RNA–Protein interactions for RNA: YOL147C

PEX11, Transcript of Peroxisomal protein required for medium-chain fatty acid oxidation, yeast

Gene PEX11, Length 711 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX11	YOL147C	TSC13	Q99190	310 aa		4.13	□□□□□ -1.75
PEX11	YOL147C	RPT2	P40327	437 aa	Known RBP	4.12	□□□□□ -1.75
PEX11	YOL147C	SUM1	P46676	1062 aa		4.12	□□□□□ -1.75
PEX11	YOL147C	VTC4	P47075	721 aa		4.12	□□□□□ -1.75
PEX11	YOL147C	YGL081W	P53156	320 aa		4.12	□□□□□ -1.75
PEX11	YOL147C	CWC22	P53333	577 aa	Known RBP	4.12	□□□□□ -1.75
PEX11	YOL147C	COG4	Q06096	861 aa		4.12	□□□□□ -1.75
PEX11	YOL147C	WRS1	Q12109	432 aa	Known RBP	4.12	□□□□□ -1.75
PEX11	YOL147C	NKP1	Q12493	238 aa		4.12	□□□□□ -1.75
PEX11	YOL147C	THS1	P04801	734 aa	Known RBP	4.11	□□□□□ -1.75
PEX11	YOL147C	MET6	P05694	767 aa	Known RBP	4.11	□□□□□ -1.75
PEX11	YOL147C	TRX2	P22803	104 aa	Known RBP	4.11	□□□□□ -1.75
PEX11	YOL147C	SLA1	P32790	1244 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	NTH2	P35172	780 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	SHM1	P37292	490 aa	Predicted RBP	4.11	□□□□□ -1.75
PEX11	YOL147C	GLO3	P38682	493 aa	Known RBP	4.11	□□□□□ -1.75
PEX11	YOL147C	NOC2	P39744	710 aa	Known RBP	4.11	□□□□□ -1.75
PEX11	YOL147C	POL5	P39985	1022 aa	Known RBP	4.11	□□□□□ -1.75
PEX11	YOL147C	QDR1	P40475	563 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	YFL034W	P43564	1073 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	YJL049W	P47048	450 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	MTO1	P53070	669 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	CUZ1	P53899	274 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	ENT2	Q05785	613 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	GAS4	Q08271	471 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	YOR131C	Q12486	218 aa		4.11	□□□□□ -1.75
PEX11	YOL147C	CYT1	P07143	309 aa		4.1	□□□□□ -1.75
PEX11	YOL147C	HAP4	P14064	554 aa		4.1	□□□□□ -1.75
PEX11	YOL147C	UBP1	P25037	809 aa		4.1	□□□□□ -1.75
PEX11	YOL147C	TIM23	P32897	222 aa		4.1	□□□□□ -1.75
PEX11	YOL147C	VPS24	P36095	224 aa	Known RBP	4.1	□□□□□ -1.75
PEX11	YOL147C	VPS27	P40343	622 aa	Known RBP	4.1	□□□□□ -1.75
PEX11	YOL147C	MSH4	P40965	878 aa	Predicted RBP	4.1	□□□□□ -1.75
PEX11	YOL147C	JJJ2	P46997	583 aa		4.1	□□□□□ -1.75
PEX11	YOL147C	MSN5	P52918	1224 aa		4.1	□□□□□ -1.75
PEX11	YOL147C	PNP1	Q05788	311 aa		4.1	□□□□□ -1.75
PEX11	YOL147C	DAL1	P32375	460 aa		4.09	□□□□□ -1.75
PEX11	YOL147C	BOI1	P38041	980 aa	Known RBP	4.09	□□□□□ -1.75
PEX11	YOL147C	NUP82	P40368	713 aa		4.09	□□□□□ -1.75
PEX11	YOL147C	ITC1	P53125	1264 aa		4.09	□□□□□ -1.75
PEX11	YOL147C	CEF1	Q03654	590 aa	Predicted RBP	4.09	□□□□□ -1.75
PEX11	YOL147C	PUF6	Q04373	656 aa	Known RBP	4.09	□□□□□ -1.75
PEX11	YOL147C	ESF1	Q06344	628 aa	Known RBP	4.09	□□□□□ -1.75
PEX11	YOL147C	PPM2	Q08282	695 aa		4.09	□□□□□ -1.75
PEX11	YOL147C	AI1	P03875	834 aa		4.08	□□□□□ -1.76
PEX11	YOL147C	MCM1	P11746	286 aa		4.08	□□□□□ -1.76
PEX11	YOL147C	PWP2	P25635	923 aa	Known RBP	4.08	□□□□□ -1.76
PEX11	YOL147C	RPT1	P33299	467 aa	Known RBP	4.08	□□□□□ -1.76
PEX11	YOL147C	CEM1	P39525	442 aa		4.08	□□□□□ -1.76
PEX11	YOL147C	YFL066C	P43538	392 aa		4.08	□□□□□ -1.76
PEX11	YOL147C	HUL5	P53119	910 aa		4.08	□□□□□ -1.76
PEX11	YOL147C	FOL1	P53848	824 aa		4.08	□□□□□ -1.76
PEX11	YOL147C	YNL165W	P53891	406 aa		4.08	□□□□□ -1.76
PEX11	YOL147C	FOX2	Q02207	900 aa	Known RBP	4.08	□□□□□ -1.76
PEX11	YOL147C	FUR4	P05316	633 aa	Known RBP	4.07	□□□□□ -1.76
PEX11	YOL147C	CLN2	P20438	545 aa		4.07	□□□□□ -1.76
PEX11	YOL147C	SRM1	P21827	482 aa		4.07	□□□□□ -1.76
PEX11	YOL147C	RAD27	P26793	382 aa		4.07	□□□□□ -1.76
PEX11	YOL147C	SUV3	P32580	737 aa		4.07	□□□□□ -1.76
PEX11	YOL147C	AHP1	P38013	176 aa	Known RBP	4.07	□□□□□ -1.76
PEX11	YOL147C	CRP1	P38845	465 aa	Known RBP	4.07	□□□□□ -1.76
PEX11	YOL147C	TAT2	P38967	592 aa		4.07	□□□□□ -1.76
PEX11	YOL147C	RPS31	P05759	152 aa	Known RBP	4.06	□□□□□ -1.76
PEX11	YOL147C	PHO8	P11491	566 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	RPN12	P32496	274 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	PEP7	P32609	515 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	NFU1	P32860	256 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	RPS0A	P32905	252 aa	Known RBP	4.06	□□□□□ -1.76
PEX11	YOL147C	ALA1	P40825	983 aa	Known RBP	4.06	□□□□□ -1.76
PEX11	YOL147C	DAK2	P43550	591 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	ACF4	P47129	309 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	PEX8	P53248	589 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	UTP14	Q04500	899 aa	Known RBP	4.06	□□□□□ -1.76
PEX11	YOL147C	PUN1	Q06991	263 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	PSH1	Q12161	406 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	ERP4	Q12450	207 aa		4.06	□□□□□ -1.76
PEX11	YOL147C	SRS2	P12954	1174 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	RAD4	P14736	754 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	DAL5	P15365	543 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	PDC6	P26263	563 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	IRE1	P32361	1115 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	NGR1	P32831	672 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	MFT1	P33441	392 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	HXT5	P38695	592 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	RPS26A	P39938	119 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	RPS26B	P39939	119 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	CCT8	P47079	568 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	UBP15	P50101	1230 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	ESF2	P53743	316 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	CWC24	P53769	259 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	YMR265C	Q03508	461 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	SPO20	Q04359	397 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	GPI13	Q07830	1017 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	RLP24	Q07915	199 aa	Known RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	YOR378W	Q08902	515 aa		4.05	□□□□□ -1.76
PEX11	YOL147C	SNU66	Q12420	587 aa	Predicted RBP	4.05	□□□□□ -1.76
PEX11	YOL147C	PHO4	P07270	312 aa	Known RBP	4.04	□□□□□ -1.76
PEX11	YOL147C	VAN1	P23642	535 aa		4.04	□□□□□ -1.76
PEX11	YOL147C	GRX1	P25373	110 aa	Known RBP	4.04	□□□□□ -1.76
PEX11	YOL147C	MRC1	P25588	1096 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms