RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C YPL260WQ08977 551 aa2.96□□□□□ -1.94
YMR050CYMR050C TGL5Q12043 749 aa2.96□□□□□ -1.94
YMR050CYMR050C NCR1Q12200 1170 aa2.96□□□□□ -1.94
YMR050CYMR050C JIP3O13555 125 aa2.96□□□□□ -1.94
YMR050CYMR050C YBR287WP38355 427 aa2.96□□□□□ -1.94
YMR050CYMR050C TFB4Q12004 338 aa2.96□□□□□ -1.94
YMR050CYMR050C HSP82P02829 709 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C SRP40P32583 406 aaPredicted RBP2.95□□□□□ -1.94
YMR050CYMR050C RPS0BP46654 252 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C MSB3P48566 633 aaPredicted RBP2.95□□□□□ -1.94
YMR050CYMR050C ATG38Q05789 226 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C CDC45Q08032 650 aa2.95□□□□□ -1.94
YMR050CYMR050C SSF2Q12153 453 aaPredicted RBP2.95□□□□□ -1.94
YMR050CYMR050C ADE6P38972 1358 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C SSK22P25390 1331 aaPredicted RBP2.95□□□□□ -1.94
YMR050CYMR050C PMA1P05030 918 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C VMA2P16140 517 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C RET1P22276 1149 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C CMK1P27466 446 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C SSP1P38871 571 aa2.95□□□□□ -1.94
YMR050CYMR050C SHC1P39000 512 aa2.95□□□□□ -1.94
YMR050CYMR050C GID8P40208 455 aa2.95□□□□□ -1.94
YMR050CYMR050C APC5Q08683 685 aa2.95□□□□□ -1.94
YMR050CYMR050C RSR1P13856 272 aa2.95□□□□□ -1.94
YMR050CYMR050C VMA4P22203 233 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C APN2P38207 520 aa2.95□□□□□ -1.94
YMR050CYMR050C EFM6P53970 246 aa2.95□□□□□ -1.94
YMR050CYMR050C HCR1Q05775 265 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C YCS4Q06156 1176 aa2.95□□□□□ -1.94
YMR050CYMR050C TUM1Q08686 304 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C MSC6Q08818 692 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C RIM20Q12033 661 aa2.95□□□□□ -1.94
YMR050CYMR050C RPS24AP0CX31 135 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C RPS24BP0CX32 135 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C SPT15P13393 240 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C RPL8AP17076 256 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C APL6P46682 809 aa2.95□□□□□ -1.94
YMR050CYMR050C ZPR1P53303 486 aaKnown RBP2.95□□□□□ -1.94
YMR050CYMR050C HAP1P0CE41 1502 aa2.94□□□□□ -1.94
YMR050CYMR050C CDC34P14682 295 aa2.94□□□□□ -1.94
YMR050CYMR050C FRS2P15625 503 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C TTI1P36097 1038 aa2.94□□□□□ -1.94
YMR050CYMR050C CST26P38226 397 aa2.94□□□□□ -1.94
YMR050CYMR050C SMC2P38989 1170 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C HMF1P40037 129 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C MSH4P40965 878 aaPredicted RBP2.94□□□□□ -1.94
YMR050CYMR050C RSM7P47150 247 aa2.94□□□□□ -1.94
YMR050CYMR050C YDR338CQ05497 695 aa2.94□□□□□ -1.94
YMR050CYMR050C CST9Q06032 482 aa2.94□□□□□ -1.94
YMR050CYMR050C CBP1P07252 654 aa2.94□□□□□ -1.94
YMR050CYMR050C MTF2P10849 440 aa2.94□□□□□ -1.94
YMR050CYMR050C SYN8P31377 255 aa2.94□□□□□ -1.94
YMR050CYMR050C SPC110P32380 944 aa2.94□□□□□ -1.94
YMR050CYMR050C GIP1P38229 639 aa2.94□□□□□ -1.94
YMR050CYMR050C ERC1P38767 581 aa2.94□□□□□ -1.94
YMR050CYMR050C YAP5P40574 245 aa2.94□□□□□ -1.94
YMR050CYMR050C YJR079WP47126 109 aa2.94□□□□□ -1.94
YMR050CYMR050C MLC1P53141 149 aa2.94□□□□□ -1.94
YMR050CYMR050C BTN2P53286 410 aa2.94□□□□□ -1.94
YMR050CYMR050C SOL4P53315 255 aa2.94□□□□□ -1.94
YMR050CYMR050C YML083CQ04526 418 aa2.94□□□□□ -1.94
YMR050CYMR050C JIP5Q06214 492 aaPredicted RBP2.94□□□□□ -1.94
YMR050CYMR050C SPO21Q12411 609 aa2.94□□□□□ -1.94
YMR050CYMR050C CLB1P24868 471 aa2.94□□□□□ -1.94
YMR050CYMR050C MCM2P29469 868 aa2.94□□□□□ -1.94
YMR050CYMR050C TFC1P32367 649 aa2.94□□□□□ -1.94
YMR050CYMR050C TBS1P38114 1094 aa2.94□□□□□ -1.94
YMR050CYMR050C RSC8P43609 557 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C NCS6P53088 359 aa2.94□□□□□ -1.94
YMR050CYMR050C ESC8Q08119 714 aa2.94□□□□□ -1.94
YMR050CYMR050C NOP12Q08208 459 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C TY4B-PA0A0B7P3V8 1104 aa2.94□□□□□ -1.94
YMR050CYMR050C COBP00163 385 aa2.94□□□□□ -1.94
YMR050CYMR050C ILS1P09436 1072 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C KRS1P15180 591 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C MIH1P23748 554 aa2.94□□□□□ -1.94
YMR050CYMR050C CDC60P26637 1090 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C PMI40P29952 429 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C RPC37P36121 282 aa2.94□□□□□ -1.94
YMR050CYMR050C TYS1P36421 394 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C FYV8P46949 817 aaKnown RBP2.94□□□□□ -1.94
YMR050CYMR050C HXT13P39924 564 aa2.93□□□□□ -1.94
YMR050CYMR050C YGL082WP53155 381 aa2.93□□□□□ -1.94
YMR050CYMR050C PIB2P53191 635 aa2.93□□□□□ -1.94
YMR050CYMR050C ADY4Q05955 493 aa2.93□□□□□ -1.94
YMR050CYMR050C APL5Q08951 932 aaKnown RBP2.93□□□□□ -1.94
YMR050CYMR050C DEP1P31385 405 aa2.93□□□□□ -1.94
YMR050CYMR050C MFT1P33441 392 aaKnown RBP2.93□□□□□ -1.94
YMR050CYMR050C NUP133P36161 1157 aa2.93□□□□□ -1.94
YMR050CYMR050C HEF3P53978 1044 aaKnown RBP2.93□□□□□ -1.94
YMR050CYMR050C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
YMR050CYMR050C INA17Q02888 182 aa2.93□□□□□ -1.94
YMR050CYMR050C RUD3Q12234 484 aaKnown RBP2.93□□□□□ -1.94
YMR050CYMR050C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
YMR050CYMR050C NIT1P40447 199 aa2.93□□□□□ -1.94
YMR050CYMR050C MAD1P40957 749 aa2.93□□□□□ -1.94
YMR050CYMR050C SPO74P45819 413 aa2.93□□□□□ -1.94
YMR050CYMR050C SEY1Q99287 776 aa2.93□□□□□ -1.94
YMR050CYMR050C PRT1P06103 763 aaKnown RBP2.93□□□□□ -1.94
YMR050CYMR050C PCK1P10963 549 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms