RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C MDJ2P42834 146 aa6.21□□□□□ -1.42
ATG38YLR211C ACF4P47129 309 aa6.21□□□□□ -1.42
ATG38YLR211C SOG2Q08817 791 aa6.21□□□□□ -1.42
ATG38YLR211C SLP1Q12232 587 aa6.21□□□□□ -1.42
ATG38YLR211C COBP00163 385 aa6.2□□□□□ -1.42
ATG38YLR211C AI3P03877 415 aa6.2□□□□□ -1.42
ATG38YLR211C FUS1P11710 512 aa6.2□□□□□ -1.42
ATG38YLR211C PYC2P32327 1180 aaKnown RBP6.2□□□□□ -1.42
ATG38YLR211C LSB6P42951 607 aa6.2□□□□□ -1.42
ATG38YLR211C RSC4Q02206 625 aa6.19□□□□□ -1.42
ATG38YLR211C HAT1Q12341 374 aa6.19□□□□□ -1.42
ATG38YLR211C YBL113CQ7M4S9 792 aa6.19□□□□□ -1.42
ATG38YLR211C HVG1P0CE11 249 aa6.18□□□□□ -1.42
ATG38YLR211C DUR3P33413 735 aa6.18□□□□□ -1.42
ATG38YLR211C UFD2P54860 961 aa6.18□□□□□ -1.42
ATG38YLR211C YPL034WQ03083 165 aa6.18□□□□□ -1.42
ATG38YLR211C TRS120Q04183 1289 aa6.18□□□□□ -1.42
ATG38YLR211C GLO4Q12320 285 aa6.18□□□□□ -1.42
ATG38YLR211C FRT1Q99332 602 aa6.18□□□□□ -1.42
ATG38YLR211C GRS1P38088 690 aaKnown RBP6.17□□□□□ -1.42
ATG38YLR211C PAN5P38787 379 aa6.17□□□□□ -1.42
ATG38YLR211C TY1A-NL1Q12391 440 aaKnown RBP6.17□□□□□ -1.42
ATG38YLR211C SAC7P17121 654 aa6.16□□□□□ -1.42
ATG38YLR211C SFA1P32771 386 aa6.16□□□□□ -1.42
ATG38YLR211C YJR124CP47159 448 aa6.16□□□□□ -1.42
ATG38YLR211C GUP1P53154 560 aa6.16□□□□□ -1.42
ATG38YLR211C YNR065CP53751 1116 aa6.16□□□□□ -1.42
ATG38YLR211C GPI13Q07830 1017 aa6.16□□□□□ -1.42
ATG38YLR211C TAF7Q05021 590 aa6.15□□□□□ -1.42
ATG38YLR211C PGM1P33401 570 aaKnown RBP6.14□□□□□ -1.43
ATG38YLR211C POL5P39985 1022 aaKnown RBP6.14□□□□□ -1.43
ATG38YLR211C ARI1P53111 347 aaKnown RBP6.14□□□□□ -1.43
ATG38YLR211C NUT2Q06213 157 aa6.14□□□□□ -1.43
ATG38YLR211C YNL011CP53980 444 aa6.13□□□□□ -1.43
ATG38YLR211C HAS1Q03532 505 aaKnown RBP6.13□□□□□ -1.43
ATG38YLR211C RIM11P38615 370 aa6.11□□□□□ -1.43
ATG38YLR211C NEO1P40527 1151 aa6.11□□□□□ -1.43
ATG38YLR211C LEM3P42838 414 aa6.11□□□□□ -1.43
ATG38YLR211C DSE4P53753 1117 aa6.11□□□□□ -1.43
ATG38YLR211C CDC55Q00362 526 aa6.11□□□□□ -1.43
ATG38YLR211C CMR1Q12510 522 aaKnown RBP6.1□□□□□ -1.43
ATG38YLR211C ERS1P17261 260 aa6.09□□□□□ -1.43
ATG38YLR211C RSC6P25632 483 aa6.09□□□□□ -1.43
ATG38YLR211C SSF1P38789 453 aaPredicted RBP6.09□□□□□ -1.43
ATG38YLR211C SPO71Q03868 1245 aa6.09□□□□□ -1.43
ATG38YLR211C REC8Q12188 680 aa6.09□□□□□ -1.43
ATG38YLR211C FLP1P03870 423 aa6.08□□□□□ -1.44
ATG38YLR211C SBP1P10080 294 aaKnown RBP6.08□□□□□ -1.44
ATG38YLR211C FET4P40988 552 aa6.08□□□□□ -1.44
ATG38YLR211C NCE103P53615 221 aa6.08□□□□□ -1.44
ATG38YLR211C MSH6Q03834 1242 aa6.08□□□□□ -1.44
ATG38YLR211C BSC2Q05611 235 aa6.08□□□□□ -1.44
ATG38YLR211C ELG1Q12050 791 aa6.08□□□□□ -1.44
ATG38YLR211C GLT1Q12680 2145 aaKnown RBP6.07□□□□□ -1.44
ATG38YLR211C PRP5P21372 849 aaPredicted RBP6.07□□□□□ -1.44
ATG38YLR211C NPR1P22211 790 aa6.07□□□□□ -1.44
ATG38YLR211C NAM7P30771 971 aaKnown RBP6.07□□□□□ -1.44
ATG38YLR211C MAE1P36013 669 aaKnown RBP6.06□□□□□ -1.44
ATG38YLR211C YHL050CP38721 697 aa6.06□□□□□ -1.44
ATG38YLR211C YHR219WP38900 624 aa6.06□□□□□ -1.44
ATG38YLR211C YHL008CP38750 627 aa6.05□□□□□ -1.44
ATG38YLR211C SAP155P43612 1002 aa6.05□□□□□ -1.44
ATG38YLR211C YLR122CQ12312 125 aa6.05□□□□□ -1.44
ATG38YLR211C KIP3P53086 805 aaKnown RBP6.04□□□□□ -1.44
ATG38YLR211C NUT1P53114 1132 aa6.04□□□□□ -1.44
ATG38YLR211C ALO1P54783 526 aaKnown RBP6.04□□□□□ -1.44
ATG38YLR211C INP54Q08227 384 aaKnown RBP6.04□□□□□ -1.44
ATG38YLR211C HTS1P07263 546 aaKnown RBP6.03□□□□□ -1.44
ATG38YLR211C AKR1P39010 764 aa6.03□□□□□ -1.44
ATG38YLR211C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
ATG38YLR211C TRP3P00937 484 aa6.02□□□□□ -1.45
ATG38YLR211C ECM2P38241 364 aaKnown RBP6.02□□□□□ -1.45
ATG38YLR211C SAF1P38352 637 aa6.02□□□□□ -1.45
ATG38YLR211C COQ2P32378 372 aa6.01□□□□□ -1.45
ATG38YLR211C YKR073CP36153 106 aa6.01□□□□□ -1.45
ATG38YLR211C NRD1P53617 575 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
ATG38YLR211C WHI5Q12416 295 aa6.01□□□□□ -1.45
ATG38YLR211C PHO4P07270 312 aaKnown RBP6□□□□□ -1.45
ATG38YLR211C MET4P32389 672 aa6□□□□□ -1.45
ATG38YLR211C INP52P50942 1183 aa6□□□□□ -1.45
ATG38YLR211C MON1P53129 644 aa6□□□□□ -1.45
ATG38YLR211C YAF9P53930 226 aa6□□□□□ -1.45
ATG38YLR211C NOC3Q07896 663 aaPredicted RBP6□□□□□ -1.45
ATG38YLR211C MSC6Q08818 692 aaKnown RBP6□□□□□ -1.45
ATG38YLR211C YIG1Q08956 461 aa6□□□□□ -1.45
ATG38YLR211C KAE1P36132 386 aa5.99□□□□□ -1.45
ATG38YLR211C TOS4Q06266 489 aa5.99□□□□□ -1.45
ATG38YLR211C TY1A-LR4P0C2I8 440 aaKnown RBP5.98□□□□□ -1.45
ATG38YLR211C TY1A-DR6P0CX70 440 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-ER1P0CX71 440 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-LR2P0CX72 440 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-PLP0CX73 440 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-JR1P0CX74 440 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-LR3P0CX75 440 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-ML2P0CX76 440 aa5.98□□□□□ -1.45
ATG38YLR211C PPX1P38698 397 aa5.98□□□□□ -1.45
ATG38YLR211C FAR11P53917 953 aa5.98□□□□□ -1.45
ATG38YLR211C PMT7Q06644 662 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-GR1Q12085 440 aa5.98□□□□□ -1.45
ATG38YLR211C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms