RBP8.05□□□□□ -1.12
VPS28YPL065W BOL3P39724 118 aa8.04□□□□□ -1.12
VPS28YPL065W SPO71Q03868 1245 aa8.04□□□□□ -1.12
VPS28YPL065W GEF1P37020 779 aa8.03□□□□□ -1.12
VPS28YPL065W MAE1P36013 669 aaKnown RBP8.02□□□□□ -1.13
VPS28YPL065W TFA2P36145 328 aa8.02□□□□□ -1.13
VPS28YPL065W SAF1P38352 637 aa8.02□□□□□ -1.13
VPS28YPL065W MED7Q08278 222 aa8.02□□□□□ -1.13
VPS28YPL065W INP52P50942 1183 aa8.01□□□□□ -1.13
VPS28YPL065W CHS2P14180 963 aa8□□□□□ -1.13
VPS28YPL065W POL5P39985 1022 aaKnown RBP8□□□□□ -1.13
VPS28YPL065W NEO1P40527 1151 aa8□□□□□ -1.13
VPS28YPL065W KAR5Q04746 504 aa8□□□□□ -1.13
VPS28YPL065W YLR122CQ12312 125 aa8□□□□□ -1.13
VPS28YPL065W YJR124CP47159 448 aa7.99□□□□□ -1.13
VPS28YPL065W UFD2P54860 961 aa7.99□□□□□ -1.13
VPS28YPL065W REC8Q12188 680 aa7.99□□□□□ -1.13
VPS28YPL065W GLO3P38682 493 aaKnown RBP7.97□□□□□ -1.13
VPS28YPL065W YNR065CP53751 1116 aa7.97□□□□□ -1.13
VPS28YPL065W ELG1Q12050 791 aa7.97□□□□□ -1.13
VPS28YPL065W PYC2P32327 1180 aaKnown RBP7.96□□□□□ -1.14
VPS28YPL065W AKR1P39010 764 aa7.96□□□□□ -1.14
VPS28YPL065W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
VPS28YPL065W GLO4Q12320 285 aa7.96□□□□□ -1.14
VPS28YPL065W FET4P40988 552 aa7.95□□□□□ -1.14
VPS28YPL065W FAR11P53917 953 aa7.95□□□□□ -1.14
VPS28YPL065W HVG1P0CE11 249 aa7.94□□□□□ -1.14
VPS28YPL065W QDR1P40475 563 aa7.94□□□□□ -1.14
VPS28YPL065W ATG1P53104 897 aa7.94□□□□□ -1.14
VPS28YPL065W TRP3P00937 484 aa7.93□□□□□ -1.14
VPS28YPL065W NAM7P30771 971 aaKnown RBP7.93□□□□□ -1.14
VPS28YPL065W ECM2P38241 364 aaKnown RBP7.93□□□□□ -1.14
VPS28YPL065W NCE103P53615 221 aa7.93□□□□□ -1.14
VPS28YPL065W HAS1Q03532 505 aaKnown RBP7.93□□□□□ -1.14
VPS28YPL065W YKR073CP36153 106 aa7.92□□□□□ -1.14
VPS28YPL065W YGR130CP53278 816 aa7.92□□□□□ -1.14
VPS28YPL065W TOS1P38288 455 aa7.91□□□□□ -1.14
VPS28YPL065W ACF4P47129 309 aa7.91□□□□□ -1.14
VPS28YPL065W RSC4Q02206 625 aa7.91□□□□□ -1.14
VPS28YPL065W YLL054CQ12244 843 aa7.91□□□□□ -1.14
VPS28YPL065W LIP5P32875 414 aa7.9□□□□□ -1.14
VPS28YPL065W SPO74P45819 413 aa7.9□□□□□ -1.14
VPS28YPL065W ERS1P17261 260 aa7.89□□□□□ -1.15
VPS28YPL065W MSB1P21339 1137 aaKnown RBP7.89□□□□□ -1.15
VPS28YPL065W PUB1P32588 453 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
VPS28YPL065W KIP3P53086 805 aaKnown RBP7.88□□□□□ -1.15
VPS28YPL065W YML020WQ03722 664 aa7.88□□□□□ -1.15
VPS28YPL065W CYC7P00045 113 aa7.87□□□□□ -1.15
VPS28YPL065W CTR9P89105 1077 aa7.87□□□□□ -1.15
VPS28YPL065W TRS120Q04183 1289 aa7.87□□□□□ -1.15
VPS28YPL065W YMR074CQ04773 145 aa7.87□□□□□ -1.15
VPS28YPL065W GIC2Q06648 383 aa7.87□□□□□ -1.15
VPS28YPL065W YNL011CP53980 444 aa7.86□□□□□ -1.15
VPS28YPL065W YOR223WQ12015 292 aa7.86□□□□□ -1.15
VPS28YPL065W CDC3P32457 520 aaKnown RBP7.85□□□□□ -1.15
VPS28YPL065W GCV1P48015 400 aa7.85□□□□□ -1.15
VPS28YPL065W BRE4Q07660 1125 aa7.85□□□□□ -1.15
VPS28YPL065W BSC2Q05611 235 aa7.84□□□□□ -1.15
VPS28YPL065W NPR1P22211 790 aa7.83□□□□□ -1.16
VPS28YPL065W CDC55Q00362 526 aa7.83□□□□□ -1.16
VPS28YPL065W RIM11P38615 370 aa7.82□□□□□ -1.16
VPS28YPL065W IRC24P40580 263 aa7.82□□□□□ -1.16
VPS28YPL065W MAG2Q06436 670 aaKnown RBP7.82□□□□□ -1.16
VPS28YPL065W YIG1Q08956 461 aa7.82□□□□□ -1.16
VPS28YPL065W MSH6Q03834 1242 aa7.81□□□□□ -1.16
VPS28YPL065W NSI1Q12457 570 aa7.81□□□□□ -1.16
VPS28YPL065W YHL008CP38750 627 aa7.8□□□□□ -1.16
VPS28YPL065W CTH1P47976 325 aa7.8□□□□□ -1.16
VPS28YPL065W CMR1Q12510 522 aaKnown RBP7.8□□□□□ -1.16
VPS28YPL065W COBP00163 385 aa7.79□□□□□ -1.16
VPS28YPL065W HTS1P07263 546 aaKnown RBP7.79□□□□□ -1.16
VPS28YPL065W PRP5P21372 849 aaPredicted RBP7.79□□□□□ -1.16
VPS28YPL065W MMM1P41800 426 aa7.79□□□□□ -1.16
VPS28YPL065W NOP8Q08287 484 aaPredicted RBP7.79□□□□□ -1.16
VPS28YPL065W TRL1P09880 827 aaKnown RBP7.78□□□□□ -1.16
VPS28YPL065W AVT1P47082 602 aa7.78□□□□□ -1.16
VPS28YPL065W DOT1Q04089 582 aaKnown RBP7.78□□□□□ -1.16
VPS28YPL065W YOR059CQ08448 450 aaKnown RBP7.78□□□□□ -1.16
VPS28YPL065W GRS1P38088 690 aaKnown RBP7.77□□□□□ -1.17
VPS28YPL065W CIT3P43635 486 aa7.77□□□□□ -1.17
VPS28YPL065W MEC3Q02574 474 aa7.77□□□□□ -1.17
VPS28YPL065W PMT7Q06644 662 aa7.77□□□□□ -1.17
VPS28YPL065W MNL2Q12205 849 aa7.77□□□□□ -1.17
VPS28YPL065W HAT1Q12341 374 aa7.77□□□□□ -1.17
VPS28YPL065W FLP1P03870 423 aa7.76□□□□□ -1.17
VPS28YPL065W GPT2P36148 743 aa7.76□□□□□ -1.17
VPS28YPL065W UTP22P53254 1237 aaPredicted RBP7.76□□□□□ -1.17
VPS28YPL065W YBL113CQ7M4S9 792 aa7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms