RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	PTK1	P36002	662 aa	Predicted RBP	13.68	□□□□□ -0.22
CUE1	YMR264W	BOI1	P38041	980 aa	Known RBP	13.68	□□□□□ -0.22
CUE1	YMR264W	RKM3	P38222	552 aa		13.68	□□□□□ -0.22
CUE1	YMR264W	UBX2	Q04228	584 aa		13.68	□□□□□ -0.22
CUE1	YMR264W	EST2	Q06163	884 aa		13.68	□□□□□ -0.22
CUE1	YMR264W	RDS1	P25611	832 aa		13.67	□□□□□ -0.22
CUE1	YMR264W	UBP10	P53874	792 aa	Predicted RBP	13.67	□□□□□ -0.22
CUE1	YMR264W	ERO1	Q03103	563 aa		13.67	□□□□□ -0.22
CUE1	YMR264W	YLR407W	Q06070	228 aa		13.67	□□□□□ -0.22
CUE1	YMR264W	SMY1	P32364	656 aa	Known RBP	13.66	□□□□□ -0.22
CUE1	YMR264W	RFC5	P38251	354 aa		13.66	□□□□□ -0.22
CUE1	YMR264W	EPL1	P43572	832 aa		13.66	□□□□□ -0.22
CUE1	YMR264W	YFH7	P43591	353 aa		13.66	□□□□□ -0.22
CUE1	YMR264W	ETT1	Q08421	412 aa	Known RBP	13.66	□□□□□ -0.22
CUE1	YMR264W	PSF3	Q12146	194 aa		13.66	□□□□□ -0.22
CUE1	YMR264W	PRI1	P10363	409 aa		13.65	□□□□□ -0.22
CUE1	YMR264W	FRS2	P15625	503 aa	Known RBP	13.65	□□□□□ -0.22
CUE1	YMR264W	MAL33	P38157	468 aa		13.65	□□□□□ -0.22
CUE1	YMR264W	UFD2	P54860	961 aa		13.65	□□□□□ -0.22
CUE1	YMR264W	CHO2	P05374	869 aa	Known RBP	13.64	□□□□□ -0.23
CUE1	YMR264W	MDL2	P33311	773 aa		13.64	□□□□□ -0.23
CUE1	YMR264W	RPS15	Q01855	142 aa	Known RBP	13.64	□□□□□ -0.23
CUE1	YMR264W	MPH3	P0CE00	602 aa		13.63	□□□□□ -0.23
CUE1	YMR264W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.63	□□□□□ -0.23	not detected
CUE1	YMR264W	JJJ2	P46997	583 aa		13.63	□□□□□ -0.23
CUE1	YMR264W	DIT2	P21595	489 aa		13.61	□□□□□ -0.23
CUE1	YMR264W	AKR1	P39010	764 aa		13.61	□□□□□ -0.23
CUE1	YMR264W	MSN5	P52918	1224 aa		13.61	□□□□□ -0.23
CUE1	YMR264W	TOS4	Q06266	489 aa		13.61	□□□□□ -0.23
CUE1	YMR264W	PIP2	P52960	996 aa		13.6	□□□□□ -0.23
CUE1	YMR264W	MRD1	Q06106	887 aa	Known RBP	13.6	□□□□□ -0.23
CUE1	YMR264W	DDP1	Q99321	188 aa	Known RBP	13.6	□□□□□ -0.23
CUE1	YMR264W	HSP82	P02829	709 aa	Known RBP	13.59	□□□□□ -0.23
CUE1	YMR264W	HCA4	P20448	770 aa	Known RBP	13.59	□□□□□ -0.23
CUE1	YMR264W	RET1	P22276	1149 aa	Known RBP	13.59	□□□□□ -0.23
CUE1	YMR264W	ERT1	P38140	529 aa		13.59	□□□□□ -0.23
CUE1	YMR264W	NPR3	P38742	1146 aa		13.59	□□□□□ -0.23
CUE1	YMR264W	RPN10	P38886	268 aa	Known RBP	13.59	□□□□□ -0.23
CUE1	YMR264W	RTS1	P38903	757 aa		13.59	□□□□□ -0.23
CUE1	YMR264W	TFC6	Q06339	672 aa		13.59	□□□□□ -0.23
CUE1	YMR264W	WRS1	Q12109	432 aa	Known RBP	13.59	□□□□□ -0.23
CUE1	YMR264W	GRX6	Q12438	231 aa		13.59	□□□□□ -0.23
CUE1	YMR264W	SNF3	P10870	884 aa		13.58	□□□□□ -0.24
CUE1	YMR264W	PGI1	P12709	554 aa	Known RBP	13.58	□□□□□ -0.24
CUE1	YMR264W	ANP1	P32629	500 aa		13.58	□□□□□ -0.24
CUE1	YMR264W	YHL050C	P38721	697 aa		13.58	□□□□□ -0.24
CUE1	YMR264W	HDA1	P53973	706 aa		13.58	□□□□□ -0.24
CUE1	YMR264W	TRS33	Q99394	268 aa		13.58	□□□□□ -0.24
CUE1	YMR264W	FLO1	P32768	1537 aa		13.58	□□□□□ -0.24
CUE1	YMR264W	CBP3	P21560	335 aa		13.57	□□□□□ -0.24
CUE1	YMR264W	SET4	P42948	560 aa		13.57	□□□□□ -0.24
CUE1	YMR264W	ISW2	Q08773	1120 aa		13.57	□□□□□ -0.24
CUE1	YMR264W	TAF13	P11747	167 aa		13.56	□□□□□ -0.24
CUE1	YMR264W	BMH2	P34730	273 aa	Known RBP	13.56	□□□□□ -0.24
CUE1	YMR264W	YKL222C	P35995	705 aa		13.56	□□□□□ -0.24
CUE1	YMR264W	MYO3	P36006	1272 aa		13.56	□□□□□ -0.24
CUE1	YMR264W	MIC60	P36112	540 aa		13.56	□□□□□ -0.24
CUE1	YMR264W	PTK2	P47116	818 aa	Known RBP	13.56	□□□□□ -0.24
CUE1	YMR264W	SGD1	Q06132	899 aa		13.56	□□□□□ -0.24
CUE1	YMR264W	SWI4	P25302	1093 aa	Known RBP	13.55	□□□□□ -0.24
CUE1	YMR264W	GSM1	P42950	618 aa		13.55	□□□□□ -0.24
CUE1	YMR264W	YPL260W	Q08977	551 aa		13.55	□□□□□ -0.24
CUE1	YMR264W	MRPL10	P36520	322 aa		13.54	□□□□□ -0.24
CUE1	YMR264W	RFT1	P38206	574 aa	Predicted RBP	13.54	□□□□□ -0.24
CUE1	YMR264W	MSH4	P40965	878 aa	Predicted RBP	13.54	□□□□□ -0.24
CUE1	YMR264W	APL6	P46682	809 aa		13.54	□□□□□ -0.24
CUE1	YMR264W	YPT11	P48559	417 aa		13.54	□□□□□ -0.24
CUE1	YMR264W	PRP42	Q03776	544 aa	Known RBP	13.54	□□□□□ -0.24
CUE1	YMR264W	ARG82	P07250	355 aa		13.53	□□□□□ -0.24
CUE1	YMR264W	GPA1	P08539	472 aa		13.53	□□□□□ -0.24
CUE1	YMR264W	TIF4632	P39936	914 aa	Known RBP	13.53	□□□□□ -0.24
CUE1	YMR264W	YER130C	P39959	443 aa		13.53	□□□□□ -0.24
CUE1	YMR264W	RAD61	Q99359	647 aa		13.53	□□□□□ -0.24
CUE1	YMR264W	HXK1	P04806	485 aa	Known RBP	13.52	□□□□□ -0.25
CUE1	YMR264W	MAK31	P23059	88 aa		13.52	□□□□□ -0.25
CUE1	YMR264W	RIT1	P23796	513 aa		13.52	□□□□□ -0.25
CUE1	YMR264W	MCM2	P29469	868 aa		13.52	□□□□□ -0.25
CUE1	YMR264W	ATE1	P16639	503 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	RGP1	P16664	663 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	MAL31	P38156	614 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	VID27	P40157	782 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	CSM2	P40465	213 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	ALG2	P43636	503 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	EAF6	P47128	113 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	PUS6	P53294	404 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	NSG2	P53898	299 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	SSL2	Q00578	843 aa		13.51	□□□□□ -0.25
CUE1	YMR264W	VMS1	Q04311	632 aa	Known RBP	13.51	□□□□□ -0.25
CUE1	YMR264W	CTT1	P06115	562 aa		13.5	□□□□□ -0.25
CUE1	YMR264W	YKT6	P36015	200 aa	Known RBP	13.5	□□□□□ -0.25
CUE1	YMR264W	FAR11	P53917	953 aa		13.5	□□□□□ -0.25
CUE1	YMR264W	DCS2	Q12123	353 aa		13.5	□□□□□ -0.25
CUE1	YMR264W	YOR111W	Q99210	232 aa		13.5	□□□□□ -0.25
CUE1	YMR264W	CDC6	P09119	513 aa		13.49	□□□□□ -0.25
CUE1	YMR264W	RRM3	P38766	723 aa		13.49	□□□□□ -0.25
CUE1	YMR264W	GDE1	Q02979	1223 aa		13.49	□□□□□ -0.25
CUE1	YMR264W	GAS5	Q08193	484 aa		13.49	□□□□□ -0.25
CUE1	YMR264W	GET3	Q12154	354 aa	Known RBP	13.49	□□□□□ -0.25
CUE1	YMR264W	RNR3	P21672	869 aa	Known RBP	13.48	□□□□□ -0.25
CUE1	YMR264W	YKU70	P32807	602 aa		13.48	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms