RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W AIM9P40053 627 aaKnown RBP5.43□□□□□ -1.54
SSL1YLR005W PRP5P21372 849 aaPredicted RBP5.42□□□□□ -1.54
SSL1YLR005W AHP1P38013 176 aaKnown RBP5.42□□□□□ -1.54
SSL1YLR005W UGA2P38067 497 aa5.42□□□□□ -1.54
SSL1YLR005W UBP15P50101 1230 aa5.42□□□□□ -1.54
SSL1YLR005W RSF2P46974 1380 aa5.42□□□□□ -1.54
SSL1YLR005W NTH2P35172 780 aa5.42□□□□□ -1.54
SSL1YLR005W ESL2P36168 1195 aa5.42□□□□□ -1.54
SSL1YLR005W SSA1P10591 642 aaKnown RBP5.41□□□□□ -1.54
SSL1YLR005W IRE1P32361 1115 aa5.41□□□□□ -1.54
SSL1YLR005W PEP12P32854 288 aa5.41□□□□□ -1.54
SSL1YLR005W SHM1P37292 490 aaPredicted RBP5.41□□□□□ -1.54
SSL1YLR005W JJJ2P46997 583 aa5.41□□□□□ -1.54
SSL1YLR005W LYS5P50113 272 aa5.41□□□□□ -1.54
SSL1YLR005W RCM1P53972 490 aa5.41□□□□□ -1.54
SSL1YLR005W YMR265CQ03508 461 aaKnown RBP5.41□□□□□ -1.54
SSL1YLR005W YRF1-3P0CX14 1859 aa5.4□□□□□ -1.54
SSL1YLR005W YRF1-7P0CX15 1859 aa5.4□□□□□ -1.54
SSL1YLR005W YRF1-6P53819 1859 aa5.4□□□□□ -1.54
SSL1YLR005W RPS6AP0CX37 236 aaKnown RBP5.4□□□□□ -1.55
SSL1YLR005W RPS6BP0CX38 236 aaPredicted RBP5.4□□□□□ -1.55
SSL1YLR005W RPN11P43588 306 aaKnown RBP5.4□□□□□ -1.55
SSL1YLR005W YJL181WP46987 611 aa5.4□□□□□ -1.55
SSL1YLR005W ALD2P47771 506 aa5.4□□□□□ -1.55
SSL1YLR005W TAF8Q03750 510 aa5.4□□□□□ -1.55
SSL1YLR005W DPH6Q12429 685 aa5.4□□□□□ -1.55
SSL1YLR005W YEF3P16521 1044 aaKnown RBP5.39□□□□□ -1.55
SSL1YLR005W CEM1P39525 442 aa5.39□□□□□ -1.55
SSL1YLR005W DIT1P21623 536 aa5.38□□□□□ -1.55
SSL1YLR005W PRP40P33203 583 aaKnown RBP5.38□□□□□ -1.55
SSL1YLR005W YFL034WP43564 1073 aa5.38□□□□□ -1.55
SSL1YLR005W KRE33P53914 1056 aaKnown RBP5.38□□□□□ -1.55
SSL1YLR005W YPQ2Q06328 317 aa5.38□□□□□ -1.55
SSL1YLR005W TSC13Q99190 310 aa5.38□□□□□ -1.55
SSL1YLR005W APC1P53886 1748 aa5.37□□□□□ -1.55
SSL1YLR005W DOT5P40553 215 aa5.37□□□□□ -1.55
SSL1YLR005W JJJ3P47138 172 aa5.37□□□□□ -1.55
SSL1YLR005W ADE12P80210 433 aaKnown RBP5.37□□□□□ -1.55
SSL1YLR005W RPS31P05759 152 aaKnown RBP5.36□□□□□ -1.55
SSL1YLR005W PPH3P32345 308 aa5.36□□□□□ -1.55
SSL1YLR005W MDJ1P35191 511 aa5.36□□□□□ -1.55
SSL1YLR005W ACS2P52910 683 aaKnown RBP5.36□□□□□ -1.55
SSL1YLR005W PSH1Q12161 406 aa5.36□□□□□ -1.55
SSL1YLR005W SNF2P22082 1703 aa5.35□□□□□ -1.55
SSL1YLR005W YNL165WP53891 406 aa5.35□□□□□ -1.55
SSL1YLR005W FOX2Q02207 900 aaKnown RBP5.35□□□□□ -1.55
SSL1YLR005W SYT1Q06836 1226 aa5.35□□□□□ -1.55
SSL1YLR005W YIL177CP40434 1758 aa5.35□□□□□ -1.55
SSL1YLR005W YJL225CP40889 1758 aa5.35□□□□□ -1.55
SSL1YLR005W PDC6P26263 563 aaKnown RBP5.34□□□□□ -1.55
SSL1YLR005W MRPL16P38064 232 aa5.34□□□□□ -1.55
SSL1YLR005W MTR4P47047 1073 aaKnown RBP5.34□□□□□ -1.55
SSL1YLR005W SLM3Q12093 417 aa5.34□□□□□ -1.55
SSL1YLR005W SPT7P35177 1332 aa5.34□□□□□ -1.56
SSL1YLR005W CYT1P07143 309 aa5.33□□□□□ -1.56
SSL1YLR005W PHO87P25360 923 aa5.33□□□□□ -1.56
SSL1YLR005W SCT1P32784 759 aa5.33□□□□□ -1.56
SSL1YLR005W ENP1P38333 483 aaKnown RBP5.33□□□□□ -1.56
SSL1YLR005W NPR2P39923 615 aa5.33□□□□□ -1.56
SSL1YLR005W PRP43P53131 767 aaKnown RBP5.33□□□□□ -1.56
SSL1YLR005W THI72Q08579 599 aa5.32□□□□□ -1.56
SSL1YLR005W STB3Q12427 513 aa5.32□□□□□ -1.56
SSL1YLR005W Q0182Q9ZZW1 134 aa5.32□□□□□ -1.56
SSL1YLR005W RIM15P43565 1770 aa5.32□□□□□ -1.56
SSL1YLR005W SPE2P21182 396 aa5.31□□□□□ -1.56
SSL1YLR005W YKL133CP36066 463 aa5.31□□□□□ -1.56
SSL1YLR005W TTI1P36097 1038 aa5.31□□□□□ -1.56
SSL1YLR005W LYS4P49367 693 aaPredicted RBP5.31□□□□□ -1.56
SSL1YLR005W LEU2P04173 364 aaPredicted RBP5.3□□□□□ -1.56
SSL1YLR005W GAL2P13181 574 aa5.3□□□□□ -1.56
SSL1YLR005W HAP4P14064 554 aa5.3□□□□□ -1.56
SSL1YLR005W ICP55P40051 511 aa5.3□□□□□ -1.56
SSL1YLR005W ECM23Q02710 187 aa5.3□□□□□ -1.56
SSL1YLR005W MTC5Q03897 1148 aa5.3□□□□□ -1.56
SSL1YLR005W YDR461C-AQ2V2P7 80 aa5.3□□□□□ -1.56
SSL1YLR005W MCM1P11746 286 aa5.29□□□□□ -1.56
SSL1YLR005W FPS1P23900 669 aa5.29□□□□□ -1.56
SSL1YLR005W MLF3P32047 452 aa5.29□□□□□ -1.56
SSL1YLR005W TGL4P36165 910 aa5.29□□□□□ -1.56
SSL1YLR005W CTH1P47976 325 aa5.29□□□□□ -1.56
SSL1YLR005W ROM1P53046 1155 aa5.29□□□□□ -1.56
SSL1YLR005W NSG2P53898 299 aa5.29□□□□□ -1.56
SSL1YLR005W YRF1-4O13559 1382 aa5.29□□□□□ -1.56
SSL1YLR005W AI1P03875 834 aa5.29□□□□□ -1.56
SSL1YLR005W YKR075CP36155 307 aa5.29□□□□□ -1.56
SSL1YLR005W XKS1P42826 600 aa5.29□□□□□ -1.56
SSL1YLR005W MEC3Q02574 474 aa5.29□□□□□ -1.56
SSL1YLR005W YLR419WQ06698 1435 aaKnown RBP5.28□□□□□ -1.56
SSL1YLR005W SIR4P11978 1358 aa5.28□□□□□ -1.56
SSL1YLR005W MLP1Q02455 1875 aaKnown RBP5.28□□□□□ -1.56
SSL1YLR005W COBP00163 385 aa5.28□□□□□ -1.56
SSL1YLR005W LEU1P07264 779 aaKnown RBP5.28□□□□□ -1.56
SSL1YLR005W SIS2P36024 562 aa5.28□□□□□ -1.56
SSL1YLR005W YTA6P40328 754 aa5.28□□□□□ -1.56
SSL1YLR005W SPR3P41901 512 aa5.28□□□□□ -1.56
SSL1YLR005W YFL066CP43538 392 aa5.28□□□□□ -1.56
SSL1YLR005W KIP3P53086 805 aaKnown RBP5.28□□□□□ -1.56
SSL1YLR005W ALD3P54114 506 aa5.28□□□□□ -1.56
SSL1YLR005W GAS4Q08271 471 aa5.28□□□□□ -1.56
SSL1YLR005W SBE2P42223 864 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 74.3 ms