RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W PAN5P38787 379 aa3.21□□□□□ -1.9
SPT21YMR179W BOL3P39724 118 aa3.21□□□□□ -1.9
SPT21YMR179W YLR122CQ12312 125 aa3.21□□□□□ -1.9
SPT21YMR179W HVG1P0CE11 249 aa3.2□□□□□ -1.9
SPT21YMR179W OMA1P36163 345 aa3.2□□□□□ -1.9
SPT21YMR179W LEM3P42838 414 aa3.2□□□□□ -1.9
SPT21YMR179W TIF6Q12522 245 aaKnown RBP3.2□□□□□ -1.9
SPT21YMR179W TRP3P00937 484 aa3.19□□□□□ -1.9
SPT21YMR179W YKR073CP36153 106 aa3.19□□□□□ -1.9
SPT21YMR179W RAD55P38953 406 aa3.19□□□□□ -1.9
SPT21YMR179W POL5P39985 1022 aaKnown RBP3.19□□□□□ -1.9
SPT21YMR179W REC8Q12188 680 aa3.19□□□□□ -1.9
SPT21YMR179W COQ2P32378 372 aa3.19□□□□□ -1.9
SPT21YMR179W KAE1P36132 386 aa3.19□□□□□ -1.9
SPT21YMR179W SAF1P38352 637 aa3.19□□□□□ -1.9
SPT21YMR179W PSY2P40164 858 aa3.19□□□□□ -1.9
SPT21YMR179W SMC1P32908 1225 aa3.18□□□□□ -1.9
SPT21YMR179W IRS4P36115 615 aaKnown RBP3.18□□□□□ -1.9
SPT21YMR179W YNR065CP53751 1116 aa3.18□□□□□ -1.9
SPT21YMR179W RLF2Q12495 606 aa3.18□□□□□ -1.9
SPT21YMR179W FUR4P05316 633 aaKnown RBP3.18□□□□□ -1.9
SPT21YMR179W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SPT21YMR179W MED7Q08278 222 aa3.18□□□□□ -1.9
SPT21YMR179W GLO4Q12320 285 aa3.18□□□□□ -1.9
SPT21YMR179W NAM7P30771 971 aaKnown RBP3.17□□□□□ -1.9
SPT21YMR179W YJR124CP47159 448 aa3.17□□□□□ -1.9
SPT21YMR179W NCE103P53615 221 aa3.17□□□□□ -1.9
SPT21YMR179W PYC2P32327 1180 aaKnown RBP3.17□□□□□ -1.9
SPT21YMR179W CTH1P47976 325 aa3.17□□□□□ -1.9
SPT21YMR179W CTR9P89105 1077 aa3.17□□□□□ -1.9
SPT21YMR179W SPO71Q03868 1245 aa3.17□□□□□ -1.9
SPT21YMR179W MAE1P36013 669 aaKnown RBP3.16□□□□□ -1.9
SPT21YMR179W AKR1P39010 764 aa3.16□□□□□ -1.9
SPT21YMR179W HAS1Q03532 505 aaKnown RBP3.16□□□□□ -1.9
SPT21YMR179W ELG1Q12050 791 aa3.16□□□□□ -1.9
SPT21YMR179W CHS2P14180 963 aa3.16□□□□□ -1.9
SPT21YMR179W ERS1P17261 260 aa3.16□□□□□ -1.9
SPT21YMR179W COBP00163 385 aa3.15□□□□□ -1.91
SPT21YMR179W PUB1P32588 453 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SPT21YMR179W TOS1P38288 455 aa3.15□□□□□ -1.91
SPT21YMR179W YGR130CP53278 816 aa3.15□□□□□ -1.91
SPT21YMR179W NEO1P40527 1151 aa3.14□□□□□ -1.91
SPT21YMR179W RSC4Q02206 625 aa3.14□□□□□ -1.91
SPT21YMR179W SPO74P45819 413 aa3.14□□□□□ -1.91
SPT21YMR179W FET4P40988 552 aa3.13□□□□□ -1.91
SPT21YMR179W KIP3P53086 805 aaKnown RBP3.13□□□□□ -1.91
SPT21YMR179W MAG2Q06436 670 aaKnown RBP3.13□□□□□ -1.91
SPT21YMR179W BRE4Q07660 1125 aa3.13□□□□□ -1.91
SPT21YMR179W CYC7P00045 113 aa3.13□□□□□ -1.91
SPT21YMR179W QDR1P40475 563 aa3.13□□□□□ -1.91
SPT21YMR179W ATG1P53104 897 aa3.13□□□□□ -1.91
SPT21YMR179W UFD2P54860 961 aa3.13□□□□□ -1.91
SPT21YMR179W KAR5Q04746 504 aa3.13□□□□□ -1.91
SPT21YMR179W MSB1P21339 1137 aaKnown RBP3.12□□□□□ -1.91
SPT21YMR179W LIP5P32875 414 aa3.12□□□□□ -1.91
SPT21YMR179W DUR3P33413 735 aa3.12□□□□□ -1.91
SPT21YMR179W RIM11P38615 370 aa3.12□□□□□ -1.91
SPT21YMR179W GLO3P38682 493 aaKnown RBP3.12□□□□□ -1.91
SPT21YMR179W MNL2Q12205 849 aa3.12□□□□□ -1.91
SPT21YMR179W PRP5P21372 849 aaPredicted RBP3.12□□□□□ -1.91
SPT21YMR179W CMR1Q12510 522 aaKnown RBP3.12□□□□□ -1.91
SPT21YMR179W TRL1P09880 827 aaKnown RBP3.11□□□□□ -1.91
SPT21YMR179W SEA4P38164 1038 aa3.11□□□□□ -1.91
SPT21YMR179W IRC24P40580 263 aa3.11□□□□□ -1.91
SPT21YMR179W AVT1P47082 602 aa3.11□□□□□ -1.91
SPT21YMR179W ACF4P47129 309 aa3.11□□□□□ -1.91
SPT21YMR179W FAR11P53917 953 aa3.11□□□□□ -1.91
SPT21YMR179W GIC2Q06648 383 aa3.11□□□□□ -1.91
SPT21YMR179W NPR1P22211 790 aa3.1□□□□□ -1.91
SPT21YMR179W RPL34AP87262 121 aaPredicted RBP3.1□□□□□ -1.91
SPT21YMR179W MSH6Q03834 1242 aa3.1□□□□□ -1.91
SPT21YMR179W YOR223WQ12015 292 aa3.1□□□□□ -1.91
SPT21YMR179W TRS120Q04183 1289 aa3.1□□□□□ -1.91
SPT21YMR179W YIG1Q08956 461 aa3.1□□□□□ -1.91
SPT21YMR179W HTS1P07263 546 aaKnown RBP3.09□□□□□ -1.91
SPT21YMR179W SAP155P43612 1002 aa3.09□□□□□ -1.91
SPT21YMR179W GCV1P48015 400 aa3.09□□□□□ -1.91
SPT21YMR179W GCD1P09032 578 aaPredicted RBP3.09□□□□□ -1.92
SPT21YMR179W ELM1P32801 640 aa3.09□□□□□ -1.92
SPT21YMR179W YNL011CP53980 444 aa3.09□□□□□ -1.92
SPT21YMR179W SSA1P10591 642 aaKnown RBP3.08□□□□□ -1.92
SPT21YMR179W GPT2P36148 743 aa3.08□□□□□ -1.92
SPT21YMR179W CDC55Q00362 526 aa3.08□□□□□ -1.92
SPT21YMR179W SDH1Q00711 640 aa3.08□□□□□ -1.92
SPT21YMR179W AOS1Q06624 347 aa3.08□□□□□ -1.92
SPT21YMR179W FLP1P03870 423 aa3.08□□□□□ -1.92
SPT21YMR179W YMR074CQ04773 145 aa3.08□□□□□ -1.92
SPT21YMR179W BSC2Q05611 235 aa3.08□□□□□ -1.92
SPT21YMR179W MMM1P41800 426 aa3.07□□□□□ -1.92
SPT21YMR179W MDJ2P42834 146 aa3.07□□□□□ -1.92
SPT21YMR179W MEC3Q02574 474 aa3.07□□□□□ -1.92
SPT21YMR179W DOT1Q04089 582 aaKnown RBP3.07□□□□□ -1.92
SPT21YMR179W WHI3P34761 661 aaKnown RBP3.07□□□□□ -1.92
SPT21YMR179W GPI13Q07830 1017 aa3.07□□□□□ -1.92
SPT21YMR179W YLL054CQ12244 843 aa3.07□□□□□ -1.92
SPT21YMR179W ECM2P38241 364 aaKnown RBP3.06□□□□□ -1.92
SPT21YMR179W CIT3P43635 486 aa3.06□□□□□ -1.92
SPT21YMR179W NUT1P53114 1132 aa3.06□□□□□ -1.92
SPT21YMR179W UTP22P53254 1237 aaPredicted RBP3.06□□□□□ -1.92
SPT21YMR179W CDC3P32457 520 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms